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FSL is a comprehensive library of analysis tools for FMRI, MRI and diffusion brain imaging data.
This meta-package provides all the FSL modules.
The meshclass module in FSL provides the Mesh class for representing and manipulating 3D models made of triangles, supporting various geometric operations and querie
A library that implement miscellaneous mathematicals methods.
Library or collection of resources supporting FIRST, FSL's tool for automated segmentation of subcortical brain structures, enhancing its functionality and accuracy.
Tool within FSL for FMRIB's Local Analysis of Mixed Effects, used for higher-level analysis of fMRI data, providing robust statistical modeling.
This package is a utility for FSL.
Eddy is a tool within FSL that corrects for eddy current distortions and head movements in diffusion MRI data.
Module within FSL that provides advanced functionalities for noise reduction in MRI data using nonlinear filtering techniques.
A library that encapsulates the reference implementation of the NIfTI format as well as the legacy code necessary to perform I/O operations on NIfTI files.
Verbena is a Bayesian Inference tool for quantification of perfusion and other haemodynamic parameters from Dynamic Susceptibility Contrast perfusion MRI of the brain.
The bet2 module in FSL is a brain extraction tool that removes non-brain tissue from MRI images, aiding in isolating the brain for further analysis.
Collection of miscellaneous C functions and utilities within FSL, providing various helper functions for neuroimaging analysis.
This package is a set of utilities libraries all FSL modules
Tool within FSL for identifying and analyzing clusters in neuroimaging data, particularly useful for statistical thresholding and inference.
A newmat-like wrapper around the Armadillo linear algebra library.
Basisfield is a tool within the FSL (FMRIB Software Library) used to model and correct B0 field inhomogeneities in MRI images, which can cause geometric distortions. It is essential for improving image quality and precision in both clinical and research applications.
Library within FSL for creating and analyzing shape models of brain structures, aiding in morphometric studies and neuroimaging research.
Tool within FSL designed for fieldmap-based correction of geometric distortions in EPI images, crucial for accurate fMRI analysis.
Tool within FSL for automated segmentation of subcortical brain structures from MRI images, aiding neuroscience research.
Eddy is a tool within FSL that corrects for eddy current distortions and head movements in diffusion MRI data.
Topup is a tool within FSL that corrects for susceptibility-induced distortions in echo planar imaging (EPI) data.
FNIRT (FMRIB's Non-linear Image Registration Tool) is a tool for non-linear registration of brain images, used to align images from different subjects or modalities.
This library is likely a component of FSL dedicated to the analysis and visualization of cortical surface data in neuroimaging studies.
FAST4 is an automated segmentation tool in FSL that segments brain images into different tissue types and corrects for bias field inhomogeneities.