This package contains functions to estimate a penalized regression model using 3CoSE
algorithm, see Weber, Striaukas, Schumacher Binder (2018) <doi:10.2139/ssrn.3211163>.
Reads raw files from Li-COR gas analyzers and produces a dataframe that can directly be used with fluxible <https://cran.r-project.org/package=fluxible>.
To create maps from tiles, maptiles downloads, composes and displays tiles from a large number of providers (e.g. OpenStreetMap
', Stadia', Esri', CARTO', or Thunderforest').
Conveniently log everything you type into the R console. Logs are are stored as tidy data frames which can then be analyzed using tidyverse style tools.
This is the core package for the many packages universe. It includes functions to help researchers work with and contribute to event datasets on global governance.
The identity provider ['OneLogin']<http://onelogin.com>
is used for authentication via Single Sign On (SSO). This package provides an R interface to their API.
Functionality to handle and project lat-long coordinates, easily download background maps and add a correct scale bar to OpenStreetMap
plots in any map projection.
Plotting toolbox for 2D oceanographic data (satellite data, sea surface temperature, chlorophyll, ocean fronts & bathymetry). Recognized classes and formats include netcdf, Raster, .nc and .gz files.
Global univariate minimization of Lipschitz functions is performed by using Pijavski method, which was published in Pijavski (1972) <DOI:10.1016/0041-5553(72)90115-2>.
This package provides a very bare-bones interface to use the Metropolis-Hastings Monte Carlo Markov Chain algorithm. It is suitable for teaching and testing purposes.
This package provides model specifications, tuning parameters for models in dann package. Models based on Hastie (1996) <https://web.stanford.edu/~hastie/Papers/dann_IEEE.pdf>.
Taxonomic information from Wikipedia', Wikicommons', Wikispecies', and Wikidata'. Functions included for getting taxonomic information from each of the sources just listed, as well performing taxonomic search.
The matchBox
package enables comparing ranked vectors of features, merging multiple datasets, removing redundant features, using CAT-plots and Venn diagrams, and computing statistical significance.
This is a simple data package including various data sets derived from the estrogen data for use with the puma (Propagating Uncertainty in Microarray Analysis) package.
Ularcirc reads in STAR aligned splice junction files and provides visualisation and analysis tools for splicing analysis. Users can assess backsplice junctions and forward canonical junctions.
This package contains gene-level counts for a collection of public scRNA-seq
datasets, provided as SingleCellExperiment
objects with cell- and gene-level metadata.
This package provides tools for statistical analysis of assembled transcriptomes, including flexible differential expression analysis, visualization of transcript structures, and matching of assembled transcripts to annotation.
This package expands the usethis
package with the goal of helping automate the process of creating R packages for Bioconductor or making them Bioconductor-friendly.
The purpose of this package is to simplify the storage and interrogation of quantitative trait loci (QTL) archives, such as eQTL, mQTL, dsQTL, and more.
This package provides mosaic plots for the ggplot2 framework. Mosaic plot functionality is provided in a single ggplot2 layer by calling the geom
mosaic
.
Ridgeline plots provide a convenient way of visualizing changes in distributions over time or space. This package enables the creation of such plots in ggplot2
.
This package provides a suite of elliptic and related functions including Weierstrass and Jacobi forms. It also includes various tools for manipulating and visualizing complex functions.
This package provides a universal hash over GF(2^128) useful for constructing a Message Authentication Code (MAC), as in the AES-GCM authenticated encryption cipher.
Orion is a cryptography library written in pure Rust. It aims to provide easy and usable crypto while trying to minimize the use of unsafe code.