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r-polaroid 0.2.1
Propagated dependencies: r-shiny@1.10.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/jhk0530/polaroid
Licenses: Expat
Synopsis: Create Hex Stickers with 'shiny'
Description:

Create hexagonal shape sticker image. polaroid can be used in user's web browser. polaroid can be used in shinyapps.io'. In both way, user can download created hexSticker as PNG image. polaroid is built based on argonDash', colourpicker and hexSticker R package.

r-snapshot 0.1.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=snapshot
Licenses: GPL 2
Synopsis: Gadget N-body cosmological simulation code snapshot I/O utilities
Description:

This package provides functions for reading and writing Gadget N-body snapshots. The Gadget code is popular in astronomy for running N-body / hydrodynamical cosmological and merger simulations. To find out more about Gadget see the main distribution page at www.mpa-garching.mpg.de/gadget/.

r-snowboot 1.0.2
Propagated dependencies: r-rdpack@2.6.4 r-rcpp@1.0.14 r-igraph@2.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=snowboot
Licenses: GPL 3
Synopsis: Bootstrap Methods for Network Inference
Description:

This package provides functions for analysis of network objects, which are imported or simulated by the package. The non-parametric methods of analysis center on snowball and bootstrap sampling for estimating functions of network degree distribution. For other parameters of interest, see, e.g., bootnet package.

r-sipdibge 0.2.1
Propagated dependencies: r-tibble@3.2.1 r-rstudioapi@0.17.1 r-purrr@1.0.4 r-pnsibge@0.2.1 r-png@0.1-8 r-pndsibge@0.1.1 r-pnadcibge@0.7.5 r-covidibge@0.2.2 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SIPDIBGE
Licenses: GPL 3
Synopsis: Collection of Household Survey Packages Conducted by IBGE
Description:

This package provides access to packages developed for downloading, reading and analyzing microdata from household surveys in Integrated System of Household Surveys - SIPD conducted by Brazilian Institute of Geography and Statistics - IBGE. More information can be obtained from the official website <https://www.ibge.gov.br/>.

r-softbart 1.0.2
Propagated dependencies: r-truncnorm@1.0-9 r-scales@1.4.0 r-rcpparmadillo@14.4.3-1 r-rcpp@1.0.14 r-progress@1.2.3 r-mass@7.3-65 r-glmnet@4.1-8 r-caret@7.0-1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SoftBart
Licenses: GPL 2+
Synopsis: Implements the SoftBart Algorithm
Description:

This package implements the SoftBart model of described by Linero and Yang (2018) <doi:10.1111/rssb.12293>, with the optional use of a sparsity-inducing prior to allow for variable selection. For usability, the package maintains the same style as the BayesTree package.

r-typehint 0.1.2
Propagated dependencies: r-stringr@1.5.1 r-rlist@0.4.6.2 r-crayon@1.5.3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/jsugarelli/typehint/
Licenses: GPL 3
Synopsis: Auto-Check Types, Dimensions, and Values of Function Arguments
Description:

Type hints are special comments within a function body indicating the intended nature of the function's arguments in terms of data types, dimensions and permitted values. The actual parameters with which the function is called are evaluated against these type hint comments at run-time.

r-vizdraws 2.0.0
Propagated dependencies: r-stringr@1.5.1 r-magrittr@2.0.3 r-htmlwidgets@1.6.4 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/ignacio82/vizdraws
Licenses: GPL 3
Synopsis: Visualize Draws from the Prior and Posterior Distributions
Description:

Interactive visualization for Bayesian prior and posterior distributions. This package facilitates an animated transition between prior and posterior distributions. Additionally, it splits the distribution into bars based on the provided breaks, displaying the probability for each region. If no breaks are provided, it defaults to zero.

ritornello 2.0.1
Dependencies: samtools@0.1.19 fftw@3.3.10 boost@1.83.0 zlib@1.3
Channel: guix
Location: gnu/packages/bioinformatics.scm (gnu packages bioinformatics)
Home page: https://github.com/KlugerLab/Ritornello
Licenses: GPL 3+
Synopsis: Control-free peak caller for ChIP-seq data
Description:

Ritornello is a ChIP-seq peak calling algorithm based on signal processing that can accurately call binding events without the need to do a pair total DNA input or IgG control sample. It has been tested for use with narrow binding events such as transcription factor ChIP-seq.

r-projpred 2.8.0
Propagated dependencies: r-abind@1.4-8 r-gamm4@0.2-7 r-ggplot2@3.5.2 r-gtools@3.9.5 r-lme4@1.1-37 r-loo@2.8.0 r-mass@7.3-65 r-mclogit@0.9.6 r-mgcv@1.9-3 r-mvtnorm@1.3-3 r-nnet@7.3-20 r-ordinal@2023.12-4.1 r-rcpp@1.0.14 r-rcpparmadillo@14.4.3-1 r-rstantools@2.4.0 r-scales@1.4.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://mc-stan.org/projpred/
Licenses: GPL 3
Synopsis: Projection predictive feature selection
Description:

This package performs projection predictive feature selection for generalized linear models and generalized linear and additive multilevel models. The package is compatible with the rstanarm and brms packages, but other reference models can also be used. See the package vignette for more information and examples.

r-quantreg 6.1
Propagated dependencies: r-mass@7.3-65 r-matrix@1.7-3 r-matrixmodels@0.5-4 r-sparsem@1.84-2 r-survival@3.8-3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://www.r-project.org
Licenses: GPL 2+
Synopsis: Quantile regression
Description:

This package provides an estimation and inference methods for models of conditional quantiles: linear and nonlinear parametric and non-parametric models for conditional quantiles of a univariate response and several methods for handling censored survival data. Portfolio selection methods based on expected shortfall risk are also included.

r-splines2 0.5.4
Propagated dependencies: r-rcpp@1.0.14 r-rcpparmadillo@14.4.3-1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://wwenjie.org/splines2
Licenses: GPL 3+
Synopsis: Regression spline functions and classes
Description:

This package constructs basis functions of B-splines, M-splines, I-splines, convex splines (C-splines), periodic splines, natural cubic splines, generalized Bernstein polynomials, their derivatives, and integrals (except C-splines) by closed-form recursive formulas. It also contains a C++ head-only library integrated with Rcpp.

ruby-log4r 1.1.10
Channel: guix
Location: gnu/packages/ruby-xyz.scm (gnu packages ruby-xyz)
Home page: http://log4r.rubyforge.org/
Licenses: Modified BSD
Synopsis: Flexible logging library for Ruby
Description:

Comprehensive and flexible logging library written in Ruby for use in Ruby programs. It features a hierarchical logging system of any number of levels, custom level names, logger inheritance, multiple output destinations per log event, execution tracing, custom formatting, thread safteyness, XML and YAML configuration, and more.

r-rocpsych 1.4
Propagated dependencies: r-reportroc@3.6 r-proc@1.18.5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=ROCpsych
Licenses: GPL 2+
Synopsis: Compute and Compare Diagnostic Test Statistics Across Groups
Description:

This package provides functions for (1) computing diagnostic test statistics (sensitivity, specificity, etc.) from confusion matrices with adjustment for various base rates or known prevalence based on McCaffrey et al (2003) <doi:10.1007/978-1-4615-0079-7_1>, (2) computing optimal cut-off scores with different criteria including maximizing sensitivity, maximizing specificity, and maximizing the Youden Index from Youden (1950) <doi:10.1002/1097-0142(1950)3:1%3C32::AID-CNCR2820030106%3E3.0.CO;2-3>, and (3) displaying and comparing classification statistics and area under the receiver operating characteristic (ROC) curves or area under the curves (AUC) across consecutive categories for ordinal variables.

r-arcpullr 0.3.0
Propagated dependencies: r-tidyr@1.3.1 r-terra@1.8-50 r-sf@1.0-21 r-rlang@1.1.6 r-raster@3.6-32 r-purrr@1.0.4 r-jsonlite@2.0.0 r-httr@1.4.7 r-ggplot2@3.5.2 r-dt@0.33 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=arcpullr
Licenses: GPL 3
Synopsis: Pull Data from an 'ArcGIS REST' API
Description:

This package provides functions to efficiently query ArcGIS REST APIs <https://developers.arcgis.com/rest/>. Both spatial and SQL queries can be used to retrieve data. Simple Feature (sf) objects are utilized to perform spatial queries. This package was neither produced nor is maintained by Esri.

r-ageutils 0.1.0
Propagated dependencies: r-vctrs@0.6.5 r-tibble@3.2.1 r-rlang@1.1.6
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://timtaylor.github.io/ageutils/
Licenses: GPL 2
Synopsis: Collection of Functions for Working with Age Intervals
Description:

This package provides a collection of efficient functions for working with individual ages and corresponding intervals. These include functions for conversion from an age to an interval, aggregation of ages with associated counts in to intervals and the splitting of interval counts based on specified age distributions.

r-autoharp 0.0.12
Propagated dependencies: r-tibble@3.2.1 r-stringr@1.5.1 r-shiny@1.10.0 r-rmarkdown@2.29 r-rlang@1.1.6 r-pryr@0.1.6 r-magrittr@2.0.3 r-lintr@3.2.0 r-knitr@1.50 r-igraph@2.1.4 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://singator.github.io/autoharp-docs/
Licenses: Expat
Synopsis: Semi-Automatic Grading of R and Rmd Scripts
Description:

This package provides a customisable set of tools for assessing and grading R or R-markdown scripts from students. It allows for checking correctness of code output, runtime statistics and static code analysis. The latter feature is made possible by representing R expressions using a tree structure.

r-bridger2 0.1.0
Propagated dependencies: r-shinydashboard@0.7.3 r-shiny@1.10.0 r-plotly@4.10.4 r-outliers@0.15 r-ggplot2@3.5.2 r-data-table@1.17.4 r-bsda@1.2.2
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=bridger2
Licenses: Expat
Synopsis: Genome-Wide RNA Degradation Analysis Using BRIC-Seq Data
Description:

BRIC-seq is a genome-wide approach for determining RNA stability in mammalian cells. This package provides a series of functions for performing quality check of your BRIC-seq data, calculation of RNA half-life for each transcript and comparison of RNA half-lives between two conditions.

r-ctashiny 0.1.0
Propagated dependencies: r-shinymatrix@0.8.0 r-shiny@1.10.0 r-rpivottable@0.3.0 r-epitools@0.5-10.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=CTAShiny
Licenses: GPL 2
Synopsis: Interactive Application for Working with Contingency Tables
Description:

An interactive application for working with contingency Tables. The application has a template for solving contingency table problems like chisquare test of independence,association plot between two categorical variables. Runtime examples are provided in the package function as well as at <https://jarvisatharva.shinyapps.io/CategoricalDataAnalysis/>.

r-censable 0.0.5
Propagated dependencies: r-tinytiger@0.0.10 r-tibble@3.2.1 r-stringr@1.5.1 r-sf@1.0-21 r-rlang@1.1.6 r-purrr@1.0.4 r-memoise@2.0.1 r-magrittr@2.0.3 r-dplyr@1.1.4 r-censusapi@0.9.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://christophertkenny.com/censable/
Licenses: Expat
Synopsis: Making Census Data More Usable
Description:

This package creates a common framework for organizing, naming, and gathering population, age, race, and ethnicity data from the Census Bureau. Accesses the API <https://www.census.gov/data/developers/data-sets.html>. Provides tools for adding information to existing data to line up with Census data.

r-diceplot 0.2.0
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.2.1 r-sf@1.0-21 r-rlang@1.1.6 r-rcolorbrewer@1.1-3 r-ggrepel@0.9.6 r-ggplot2@3.5.2 r-dplyr@1.1.4 r-data-table@1.17.4 r-cowplot@1.1.3
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://dice-and-domino-plot.readthedocs.io/en/latest/
Licenses: Expat
Synopsis: High Dimensional Categorical Data Visualization
Description:

Easy visualization for datasets with more than two categorical variables and additional continuous variables. diceplot is particularly useful for exploring complex categorical data in the context of pathway analysis across multiple conditions. For a detailed documentation please visit <https://dice-and-domino-plot.readthedocs.io/en/latest/>.

r-exreport 0.4.1
Propagated dependencies: r-reshape2@1.4.4 r-ggplot2@3.5.2
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=exreport
Licenses: GPL 2
Synopsis: Fast, Reliable and Elegant Reproducible Research
Description:

Analysis of experimental results and automatic report generation in both interactive HTML and LaTeX. This package ships with a rich interface for data modeling and built in functions for the rapid application of statistical tests and generation of common plots and tables with publish-ready quality.

r-fritools 4.5.0
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://gitlab.com/fvafrcu/fritools
Licenses: FreeBSD
Synopsis: Utilities for the Forest Research Institute of the State Baden-Wuerttemberg
Description:

Miscellaneous utilities, tools and helper functions for finding and searching files on disk, searching for and removing R objects from the workspace. Does not import or depend on any third party package, but on core R only (i.e. it may depend on packages with priority base').

r-heumilkr 0.3.0
Propagated dependencies: r-xml2@1.3.8 r-rlang@1.1.6 r-ggplot2@3.5.2 r-cpp11@0.5.2 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/lschneiderbauer/heumilkr
Licenses: GPL 3+
Synopsis: Heuristic Capacitated Vehicle Routing Problem Solver
Description:

This package implements the Clarke-Wright algorithm to find a quasi-optimal solution to the Capacitated Vehicle Routing Problem. See Clarke, G. and Wright, J.R. (1964) <doi:10.1287/opre.12.4.568> for details. The implementation is accompanied by helper functions to inspect its solution.

r-ironseed 0.1.0
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://github.com/reedacartwright/ironseed
Licenses: Expat
Synopsis: Improved Random Number Generator Seeding
Description:

This package provides a procedure for seeding R's built in random number generators using a variable-length sequence of values. Accumulates input entropy into a 256-bit hash digest or "ironseed" and is able to generate a variable-length sequence of output seeds from an ironseed.

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