We extend dplyr and fuzzyjoin join functions with features to preprocess the data, apply various data checks, and deal with conflicting columns.

Upload raster data and easily create interactive quantitative risk analysis QRA visualizations. Select from numerous color palettes, base-maps, and different configurations.

Create publication quality plots and tables for Item Response Theory and Classical Test theory based item analysis, exploratory and confirmatory factor analysis.

This package provides a teal_data class as a unified data model for teal applications focusing on reproducibility and relational data.

Easily plot heat maps of the world, based on continuous or categorical data. Country labels can also be added to the map.

The package pRolocGUI comprises functions to interactively visualise spatial proteomics data on the basis of pRoloc, pRolocdata and shiny.

The package offer different classifiers based on comparisons of pair of features (TSP), using various decision rules (e.g., majority wins principle).

This package provides an array-like container for convenient access and manipulation of HDF5 datasets. It supports delayed operations and block processing.

This package provides functions to estimate a bipartite graph of protein complex membership using AP-MS data.

This package provides methods and functionality to analyze flow data that is beyond the basic infrastructure provided by the flowCore package.

This package provides dataset samples (Affymetrix: Expression, Gene, Exon, SNP; NimbleGen: Expression, Tiling) to be used with the oligo package.

This package provides tools to create a measure of inter-point dissimilarity useful for clustering mixed data, and, optionally, perform the clustering.

This package provides routines for the polynomial spline fitting routines hazard regression, hazard estimation with flexible tails, logspline, lspec, polyclass, and polymars.

This package provides a Ruby wrapper for the OAuth 2.0 protocol built with a similar style to the original OAuth spec.

Rendering Extension defines a protocol for a digital image composition as the foundation of a new rendering model within the X Window System.

The Echo nest <http://the.echonest.com> is the industry's leading music intelligence company, providing developer with deepest understanding of music content and music fans. This package can be used to access artist's data including songs, blogs, news, reviews etc. Song's data including audio summary, style, danceability, tempo etc can also be accessed.

Generation of univariate and multivariate data that follow the generalized Poisson distribution. The details of the univariate part are explained in Demirtas (2017) <doi: 10.1080/03610918.2014.968725>, and the multivariate part is an extension of the correlated Poisson data generation routine that was introduced in Yahav and Shmueli (2012) <doi: 10.1002/asmb.901>.

An implementation to compute an optimal adaptive allocation rule using deep reinforcement learning in a dose-response study (Matsuura et al. (2022) <doi:10.1002/sim.9247>). The adaptive allocation rule can directly optimize a performance metric, such as power, accuracy of the estimated target dose, or mean absolute error over the estimated dose-response curve.

Interoperability between Rcpp and the C++11 array and tuple types. Linking to this package allows fixed-length std::array objects to be converted to and from equivalent R vectors, and std::tuple objects converted to lists, via the as() and wrap() functions. There is also experimental support for std::span from C++20'.

This package provides typed parameter documentation tags for integration with roxygen2'. Typed parameter tags provide a consistent interface for annotating expected types for parameters and returned values. Tools for converting from existing styles are also provided to easily adapt projects which implement typed documentation by convention rather than tag. Use the default format or provide your own.

The ability to plot raster graphics in PDF files can be useful when one needs multi-page documents, but the plots contain so many individual elements that (the usual) use of vector graphics results in inconveniently large file sizes. Internally, the package plots each individual page as a PNG, and then combines them in one PDF file.

Interface around JDemetra+ (<https://github.com/jdemetra/jdemetra-app>), the seasonal adjustment software officially recommended to the members of the European Statistical System (ESS) and the European System of Central Banks. It offers full access to all options and outputs of JDemetra+', including the two leading seasonal adjustment methods TRAMO/SEATS+ and X-12ARIMA/X-13ARIMA-SEATS.

This package infers and discriminates RIP peaks from RIP-seq alignments using two-state HMM with negative binomial emission probability. While RIPSeeker is specifically tailored for RIP-seq data analysis, it also provides a suite of bioinformatics tools integrated within this self-contained software package comprehensively addressing issues ranging from post-alignments processing to visualization and annotation.

This package provides a developing software suite for multiple change-point and change-point-type feature detection/estimation (data segmentation) in data sequences.