Perform scale linking to establish relationships between instruments that measure similar constructs according to the PROsetta Stone methodology, as in Choi, Schalet, Cook, & Cella (2014) <doi:10.1037/a0035768>.

This takes in a series of multi-layer raster files and returns a phenology projection raster, following methodologies described in John (2016) <https://etda.libraries.psu.edu/catalog/13521clj5135>.

This package provides access to the latest Amazon Mechanical Turk ('MTurk') <https://www.mturk.com> Requester API (version 2017â 01â 17'), replacing the now deprecated MTurkR package.

Includes functions to calculate several physicochemical properties and indices for amino-acid sequences as well as to read and plot XVG output files from the GROMACS molecular dynamics package.

An R wrapper for pulling data from the Spotify Web API <https://developer.spotify.com/documentation/web-api/> in bulk, or post items on a Spotify user's playlist.

When a package is loaded, the source repository is checked for new versions and a message is shown in the console indicating whether the package is out of date.

Parse entire folders of non-rectangular xlsx files into a single rectangular and tidy data.frame based on a custom template file defining the column names of the output.

This package provides functions for reading, analysing and plotting river networks. For this package, river networks consist of sections and nodes with associated attributes, e.g. to characterise their morphological, chemical and biological state. The package provides functions to read this data from text files, to analyse the network structure and network paths and regions consisting of sections and nodes that fulfill prescribed criteria, and to plot the river network and associated properties.

Read raw and processed data from acoustic ejection mass spectrometry (AEMS) files produced by the Sciex EchoMS instrument. Includes functions to create interactive reader objects, extract raw intensity measurements, mass spectra, and fully-processed mass-transition intensity areas. Methods for data processing and analysis are described in Rimmer et al. (2025) <doi:10.1021/acs.analchem.5c03730>. Supports both multiple reaction monitoring (MRM) and full-scan (neutral loss and precursor ion) data formats.

Real-time quantitative polymerase chain reaction (qPCR) data by Rutledge et al. (2004) <doi:10.1093/nar/gnh177> in tidy format. The data comprises a six-point, ten-fold dilution series, repeated in five independent runs, for two different amplicons. In each run, each standard concentration is replicated four times. For the original raw data file see the Supplementary Data section: <https://academic.oup.com/nar/article/32/22/e178/2375678#supplementary-data>.

This package provides several metrics for assessing relative importance in linear models. These can be printed, plotted and bootstrapped. The recommended metric is lmg, which provides a decomposition of the model explained variance into non-negative contributions. There is a version of this package available that additionally provides a new and also recommended metric called pmvd. If you are a non-US user, you can download this extended version from Ulrike Groempings web site.

The package r-alevinqc generates quality control reports summarizing the output from an alevin run. The reports can be generated as HTML or PDF files, or as Shiny applications.

This package provides a smooth mapping of multidimensional points into low-dimensional space defined by a self-organizing map. It is designed to work with FlowSOM and flow-cytometry use-cases.

This package provides some low-level utilities to use for R package development. It currently provides managers for multiple package specific options and registries, vignette, unit test and bibtex related utilities.

This package provides an R interface to the QuickJS portable JavaScript engine. The engine is bundled entirely within the package, requiring no external system dependencies beyond a C compiler.

ReadyMedia (formerly known as MiniDLNA) is a simple media server, which serves multimedia content to compatible clients on the network. It aims to be fully compliant with DLNA and UPnP-AV standards.

iSEEtree is an extension of iSEE for the TreeSummarizedExperiment data container. It provides interactive panel designs to explore hierarchical datasets, such as the microbiome and cell lines.

maSigPro is a regression based approach to find genes for which there are significant gene expression profile differences between experimental groups in time course microarray and RNA-Seq experiments.

This package provides functions for preprocessing, automated gating and meta-analysis of cytometry data. It also provides functions that facilitate the collection of cytometry data from the ImmPort database.

This package provides a model for semi-supervised prioritisation of genes integrating network data, phenotypes and additional prior knowledge about TP and TN gene labels from the literature or experts.

Create an interactive visualization to be used for communication purposes. Providing the function for preparing, plotting, and animating the data. Krisanat Anukarnsakulchularp (2023) <https://github.com/KrisanatA/animbook-journal>.

This package provides a function for estimating factor models. Give factor-adjusted statistics, factor-adjusted mean estimation (one-sample test) or factor-adjusted mean difference estimation (two-sample test).

This package provides a build system based on GNU make that creates and maintains (simply) make files in an R session and provides GUI debugging support through Microsoft Visual Code'.

R client to the Binance Public Rest API for data collection on cryptocurrencies, portfolio management and trading: <https://github.com/binance/binance-spot-api-docs/blob/master/rest-api.md>.