Generate and translate standard Universally Unique Identifiers (UUIDs) into shorter - or just different - formats and back. Also implements base58 encoders and decoders.

This package provides a teal_data class as a unified data model for teal applications focusing on reproducibility and relational data.

Create publication quality plots and tables for Item Response Theory and Classical Test theory based item analysis, exploratory and confirmatory factor analysis.

Easily plot heat maps of the world, based on continuous or categorical data. Country labels can also be added to the map.

This package provides an RNA-seq workflow for differential transcript usage (DTU) following Salmon quantification. This workflow performs a DTU analysis on simulated data. It also shows how to use stageR to perform two-stage testing of DTU, a statistical framework to screen at the gene level and then confirm which transcripts within the significant genes show evidence of DTU.

Rasterize images using a 3D software renderer. 3D scenes are created either by importing external files, building scenes out of the included objects, or by constructing meshes manually. Supports point and directional lights, anti-aliased lines, shadow mapping, transparent objects, translucent objects, multiple materials types, reflection, refraction, environment maps, multicore rendering, bloom, tone-mapping, and screen-space ambient occlusion.

Interface to JDemetra+ 3.x (<https://github.com/jdemetra>) time series analysis software. It provides a variety of methods for temporal disaggregation & interpolation, benchmarking, reconciliation and calendarization. It incorporates statistical methods described in the latest European Statistical System (ESS) guidelines on temporal disaggregation, benchmarking, and reconciliation (2018 edition). The package implements highly efficient algorithms for fast and reliable computation.

Measure single-storage water supply system performance using resilience, reliability, and vulnerability metrics; assess storage-yield-reliability relationships; determine no-fail storage with sequent peak analysis; optimize release decisions for water supply, hydropower, and multi-objective reservoirs using deterministic and stochastic dynamic programming; generate inflow replicates using parametric and non-parametric models; evaluate inflow persistence using the Hurst coefficient.

This package provides a programmatic interface to FishBase', re-written based on an accompanying RESTful API. Access tables describing over 30,000 species of fish, their biology, ecology, morphology, and more. This package also supports experimental access to SeaLifeBase data, which contains nearly 200,000 species records for all types of aquatic life not covered by FishBase.'.

Reads river network shape files and computes network distances. Also included are a variety of computation and graphical tools designed for fisheries telemetry research, such as minimum home range, kernel density estimation, and clustering analysis using empirical k-functions with a bootstrap envelope. Tools are also provided for editing the river networks, meaning there is no reliance on external software.

The biobtreeR package provides an interface to biobtree, a tool which covers large sets of bioinformatics datasets and allows search and chain mappings functionalities.

This package provides functionality to create pretty word clouds, visualize differences and similarity between documents, and avoid over-plotting in scatter plots with text.

This package provides methods to create, store, access, and manipulate large matrices. Matrices are allocated to shared memory and may use memory-mapped files.

This light-weight package helps you track and visualize the progress of parallel versions of vectorized R functions of the mc*apply family.

This package provides an R Shiny application to create visual abstracts for original research. A variety of user defined options and formatting are included.

This package provides tools for functional enrichment analysis, gene identifier conversion and mapping homologous genes across related organisms via the g:Profiler toolkit.

This package provides a system for generating extendable and customizable heatmaps for exploring complex datasets, including big data and data with multiple data types.

This is a package for constructing minimum-cost regular spanning subgraph as part of a non-parametric two-sample test for equality of distribution.

This package provides a consistent, flexible and easy to use tool to parse and convert strings into cases like snake or camel among others.

An implementation of Relax NG schema validation written in Common Lisp, including support for compact syntax, DTD Compatibility, and the XSD type library.

This package provides is a small collection of algorithms that can be reused when throttling user interactions with a resource (e.g., an API).

This package provides a simple block-driven assertion library for both testing and for production code that attempts to make test definitions more readable.

Package designed to visualize genomic data along the chromosomes, where the vertical chromosomes are sorted by number, with sex chromosomes at the end.

Detect several types of aberrant behavior, including answer copying, answer similarity, change point, nonparametric misfit, parametric misfit, preknowledge, rapid guessing, and test tampering.