YACFP (Yet Another Convenience Function Package). get_age()
is a fast & accurate tool for measuring fractional years between two dates. stale_package_check()
tries to identify any library()
calls to unused packages.
This package contains all the data and functions used in Generalized Linear Models, 2nd edition, by Jeff Gill and Michelle Torres. Examples to create all models, tables, and plots are included for each data set.
This package provides functions for downloading of geographic data for use in spatial analysis and mapping. The package facilitates access to climate, crops, elevation, land use, soil, species occurrence, accessibility, administrative boundaries and other data.
This package provides a collection of tools which extract a model documentation from GAMS code and comments. In order to use the package you need to install pandoc and pandoc-citeproc first (<https://pandoc.org/>).
This package provides a ggplot2 extension for visualizing Chinaâ s map, offering customizable projections, boundary styles, and buffer zones for thematic maps. Suitable for spatial data analysis and enhancing map visualization with flexible styling options.
This package provides functions to support the ICES Transparent Assessment Framework <https://taf.ices.dk> to organize data, methods, and results used in ICES assessments. ICES is an organization facilitating international collaboration in marine science.
Bayesian estimation of inverse variance weighted (IVW), Burgess et al. (2013) <doi:10.1002/gepi.21758>, and MR-Egger, Bowden et al. (2015) <doi:10.1093/ije/dyv080>, summary data models for Mendelian randomization analyses.
This package implements a generalization of the Cochran-Armitage trend test to multinomial data. In addition to an overall test, multiple testing adjusted p-values for trend in individual outcomes and power calculation is available.
This package provides users to call MATLAB from using the "system" command. Allows users to submit lines of code or MATLAB m files. This is in comparison to R.matlab', which creates a MATLAB server.
This package provides residuals and overdispersion metrics to assess the fit of N-mixture models obtained using the package unmarked'. Details on the methods are given in Knape et al. (2017) <doi:10.1101/194340>.
This package provides a near drop-in replacement for base::Sys.sleep()
that allows more types of input to produce delays in the execution of code and can silence/prevent typical sources of error.
Store and retrieve data from options()
using syntax derived from the here package. potions makes it straightforward to update and retrieve options, either in the workspace or during package development, without overwriting global options.
Functionality to read, recode, and transcode data as used in quantitative language comparison, specifically to deal with multilingual orthographic variation (Moran & Cysouw (2018) <doi:10.5281/zenodo.1296780>) and with the recoding of nominal data.
Given a coro asynchronous generator instance that produces text, write that text into a document selection in RStudio and Positron'. This is particularly helpful for streaming large language model responses into the user's editor.
Simple utilities to design and generate density functions on bounded regions in space and space-time, and simulate independent, identically distributed data therefrom. See Davies & Lawson (2019) <doi:10.1080/00949655.2019.1575066> for example.
Allow to identify motifs in spatial-time series. A motif is a previously unknown subsequence of a (spatial) time series with relevant number of occurrences. For this purpose, the Combined Series Approach (CSA) is used.
This package contains space filling based tools for machine learning and data mining. Some functions offer several computational techniques and deal with the out of memory for large big data by using the ff package.
This package provides functions for fitting MOSAiCS
and MOSAiCS-HMM
, a statistical framework to analyze one-sample or two-sample ChIP-seq
data of transcription factor binding and histone modification.
This package provides methods for visualizing large multivariate datasets using static and interactive scatterplot matrices, parallel coordinate plots, volcano plots, and litre plots. It includes examples for visualizing RNA-sequencing datasets and differentially expressed genes.
Lp_solve is software for solving linear, integer and mixed integer programs. This implementation supplies a "wrapper" function in C and some R functions that solve general linear/integer problems, assignment problems, and transportation problems.
Statistical and biological validation of clustering results. This package implements Dunn Index, Silhouette, Connectivity, Stability, BHI and BSI. Further information can be found in Brock, G et al. (2008) <doi: 10.18637/jss.v025.i04>.
This package provides functions to produce rudimentary ASCII graphics directly in the terminal window. This package provides a basic plotting function (and equivalents of curve, density, acf and barplot) as well as a boxplot function.
RQ (Redis Queue) is a simple Python library for queueing jobs and processing them in the background with workers. It is backed by Redis and it is designed to have a low barrier to entry.
WWTD is a Travis Simulator that lets you run test matrices defined in .travis.yml
on your local machine, using rvm
, rbenv
, or chruby
to test different versions of Ruby.