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r-kaos 0.1.2
Propagated dependencies: r-reshape2@1.4.5 r-ggplot2@4.0.3
Channel: guix-cran
Location: guix-cran/packages/k.scm (guix-cran packages k)
Home page: https://cran.r-project.org/package=kaos
Licenses: GPL 2+
Build system: r
Synopsis: Encoding of Sequences Based on Frequency Matrix Chaos Game Representation
Description:

Sequences encoding by using the chaos game representation. Löchel et al. (2019) <doi:10.1093/bioinformatics/btz493>.

r-pcse 1.9.1.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pcse
Licenses: GPL 3+
Build system: r
Synopsis: Panel-Corrected Standard Error Estimation in R
Description:

This package provides a function to estimate panel-corrected standard errors. Data may contain balanced or unbalanced panels.

r-sads 0.6.5
Propagated dependencies: r-vgam@1.1-14 r-powerlaw@1.0.0 r-poilog@0.4.2.1 r-mass@7.3-65 r-guilds@1.4.7 r-bbmle@1.0.25.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/piLaboratory/sads
Licenses: GPL 2
Build system: r
Synopsis: Maximum Likelihood Models for Species Abundance Distributions
Description:

Maximum likelihood tools to fit and compare models of species abundance distributions and of species rank-abundance distributions.

r-rvcg 0.25
Propagated dependencies: r-rcpp@1.1.1-1.1 r-rcpparmadillo@15.2.7-1 r-rcppeigen@0.3.4.0.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/zarquon42b/Rvcg
Licenses: GPL 2+
Build system: r
Synopsis: Manipulations of triangular meshes based on the VCGLIB API
Description:

This is a package for operations on triangular meshes based on VCGLIB. This package integrates nicely with the R-package rgl to render the meshes processed by Rvcg. The Visualization and Computer Graphics Library (VCG for short) is a library for manipulation, processing and displaying with OpenGL of triangle and tetrahedral meshes.

r-rssa 1.1
Dependencies: fftw@3.3.10
Propagated dependencies: r-svd@0.5.8 r-lattice@0.22-9 r-forecast@9.0.2
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/asl/rssa
Licenses: GPL 2+
Build system: r
Synopsis: Collection of Methods for Singular Spectrum Analysis
Description:

This package provides methods and tools for Singular Spectrum Analysis including decomposition, forecasting and gap-filling for univariate and multivariate time series. General description of the methods with many examples can be found in the book Golyandina (2018, <doi:10.1007/978-3-662-57380-8>). See citation("Rssa") for details.

r-rtms 0.2.0
Propagated dependencies: r-ggplot2@4.0.3
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rtms
Licenses: GPL 3+
Build system: r
Synopsis: R Toolkit for Mass Spectrometry
Description:

Quickly imports, processes, analyzes, and visualizes mass-spectrometric data. Includes functions for easily extracting specific data and measurements from large (multi-gigabyte) raw Bruker data files, as well as a set of S3 object classes for manipulating and measuring mass spectrometric peaks and plotting peaks and spectra using the ggplot2 package.

r-rdav 0.3.0
Propagated dependencies: r-xml2@1.5.2 r-httr2@1.2.2
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/gk-crop/rdav
Licenses: GPL 2
Build system: r
Synopsis: Simple 'WebDAV' Client
Description:

This package provides a simple WebDAV client that provides functions to fetch and send files or folders to servers using the WebDAV protocol (see RFC 4918 <https://www.rfc-editor.org/rfc/rfc4918>). Only a subset of the protocol is implemented (e.g. file locks are not yet supported).

r-raer 1.10.0
Propagated dependencies: r-summarizedexperiment@1.42.0 r-singlecellexperiment@1.34.0 r-seqinfo@1.2.0 r-s4vectors@0.50.1 r-rtracklayer@1.72.0 r-rsamtools@2.28.0 r-rhtslib@3.8.0 r-matrix@1.7-5 r-iranges@2.46.0 r-genomicranges@1.64.0 r-genomicfeatures@1.64.0 r-genomicalignments@1.48.0 r-genomeinfodb@1.48.0 r-cli@3.6.6 r-bsgenome@1.80.0 r-biostrings@2.80.1 r-biocparallel@1.46.0 r-biocgenerics@0.58.1
Channel: guix-bioc
Location: guix-bioc/packages/r.scm (guix-bioc packages r)
Home page: https://rnabioco.github.io/raer
Licenses: Expat
Build system: r
Synopsis: RNA editing tools in R
Description:

Toolkit for identification and statistical testing of RNA editing signals from within R. Provides support for identifying sites from bulk-RNA and single cell RNA-seq datasets, and general methods for extraction of allelic read counts from alignment files. Facilitates annotation and exploratory analysis of editing signals using Bioconductor packages and resources.

r-rodd 0.2-1
Propagated dependencies: r-rootsolve@1.8.2.4 r-quadprog@1.5-8 r-numderiv@2016.8-1.1 r-matrixcalc@1.0-6 r-matrix@1.7-5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rodd
Licenses: GPL 2+
Build system: r
Synopsis: Optimal Discriminating Designs
Description:

This package provides a collection of functions for numerical construction of optimal discriminating designs. At the current moment T-optimal designs (which maximize the lower bound for the power of F-test for regression model discrimination), KL-optimal designs (for lognormal errors) and their robust analogues can be calculated with the package.

r-rbch 0.1-2
Propagated dependencies: r-rjson@0.2.23 r-openssl@2.4.2 r-httr@1.4.8 r-gmp@0.7-5.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/Rucknium/rbch
Licenses: GPL 3
Build system: r
Synopsis: Extraction and Analysis of Data from the Bitcoin Cash (BCH) Blockchain
Description:

Issues RPC-JSON calls to bitcoind', the daemon of Bitcoin Cash (BCH), to extract transaction data from the blockchain. BCH is a fork of Bitcoin that permits a greater number of transactions per second. A BCH daemon is available under an MIT license from the Bitcoin Unlimited website <https://www.bitcoinunlimited.info>.

r-gg3d 0.0.0.9000-1.ffdd837
Propagated dependencies: r-dplyr@1.2.1 r-ggplot2@4.0.3 r-magrittr@2.0.5 r-plot3d@1.4.2 r-plyr@1.8.9 r-scales@1.4.0
Channel: guix
Location: gnu/packages/bioinformatics.scm (gnu packages bioinformatics)
Home page: https://github.com/AckerDWM/gg3D
Licenses: GPL 3+
Build system: r
Synopsis: 3D perspective plots for ggplot2
Description:

This package adds 3D perspective plotting of points, paths, and line, 3D perspective axes, 3D perspective annotations, and wireframe plots.

r-dtmm 0.1.0-1.3a553b1
Propagated dependencies: r-ape@5.8-1 r-rcpp@1.1.1-1.1 r-rcpparmadillo@15.2.7-1
Channel: guix
Location: gnu/packages/bioinformatics.scm (gnu packages bioinformatics)
Home page: https://github.com/MaStatLab/DTMM
Licenses: CC0
Build system: r
Synopsis: Dirichlet-tree multinomial mixtures
Description:

This package lets you perform unsupervised clustering of amplicon sequencing data in microbiome studies with the Dirichlet-tree Multinomial Mixtures.

r-bqtl 1.0-39
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: http://famprevmed.ucsd.edu/faculty/cberry/bqtl/
Licenses: GPL 2+
Build system: r
Synopsis: Bayesian QTL mapping toolkit
Description:

This is a QTL mapping toolkit for inbred crosses and recombinant inbred lines. It includes maximum likelihood and Bayesian tools.

r-nnet 7.3-20
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://www.stats.ox.ac.uk/pub/MASS4/
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Feed-forward neural networks and multinomial log-linear models
Description:

This package provides functions for feed-forward neural networks with a single hidden layer, and for multinomial log-linear models.

r-mc2d 0.2.2
Propagated dependencies: r-ggplot2@4.0.3 r-ggpubr@0.6.3 r-mvtnorm@1.4-1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=mc2d
Licenses: GPL 2+
Build system: r
Synopsis: Tools for two-dimensional monte-carlo simulations
Description:

This is a framework for construction and analysis of 2D Monte-Carlo simulations. In addition, this package includes various distributions.

r-ade4 1.7-24
Propagated dependencies: r-mass@7.3-65 r-pixmap@0.4-14 r-rcpp@1.1.1-1.1 r-rcpparmadillo@15.2.7-1 r-sp@2.2-1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://pbil.univ-lyon1.fr/ADE-4
Licenses: GPL 2+
Build system: r
Synopsis: Multivariate data analysis and graphical display
Description:

The ade4 package contains data analysis functions to analyze ecological and environmental data in the framework of Euclidean exploratory methods.

r-fail 1.3
Propagated dependencies: r-bbmisc@1.13.1 r-checkmate@2.3.4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/mllg/fail
Licenses: Modified BSD
Build system: r
Synopsis: File abstraction interface layer (FAIL)
Description:

This package provides a more comfortable interface to work with R data or source files in a key-value fashion.

r-dune 1.24.0
Propagated dependencies: r-tidyr@1.3.2 r-summarizedexperiment@1.42.0 r-rcolorbrewer@1.1-3 r-purrr@1.2.2 r-magrittr@2.0.5 r-ggplot2@4.0.3 r-gganimate@1.0.11 r-dplyr@1.2.1 r-biocparallel@1.46.0 r-aricode@1.1.0
Channel: guix-bioc
Location: guix-bioc/packages/d.scm (guix-bioc packages d)
Home page: https://bioconductor.org/packages/Dune
Licenses: Expat
Build system: r
Synopsis: Improving replicability in single-cell RNA-Seq cell type discovery
Description:

Given a set of clustering labels, Dune merges pairs of clusters to increase mean ARI between labels, improving replicability.

r-cisp 0.2.0
Propagated dependencies: r-tidyr@1.3.2 r-tibble@3.3.1 r-sf@1.1-1 r-sdsfun@0.8.1 r-purrr@1.2.2 r-magrittr@2.0.5 r-igraph@2.3.2 r-ggraph@2.2.2 r-ggplot2@4.0.3 r-gdverse@1.6 r-forcats@1.0.1 r-dplyr@1.2.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://stscl.github.io/cisp/
Licenses: GPL 3
Build system: r
Synopsis: Correlation Indicator Based on Spatial Patterns
Description:

Utilizes spatial association marginal contributions derived from spatial stratified heterogeneity to capture the degree of correlation between spatial patterns.

r-cccm 0.1.0
Propagated dependencies: r-rlang@1.2.0 r-dplyr@1.2.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=cccm
Licenses: GPL 3
Build system: r
Synopsis: Crossed Classification Credibility Model
Description:

Calculates the credit debt for the next period based on the available data using the cross-classification credibility model.

r-cswr 0.1.3
Propagated dependencies: r-rlang@1.2.0 r-ggplot2@4.0.3 r-bench@1.1.4
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://jolars.github.io/CSwR-Package/
Licenses: Expat
Build system: r
Synopsis: Companion to the Book "Computational Statistics with R"
Description:

This package provides data sets and functions used in the book "Computational Statistics with R" (<https://cswr.nrhstat.org>).

r-funr 0.3.2
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://github.com/sahilseth/funr
Licenses: Expat
Build system: r
Synopsis: Simple Utility Providing Terminal Access to all R Functions
Description:

This package provides a small utility which wraps Rscript and provides access to all R functions from the shell.

r-gnlm 1.1.2
Propagated dependencies: r-rmutil@1.1.10
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://www.commanster.eu/rcode.html
Licenses: GPL 2+
Build system: r
Synopsis: Generalized Nonlinear Regression Models
Description:

This package provides a variety of functions to fit linear and nonlinear regression with a large selection of distributions.

r-igrf 2.0
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://github.com/bluegreen-labs/igrf
Licenses: AGPL 3
Build system: r
Synopsis: International Geomagnetic Reference Field
Description:

The 14th generation International Geomagnetic Reference Field (IGRF). A standard spherical harmonic representation of the Earth's main field.

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