This package adds 3D perspective plotting of points, paths, and line, 3D perspective axes, 3D perspective annotations, and wireframe plots.

This package lets you perform unsupervised clustering of amplicon sequencing data in microbiome studies with the Dirichlet-tree Multinomial Mixtures.

This package provides functions for feed-forward neural networks with a single hidden layer, and for multinomial log-linear models.

The ade4 package contains data analysis functions to analyze ecological and environmental data in the framework of Euclidean exploratory methods.

This is a QTL mapping toolkit for inbred crosses and recombinant inbred lines. It includes maximum likelihood and Bayesian tools.

This package provides a more comfortable interface to work with R data or source files in a key-value fashion.

This package provides useful tools to pry back the covers of R and understand the language at a deeper level.

This is a framework for construction and analysis of 2D Monte-Carlo simulations. In addition, this package includes various distributions.

Issues RPC-JSON calls to bitcoind', the daemon of Bitcoin Cash (BCH), to extract transaction data from the blockchain. BCH is a fork of Bitcoin that permits a greater number of transactions per second. A BCH daemon is available under an MIT license from the Bitcoin Unlimited website <https://www.bitcoinunlimited.info>.

This package provides a collection of functions for numerical construction of optimal discriminating designs. At the current moment T-optimal designs (which maximize the lower bound for the power of F-test for regression model discrimination), KL-optimal designs (for lognormal errors) and their robust analogues can be calculated with the package.

Assists for presentation and visualization of data from the Norwegian Health Quality Registries following the standardization based on the requirement specified by the National Service for Health Quality Registries. This requirement can be accessed from (<https://www.kvalitetsregistre.no/resultater-til-publisering-pa-nett>). Unfortunately the website is only available in Norwegian.

Toolkit for identification and statistical testing of RNA editing signals from within R. Provides support for identifying sites from bulk-RNA and single cell RNA-seq datasets, and general methods for extraction of allelic read counts from alignment files. Facilitates annotation and exploratory analysis of editing signals using Bioconductor packages and resources.

This is a package for operations on triangular meshes based on VCGLIB. This package integrates nicely with the R-package rgl to render the meshes processed by Rvcg. The Visualization and Computer Graphics Library (VCG for short) is a library for manipulation, processing and displaying with OpenGL of triangle and tetrahedral meshes.

Spatial Dispersion Index (SDI) is a generalized measurement index, or rather a family of indices to evaluate spatial dispersion of movements/flows in a network in a problem neutral way as described in: Gencer (2023) <doi:10.1007/s12061-023-09545-8>. This package computes and optionally visualizes this index with minimal hassle.

This package provides a data manager meant to avoid manual storage/retrieval of data to/from the file system. It builds one (or more) centralized repository where R objects are stored with rich annotations, including corresponding code chunks, and easily searched and retrieved. See Napolitano (2017) <doi:10.1037/a0028240> for further information.

Set of functions to analyse and estimate Artificial Counterfactual models from Carvalho, Masini and Medeiros (2016) <DOI:10.2139/ssrn.2823687>.

Preferred methods for common analytical tasks that are undertaken across the Department, including number formatting, project templates and curated reference data.

Loads behavioural data from the widely used Drosophila Activity Monitor System (DAMS, TriKinetics <https://trikinetics.com/>) into the rethomics framework.

Perform tree-ring analyses such as detrending, chronology building, and cross dating. Read and write standard file formats used in dendrochronology.

Impute general multivariate missing data with the fractional hot deck imputation based on Jaekwang Kim (2011) <doi:10.1093/biomet/asq073>.

This package implements categorical principal component analysis ('PRINCALS'), multiple correspondence analysis ('HOMALS'), monotone regression analysis ('MORALS'). It replaces the homals package.

This package provides functions for the management and treatment of hydrology and meteorology time-series stored in a Sqlite data base.

Exploratory data analysis and manipulation functions for multi- label data sets along with an interactive Shiny application to ease their use.

Computes the Nelson-Aalen estimator of the cumulative transition hazard for arbitrary Markov multistate models <ISBN:978-0-387-68560-1>.