This package provides functions for the computationally efficient simulation of dynamic networks estimated with the statistical framework of temporal exponential random graph models, implemented in the tergm package.

This package provides a Shiny application for the interactive visualisation and analysis of networks that also provides a web interface for collecting social media data using vosonSML'.

This package provides a WebSocket client interface for R. WebSocket is a protocol for low-overhead real-time communication: <https://en.wikipedia.org/wiki/WebSocket>.

This package provides fast algorithms for the Theil-Sen estimator, Siegel's repeated median slope estimator, and Passing-Bablok regression. The implementation is based on algorithms by Dillencourt et al. (1992) <doi:10.1142/S0218195992000020> and Matousek et al. (1998) <doi:10.1007/PL00009190>. The implementations are detailed in Raymaekers (2023) <doi:10.32614/RJ-2023-012> and Raymaekers J., Dufey F. (2022) <arXiv:2202.08060>. All algorithms run in quasilinear time.

Process phylogenetic trees with tropical support vector machine and principal component analysis defined with tropical geometry. Details about tropical support vector machine are available in : Tang, X., Wang, H. & Yoshida, R. (2020) <arXiv:2003.00677>. Details about tropical principle component analysis are available in : Page, R., Yoshida, R. & Zhang L. (2020) <doi:10.1093/bioinformatics/btaa564> and Yoshida, R., Zhang, L. & Zhang, X. (2019) <doi:10.1007/s11538-018-0493-4>.

Infer log-linear Poisson Graphical Model with an auxiliary data set. Hot-deck multiple imputation method is used to improve the reliability of the inference with an auxiliary dataset. Standard log-linear Poisson graphical model can also be used for the inference and the Stability Approach for Regularization Selection (StARS) is implemented to drive the selection of the regularization parameter. The method is fully described in <doi:10.1093/bioinformatics/btx819>.

Implemented fast and memory-efficient Notch-filter, Welch-periodogram, discrete wavelet spectrogram for minutes of high-resolution signals, fast 3D convolution, image registration, 3D mesh manipulation; providing fundamental toolbox for intracranial Electroencephalography (iEEG) pipelines. Documentation and examples about RAVE project are provided at <https://rave.wiki>, and the paper by John F. Magnotti, Zhengjia Wang, Michael S. Beauchamp (2020) <doi:10.1016/j.neuroimage.2020.117341>; see citation("ravetools") for details.

This package provides a tool designed to analyze recurrent events when dealing with right-censored data and the potential presence of a terminal event (that prevents further occurrences, like death). It extends the random survival forest algorithm, adapting splitting rules and node estimators to handle complexities of recurrent events. The methodology is fully described in Murris, J., Bouaziz, O., Jakubczak, M., Katsahian, S., & Lavenu, A. (2024) (<https://hal.science/hal-04612431v1/document>).

The goal of sansSouci is to perform post hoc inference: in a multiple testing context, sansSouci provides statistical guarantees on possibly user-defined and/or data-driven sets of hypotheses.

This package is a set of R functions for generating precise figures. This tool helps you to create clean markdown reports about what you just discovered with your analysis script.

This package provides tidy tools for quantifying how well a model fits to a data set such as confusion matrices, class probability curve summaries, and regression metrics (e.g., RMSE).

This package preloads class unions for defining/loading core OOMPA tools. It also includes vectorized operations for row-by-row means, variances, and t-tests. Finally, it provides new colorschemes.

This package converts between R and Simple Feature sf objects, without depending on the Simple Feature library. Conversion functions are available at both the R level, and through Rcpp.

This package provides functions to make useful (and pretty) plots for scientific plotting. Additional plotting features are added for base plotting, with particular emphasis on making attractive log axis plots.

Red Eclipse is an arena shooter, created from the Cube2 engine. Offering an innovative parkour system and distinct but all potent weapons, Red Eclipse provides fast paced and accessible gameplay.

Minima is a one-size-fits-all Jekyll theme for writers. It's Jekyll's default (and first) theme. It's what you get when you run jekyll new.

This package provides functions to calculate the assortment of vertices in social networks. This can be measured on both weighted and binary networks, with discrete or continuous vertex values.

This package provides a collection of tools for antitrust practitioners, including the ability to calibrate different consumer demand systems and simulate the effects of mergers under different competitive regimes.

Fits Bayesian grouped weighted quantile sum (BGWQS) regressions for one or more chemical groups with binary outcomes. Wheeler DC et al. (2019) <doi:10.1016/j.sste.2019.100286>.

Making probabilistic projections of life expectancy for all countries of the world, using a Bayesian hierarchical model <doi:10.1007/s13524-012-0193-x>. Subnational projections are also supported.

Call the DeOldify <https://github.com/jantic/DeOldify> image colorization API on DeepAI'<https://deepai.org/machine-learning-model/colorizer> to colorize black and white images.

Visualize the connectedness of factors in two-way tables. Perform two-way filtering to improve the degree of connectedness. See Weeks & Williams (1964) <doi:10.1080/00401706.1964.10490188>.

Generation of different Christmas cards, most of them being animated. Most of the cards can be generated in three languages (English, Catalan and Spanish). The collection started in 2009.

This package provides a collection of easy-to-use functions for creating visualizations of compositional data using ggplot2'. Includes support for common plotting techniques in compositional data analysis.