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r-lassonet 0.8.3
Propagated dependencies: r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=LassoNet
Licenses: GPL 2+
Synopsis: 3CoSE Algorithm
Description:

This package contains functions to estimate a penalized regression model using 3CoSE algorithm, see Weber, Striaukas, Schumacher Binder (2018) <doi:10.2139/ssrn.3211163>.

r-licoread 0.2.0
Propagated dependencies: r-yaml@2.3.10 r-tidyr@1.3.1 r-tibble@3.2.1 r-stringr@1.5.1 r-rlang@1.1.6 r-readr@2.1.5 r-purrr@1.0.4 r-lubridate@1.9.4 r-jsonlite@2.0.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://jogaudard.github.io/licoread/
Licenses: GPL 3+
Synopsis: Reads Raw Files from Li-COR Gas Analyzers
Description:

Reads raw files from Li-COR gas analyzers and produces a dataframe that can directly be used with fluxible <https://cran.r-project.org/package=fluxible>.

r-maptiles 0.10.0
Propagated dependencies: r-terra@1.8-50 r-slippymath@0.3.1 r-sf@1.0-21 r-png@0.1-8 r-digest@0.6.37 r-curl@6.2.2
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/riatelab/maptiles/
Licenses: GPL 3
Synopsis: Download and Display Map Tiles
Description:

To create maps from tiles, maptiles downloads, composes and displays tiles from a large number of providers (e.g. OpenStreetMap', Stadia', Esri', CARTO', or Thunderforest').

r-matahari 0.1.3
Propagated dependencies: r-tibble@3.2.1 r-rstudioapi@0.17.1 r-rlang@1.1.6 r-readr@2.1.5 r-purrr@1.0.4 r-jsonlite@2.0.0 r-clipr@0.8.0
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/jhudsl/matahari
Licenses: Expat
Synopsis: Spy on Your R Session
Description:

Conveniently log everything you type into the R console. Logs are are stored as tidy data frames which can then be analyzed using tidyverse style tools.

r-manydata 1.0.2
Propagated dependencies: r-tidyr@1.3.1 r-stringr@1.5.1 r-remotes@2.5.0 r-purrr@1.0.4 r-messydates@0.5.4 r-jsonlite@2.0.0 r-httr@1.4.7 r-ggplot2@3.5.2 r-dtplyr@1.3.1 r-dplyr@1.1.4 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://manydata.ch/
Licenses: FSDG-compatible
Synopsis: Portal for Global Governance Data
Description:

This is the core package for the many packages universe. It includes functions to help researchers work with and contribute to event datasets on global governance.

r-onelogin 0.2.0
Propagated dependencies: r-tibble@3.2.1 r-safer@0.2.1 r-r6@2.6.1 r-magrittr@2.0.3 r-jsonlite@2.0.0 r-glue@1.8.0
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://cran.r-project.org/package=onelogin
Licenses: Expat
Synopsis: Interact with the 'OneLogin' API
Description:

The identity provider ['OneLogin']<http://onelogin.com> is used for authentication via Single Sign On (SSO). This package provides an R interface to their API.

r-osmscale 0.5.20
Propagated dependencies: r-sf@1.0-21 r-pbapply@1.7-2 r-openstreetmap@0.4.0 r-berryfunctions@1.22.5
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://github.com/brry/OSMscale
Licenses: GPL 2+
Synopsis: Add a Scale Bar to 'OpenStreetMap' Plots
Description:

Functionality to handle and project lat-long coordinates, easily download background maps and add a correct scale bar to OpenStreetMap plots in any map projection.

r-oceanmap 0.1.6
Dependencies: imagemagick@6.9.13-5
Propagated dependencies: r-sp@2.2-0 r-sf@1.0-21 r-reshape2@1.4.4 r-raster@3.6-32 r-plotrix@3.8-4 r-plotly@4.10.4 r-ncdf4@1.24 r-maps@3.4.2.1 r-mapdata@2.3.1 r-lubridate@1.9.4 r-ggplot2@3.5.2 r-ggedit@0.4.1 r-fields@16.3.1 r-extrafont@0.19 r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://cran.r-project.org/package=oceanmap
Licenses: GPL 3+
Synopsis: Plotting Toolbox for 2D Oceanographic Data
Description:

Plotting toolbox for 2D oceanographic data (satellite data, sea surface temperature, chlorophyll, ocean fronts & bathymetry). Recognized classes and formats include netcdf, Raster, .nc and .gz files.

r-pijavski 1.0.3
Propagated dependencies: r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=Pijavski
Licenses: LGPL 3
Synopsis: Global Univariate Minimization
Description:

Global univariate minimization of Lipschitz functions is performed by using Pijavski method, which was published in Pijavski (1972) <DOI:10.1016/0041-5553(72)90115-2>.

r-simplemh 0.1.1
Propagated dependencies: r-mvtnorm@1.3-3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/Bisaloo/simpleMH
Licenses: GPL 3
Synopsis: Simple Metropolis-Hastings MCMC Algorithm
Description:

This package provides a very bare-bones interface to use the Metropolis-Hastings Monte Carlo Markov Chain algorithm. It is suitable for teaching and testing purposes.

r-tidydann 1.0.1
Propagated dependencies: r-tibble@3.2.1 r-parsnip@1.3.1 r-generics@0.1.4 r-dials@1.4.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/gmcmacran/tidydann
Licenses: Expat
Synopsis: Add the 'dann' Model and the 'sub_dann' Model to the Tidymodels Ecosystem
Description:

This package provides model specifications, tuning parameters for models in dann package. Models based on Hastie (1996) <https://web.stanford.edu/~hastie/Papers/dann_IEEE.pdf>.

r-wikitaxa 0.4.0
Propagated dependencies: r-xml2@1.3.8 r-wikidatar@2.3.3 r-tibble@3.2.1 r-jsonlite@2.0.0 r-data-table@1.17.2 r-curl@6.2.2 r-crul@1.5.0
Channel: guix-cran
Location: guix-cran/packages/w.scm (guix-cran packages w)
Home page: https://docs.ropensci.org/wikitaxa
Licenses: Expat
Synopsis: Taxonomic Information from 'Wikipedia'
Description:

Taxonomic information from Wikipedia', Wikicommons', Wikispecies', and Wikidata'. Functions included for getting taxonomic information from each of the sources just listed, as well performing taxonomic search.

r-matchbox 1.50.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://bioconductor.org/packages/matchBox
Licenses: Artistic License 2.0
Synopsis: Utilities to compute, compare, and plot the agreement between ordered vectors of features (ie. distinct genomic experiments). The package includes Correspondence-At-the-TOP (CAT) analysis
Description:

The matchBox package enables comparing ranked vectors of features, merging multiple datasets, removing redundant features, using CAT-plots and Venn diagrams, and computing statistical significance.

r-pumadata 2.44.0
Propagated dependencies: r-puma@3.50.0 r-oligo@1.72.0 r-biobase@2.68.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: http://umber.sbs.man.ac.uk/resources/puma
Licenses: LGPL 2.0+
Synopsis: Various data sets for use with the puma package
Description:

This is a simple data package including various data sets derived from the estrogen data for use with the puma (Propagating Uncertainty in Microarray Analysis) package.

r-ularcirc 1.26.0
Propagated dependencies: r-yaml@2.3.10 r-shinyjs@2.1.0 r-shinyfiles@0.9.3 r-shinydashboard@0.7.3 r-shiny@1.10.0 r-s4vectors@0.46.0 r-r-utils@2.13.0 r-plotgardener@1.14.0 r-organism-dplyr@1.36.0 r-moments@0.14.1 r-mirbase-db@1.2.1 r-gsubfn@0.7 r-ggrepel@0.9.6 r-ggplot2@3.5.2 r-genomicranges@1.60.0 r-genomicfeatures@1.60.0 r-genomicalignments@1.44.0 r-genomeinfodbdata@1.2.14 r-genomeinfodb@1.44.0 r-dt@0.33 r-data-table@1.17.2 r-bsgenome@1.76.0 r-biostrings@2.76.0 r-biocgenerics@0.54.0 r-annotationhub@3.16.0 r-annotationdbi@1.70.0
Channel: guix-bioc
Location: guix-bioc/packages/u.scm (guix-bioc packages u)
Home page: https://bioconductor.org/packages/Ularcirc
Licenses: FSDG-compatible
Synopsis: Shiny app for canonical and back splicing analysis (i.e. circular and mRNA analysis)
Description:

Ularcirc reads in STAR aligned splice junction files and provides visualisation and analysis tools for splicing analysis. Users can assess backsplice junctions and forward canonical junctions.

r-scrnaseq 2.22.0
Propagated dependencies: r-alabaster-base@1.8.0 r-alabaster-matrix@1.8.0 r-alabaster-sce@1.8.0 r-annotationdbi@1.70.0 r-annotationhub@3.16.0 r-biocgenerics@0.54.0 r-dbi@1.2.3 r-delayedarray@0.34.1 r-ensembldb@2.32.0 r-experimenthub@2.16.0 r-genomicfeatures@1.60.0 r-genomicranges@1.60.0 r-gypsum@1.4.0 r-jsonlite@2.0.0 r-matrix@1.7-3 r-rsqlite@2.3.11 r-s4vectors@0.46.0 r-singlecellexperiment@1.30.1 r-sparsearray@1.8.0 r-summarizedexperiment@1.38.1
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/scRNAseq
Licenses: CC0
Synopsis: Collection of public single-cell RNA-seq datasets
Description:

This package contains gene-level counts for a collection of public scRNA-seq datasets, provided as SingleCellExperiment objects with cell- and gene-level metadata.

r-ballgown 2.40.0
Propagated dependencies: r-biobase@2.68.0 r-genomeinfodb@1.44.0 r-genomicranges@1.60.0 r-iranges@2.42.0 r-limma@3.64.0 r-rcolorbrewer@1.1-3 r-rtracklayer@1.68.0 r-s4vectors@0.46.0 r-sva@3.56.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/ballgown
Licenses: Artistic License 2.0
Synopsis: Flexible, isoform-level differential expression analysis
Description:

This package provides tools for statistical analysis of assembled transcriptomes, including flexible differential expression analysis, visualization of transcript structures, and matching of assembled transcripts to annotation.

r-biocthis 1.18.0
Propagated dependencies: r-biocmanager@1.30.25 r-fs@1.6.6 r-glue@1.8.0 r-rlang@1.1.6 r-styler@1.10.3 r-usethis@3.1.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://github.com/lcolladotor/biocthis
Licenses: Artistic License 2.0
Synopsis: Automate package and project setup for Bioconductor packages
Description:

This package expands the usethis package with the goal of helping automate the process of creating R packages for Bioconductor or making them Bioconductor-friendly.

r-gqtlbase 1.21.1
Propagated dependencies: r-batchjobs@1.9 r-bbmisc@1.13 r-biocgenerics@0.54.0 r-bit@4.6.0 r-doparallel@1.0.17 r-ff@4.5.2 r-ffbase@0.13.3 r-foreach@1.5.2 r-genomicfiles@1.44.1 r-genomicranges@1.60.0 r-rtracklayer@1.68.0 r-s4vectors@0.46.0 r-summarizedexperiment@1.38.1
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/gQTLBase
Licenses: Artistic License 2.0
Synopsis: Infrastructure for eQTL, mQTL and similar studies
Description:

The purpose of this package is to simplify the storage and interrogation of quantitative trait loci (QTL) archives, such as eQTL, mQTL, dsQTL, and more.

r-ggmosaic 0.3.3
Propagated dependencies: r-dplyr@1.1.4 r-ggplot2@3.5.2 r-ggrepel@0.9.6 r-plotly@4.10.4 r-productplots@0.1.1 r-purrr@1.0.4 r-rlang@1.1.6 r-scales@1.4.0 r-tidyr@1.3.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/haleyjeppson/ggmosaic
Licenses: GPL 2+
Synopsis: Mosaic plots in the ggplot2 framework
Description:

This package provides mosaic plots for the ggplot2 framework. Mosaic plot functionality is provided in a single ggplot2 layer by calling the geom mosaic.

r-ggridges 0.5.6
Propagated dependencies: r-ggplot2@3.5.2 r-scales@1.4.0 r-withr@3.0.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/clauswilke/ggridges
Licenses: GPL 2
Synopsis: Ridgeline plots in ggplot2
Description:

Ridgeline plots provide a convenient way of visualizing changes in distributions over time or space. This package enables the creation of such plots in ggplot2.

r-elliptic 1.4-0
Dependencies: pari-gp@2.17.2
Propagated dependencies: r-mass@7.3-65
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/RobinHankin/elliptic
Licenses: GPL 2
Synopsis: Weierstrass and Jacobi elliptic functions
Description:

This package provides a suite of elliptic and related functions including Weierstrass and Jacobi forms. It also includes various tools for manipulating and visualizing complex functions.

rust-ghash 0.5.1
Channel: guix
Location: gnu/packages/crates-crypto.scm (gnu packages crates-crypto)
Home page: https://github.com/RustCrypto/universal-hashes
Licenses: Expat ASL 2.0
Synopsis: Universal hash over GF(2^128)
Description:

This package provides a universal hash over GF(2^128) useful for constructing a Message Authentication Code (MAC), as in the AES-GCM authenticated encryption cipher.

rust-orion 0.17.7
Channel: guix
Location: gnu/packages/crates-crypto.scm (gnu packages crates-crypto)
Home page: https://github.com/orion-rs/orion
Licenses: Expat
Synopsis: Pure-Rust crypto
Description:

Orion is a cryptography library written in pure Rust. It aims to provide easy and usable crypto while trying to minimize the use of unsafe code.

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