Create hexagonal shape sticker image. polaroid can be used in user's web browser. polaroid can be used in shinyapps.io'. In both way, user can download created hexSticker
as PNG image. polaroid is built based on argonDash
', colourpicker and hexSticker
R package.
This package provides functions for reading and writing Gadget N-body snapshots. The Gadget code is popular in astronomy for running N-body / hydrodynamical cosmological and merger simulations. To find out more about Gadget see the main distribution page at www.mpa-garching.mpg.de/gadget/.
This package provides functions for analysis of network objects, which are imported or simulated by the package. The non-parametric methods of analysis center on snowball and bootstrap sampling for estimating functions of network degree distribution. For other parameters of interest, see, e.g., bootnet package.
This package provides access to packages developed for downloading, reading and analyzing microdata from household surveys in Integrated System of Household Surveys - SIPD conducted by Brazilian Institute of Geography and Statistics - IBGE. More information can be obtained from the official website <https://www.ibge.gov.br/>.
This package implements the SoftBart
model of described by Linero and Yang (2018) <doi:10.1111/rssb.12293>, with the optional use of a sparsity-inducing prior to allow for variable selection. For usability, the package maintains the same style as the BayesTree
package.
Type hints are special comments within a function body indicating the intended nature of the function's arguments in terms of data types, dimensions and permitted values. The actual parameters with which the function is called are evaluated against these type hint comments at run-time.
Interactive visualization for Bayesian prior and posterior distributions. This package facilitates an animated transition between prior and posterior distributions. Additionally, it splits the distribution into bars based on the provided breaks, displaying the probability for each region. If no breaks are provided, it defaults to zero.
Ritornello is a ChIP-seq peak calling algorithm based on signal processing that can accurately call binding events without the need to do a pair total DNA input or IgG control sample. It has been tested for use with narrow binding events such as transcription factor ChIP-seq.
This package performs projection predictive feature selection for generalized linear models and generalized linear and additive multilevel models. The package is compatible with the rstanarm
and brms
packages, but other reference models can also be used. See the package vignette for more information and examples.
This package provides an estimation and inference methods for models of conditional quantiles: linear and nonlinear parametric and non-parametric models for conditional quantiles of a univariate response and several methods for handling censored survival data. Portfolio selection methods based on expected shortfall risk are also included.
This package constructs basis functions of B-splines, M-splines, I-splines, convex splines (C-splines), periodic splines, natural cubic splines, generalized Bernstein polynomials, their derivatives, and integrals (except C-splines) by closed-form recursive formulas. It also contains a C++ head-only library integrated with Rcpp.
Comprehensive and flexible logging library written in Ruby for use in Ruby programs. It features a hierarchical logging system of any number of levels, custom level names, logger inheritance, multiple output destinations per log event, execution tracing, custom formatting, thread safteyness, XML and YAML configuration, and more.
This package provides functions for (1) computing diagnostic test statistics (sensitivity, specificity, etc.) from confusion matrices with adjustment for various base rates or known prevalence based on McCaffrey
et al (2003) <doi:10.1007/978-1-4615-0079-7_1>, (2) computing optimal cut-off scores with different criteria including maximizing sensitivity, maximizing specificity, and maximizing the Youden Index from Youden (1950) <doi:10.1002/1097-0142(1950)3:1%3C32::AID-CNCR2820030106%3E3.0.CO;2-3>, and (3) displaying and comparing classification statistics and area under the receiver operating characteristic (ROC) curves or area under the curves (AUC) across consecutive categories for ordinal variables.
This package provides functions to efficiently query ArcGIS
REST APIs <https://developers.arcgis.com/rest/>. Both spatial and SQL queries can be used to retrieve data. Simple Feature (sf) objects are utilized to perform spatial queries. This package was neither produced nor is maintained by Esri.
This package provides a collection of efficient functions for working with individual ages and corresponding intervals. These include functions for conversion from an age to an interval, aggregation of ages with associated counts in to intervals and the splitting of interval counts based on specified age distributions.
This package provides a customisable set of tools for assessing and grading R or R-markdown scripts from students. It allows for checking correctness of code output, runtime statistics and static code analysis. The latter feature is made possible by representing R expressions using a tree structure.
BRIC-seq is a genome-wide approach for determining RNA stability in mammalian cells. This package provides a series of functions for performing quality check of your BRIC-seq data, calculation of RNA half-life for each transcript and comparison of RNA half-lives between two conditions.
An interactive application for working with contingency Tables. The application has a template for solving contingency table problems like chisquare test of independence,association plot between two categorical variables. Runtime examples are provided in the package function as well as at <https://jarvisatharva.shinyapps.io/CategoricalDataAnalysis/>
.
This package creates a common framework for organizing, naming, and gathering population, age, race, and ethnicity data from the Census Bureau. Accesses the API <https://www.census.gov/data/developers/data-sets.html>. Provides tools for adding information to existing data to line up with Census data.
Easy visualization for datasets with more than two categorical variables and additional continuous variables. diceplot is particularly useful for exploring complex categorical data in the context of pathway analysis across multiple conditions. For a detailed documentation please visit <https://dice-and-domino-plot.readthedocs.io/en/latest/>.
Analysis of experimental results and automatic report generation in both interactive HTML and LaTeX
. This package ships with a rich interface for data modeling and built in functions for the rapid application of statistical tests and generation of common plots and tables with publish-ready quality.
Miscellaneous utilities, tools and helper functions for finding and searching files on disk, searching for and removing R objects from the workspace. Does not import or depend on any third party package, but on core R only (i.e. it may depend on packages with priority base').
This package implements the Clarke-Wright algorithm to find a quasi-optimal solution to the Capacitated Vehicle Routing Problem. See Clarke, G. and Wright, J.R. (1964) <doi:10.1287/opre.12.4.568> for details. The implementation is accompanied by helper functions to inspect its solution.
This package provides a procedure for seeding R's built in random number generators using a variable-length sequence of values. Accumulates input entropy into a 256-bit hash digest or "ironseed" and is able to generate a variable-length sequence of output seeds from an ironseed.