_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/
r-survawkmt2 1.0.1
Propagated dependencies: r-survival@3.8-3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=survAWKMT2
Licenses: GPL 2
Synopsis: Two-Sample Tests Based on Differences of Kaplan-Meier Curves
Description:

Tests for equality of two survival functions based on integrated weighted differences of two Kaplan-Meier curves.

r-testfordep 0.2.0
Propagated dependencies: r-rcpp@1.0.14 r-minerva@1.5.10 r-hmisc@5.2-3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=testforDEP
Licenses: GPL 3
Synopsis: Dependence Tests for Two Variables
Description:

This package provides test statistics, p-value, and confidence intervals based on 9 hypothesis tests for dependence.

r-tiktokadsr 0.1.0
Propagated dependencies: r-jsonlite@2.0.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://windsor.ai/
Licenses: GPL 3
Synopsis: Access to TikTok Ads via the 'Windsor.ai' API
Description:

Collect marketing data from TikTok Ads using the Windsor.ai API <https://windsor.ai/api-fields/>.

r-gwasurvivr 1.26.0
Propagated dependencies: r-variantannotation@1.54.1 r-survival@3.8-3 r-summarizedexperiment@1.38.1 r-snprelate@1.42.0 r-matrixstats@1.5.0 r-gwastools@1.54.0
Channel: guix-bioc
Location: guix-bioc/packages/g.scm (guix-bioc packages g)
Home page: https://github.com/suchestoncampbelllab/gwasurvivr
Licenses: Artistic License 2.0
Synopsis: gwasurvivr: an R package for genome wide survival analysis
Description:

gwasurvivr is a package to perform survival analysis using Cox proportional hazard models on imputed genetic data.

r-jaspar2018 1.1.1
Channel: guix-bioc
Location: guix-bioc/packages/j.scm (guix-bioc packages j)
Home page: http://jaspar.genereg.net/
Licenses: GPL 2
Synopsis: Data package for JASPAR 2018
Description:

Data package for JASPAR 2018. To search this databases, please use the package TFBSTools (>= 1.15.6).

r-mirbase-db 1.2.1
Propagated dependencies: r-annotationdbi@1.70.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://bioconductor.org/packages/mirbase.db
Licenses: FSDG-compatible
Synopsis: miRBase: the microRNA database
Description:

miRBase: the microRNA database assembled using data from miRBase (http://www.mirbase.org/).

r-nondetects 2.38.1
Propagated dependencies: r-mvtnorm@1.3-3 r-limma@3.64.1 r-htqpcr@1.62.0 r-biobase@2.68.0 r-arm@1.14-4
Channel: guix-bioc
Location: guix-bioc/packages/n.scm (guix-bioc packages n)
Home page: https://bioconductor.org/packages/nondetects
Licenses: GPL 3
Synopsis: Non-detects in qPCR data
Description:

This package provides methods to model and impute non-detects in the results of qPCR experiments.

r-omiccircos 1.46.0
Propagated dependencies: r-genomicranges@1.60.0
Channel: guix-bioc
Location: guix-bioc/packages/o.scm (guix-bioc packages o)
Home page: https://bioconductor.org/packages/OmicCircos
Licenses: GPL 2
Synopsis: High-quality circular visualization of omics data
Description:

OmicCircos is an R application and package for generating high-quality circular plots for omics data.

r-qckitfastq 1.24.0
Dependencies: zlib@1.3
Propagated dependencies: r-zlibbioc@1.54.0 r-seqtools@1.42.0 r-rseqan@1.28.0 r-rlang@1.1.6 r-reshape2@1.4.4 r-rcpp@1.0.14 r-magrittr@2.0.3 r-ggplot2@3.5.2 r-dplyr@1.1.4 r-data-table@1.17.4
Channel: guix-bioc
Location: guix-bioc/packages/q.scm (guix-bioc packages q)
Home page: https://bioconductor.org/packages/qckitfastq
Licenses: Artistic License 2.0
Synopsis: FASTQ Quality Control
Description:

Assessment of FASTQ file format with multiple metrics including quality score, sequence content, overrepresented sequence and Kmers.

r-hgu133a-db 3.13.0
Propagated dependencies: r-annotationdbi@1.70.0 r-org-hs-eg-db@3.21.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/hgu133a.db
Licenses: Artistic License 2.0
Synopsis: Affymetrix HG-U133A Array annotation data (chip hgu133a)
Description:

This package provides Affymetrix HG-U133A Array annotation data (chip hgu133a) assembled using data from public repositories.

r-jaspar2020 0.99.10
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://jaspar.elixir.no/
Licenses: GPL 2
Synopsis: Data package for JASPAR database (version 2020)
Description:

Data package for JASPAR2020. To explore these databases, utilize the TFBSTools package (version 1.23.1 or higher).

r-dicedesign 1.10
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: http://dice.emse.fr/
Licenses: GPL 3
Synopsis: Designs of computer experiments
Description:

This package provides tools to create some specific Space-Filling Design (SFD) and to test their quality.

r-stringfish 0.16.0
Dependencies: pcre2@10.42
Propagated dependencies: r-rcpp@1.0.14 r-rcppparallel@5.1.10
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/traversc/stringfish
Licenses: GPL 3
Synopsis: Alternative string implementation
Description:

This package provides an extendable, performant and multithreaded alt-string implementation backed by C++ vectors and strings.

cl-safe-read 0.1-0.d25f085
Propagated dependencies: cl-local-time@1.0.6-4.40169fe cl-trivial-garbage@0.21-0.3474f64
Channel: guix
Location: gnu/packages/lisp-xyz.scm (gnu packages lisp-xyz)
Home page: https://github.com/phoe/safe-read/
Licenses: FreeBSD
Synopsis: Safer variant of READ
Description:

This package provides a safer variant of READ secure against internbombing, excessive input and macro characters.

ruby_version 1.0.2
Channel: guix
Location: gnu/packages/ruby-xyz.scm (gnu packages ruby-xyz)
Home page: https://github.com/janlelis/ruby_version
Licenses: Expat
Synopsis: Ruby library to help check the Ruby version
Description:

ruby_version provides a RubyVersion module to simplify checking for the right Ruby version in software.

r-repairdata 0.1.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/petzi53/repairData
Licenses: Expat
Synopsis: Open Repair Alliance Datasets 2021
Description:

The complete data set of open repair data, full compliant with the Open Repair Data Standards (ORDS). It combines the datasets contributed by partner organizations of the Open Repair Alliance (ORA). Last updated: 2021-02-22. The package also contains via quests enriched datasets on batteries, printer, mobiles, and tablets.

r-regionalst 1.6.0
Propagated dependencies: r-toast@1.22.0 r-tibble@3.2.1 r-summarizedexperiment@1.38.1 r-singlecellexperiment@1.30.1 r-shiny@1.10.0 r-seurat@5.3.0 r-scater@1.36.0 r-s4vectors@0.46.0 r-rcolorbrewer@1.1-3 r-magrittr@2.0.3 r-gridextra@2.3 r-ggplot2@3.5.2 r-fgsea@1.34.0 r-dplyr@1.1.4 r-colorspace@2.1-1 r-biocstyle@2.36.0 r-bayesspace@1.17.0 r-assertthat@0.2.1
Channel: guix-bioc
Location: guix-bioc/packages/r.scm (guix-bioc packages r)
Home page: https://bioconductor.org/packages/RegionalST
Licenses: GPL 3
Synopsis: Investigating regions of interest and performing regional cell type-specific analysis with spatial transcriptomics data
Description:

This package analyze spatial transcriptomics data through cross-regional cell type-specific analysis. It selects regions of interest (ROIs) and identifys cross-regional cell type-specific differential signals. The ROIs can be selected using automatic algorithm or through manual selection. It facilitates manual selection of ROIs using a shiny application.

r-amerifluxr 1.0.0
Propagated dependencies: r-readxl@1.4.5 r-rcurl@1.98-1.17 r-memoise@2.0.1 r-jsonlite@2.0.0 r-httr@1.4.7 r-heatmaply@1.5.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/chuhousen/amerifluxr
Licenses: Modified BSD
Synopsis: Interface to 'AmeriFlux' Data Services
Description:

Programmatic interface to the AmeriFlux database (<https://ameriflux.lbl.gov/>). Provide query, download, and data summary tools.

r-akmbiclust 0.1.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=akmbiclust
Licenses: GPL 3
Synopsis: Alternating K-Means Biclustering
Description:

This package implements the alternating k-means biclustering algorithm in Fraiman and Li (2020) <arXiv:2009.04550>.

r-extremefit 1.1.0
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=extremefit
Licenses: GPL 2
Synopsis: Estimation of Extreme Conditional Quantiles and Probabilities
Description:

Extreme value theory, nonparametric kernel estimation, tail conditional probabilities, extreme conditional quantile, adaptive estimation, quantile regression, survival probabilities.

r-factoshiny 2.7
Propagated dependencies: r-shinyjqui@0.4.1 r-shinydashboard@0.7.3 r-shiny@1.10.0 r-missmda@1.20 r-ggrepel@0.9.6 r-ggplot2@3.5.2 r-factominer@2.11 r-factoinvestigate@1.9 r-dt@0.33 r-colourpicker@1.3.0
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: http://factominer.free.fr/graphs/factoshiny.html
Licenses: GPL 2+
Synopsis: Perform Factorial Analysis from 'FactoMineR' with a Shiny Application
Description:

Perform factorial analysis with a menu and draw graphs interactively thanks to FactoMineR and a Shiny application.

r-gmdatabase 0.5.1
Propagated dependencies: r-shiny@1.10.0 r-rmysql@0.11.1 r-foreach@1.5.2 r-digest@0.6.37 r-dbi@1.2.3
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://cran.r-project.org/package=gmDatabase
Licenses: GPL 2+ LGPL 2.0+
Synopsis: Accessing a Geometallurgical Database with R
Description:

This package provides a template for a geometallurgical database and a fast and easy interface for accessing it.

r-gghoriplot 1.0.1
Propagated dependencies: r-tidyr@1.3.1 r-stringr@1.5.1 r-magrittr@2.0.3 r-glue@1.8.0 r-ggplot2@3.5.2 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://rivasiker.github.io/ggHoriPlot/
Licenses: GPL 3
Synopsis: Horizon Plots for 'ggplot2'
Description:

This package provides a user-friendly, highly customizable R package for building horizon plots in the ggplot2 environment.

r-interpretr 0.2.5
Propagated dependencies: r-randomforest@4.7-1.2 r-auc@0.3.2
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=interpretR
Licenses: GPL 2+
Synopsis: Binary Classifier and Regression Model Interpretation Functions
Description:

Compute permutation- based performance measures and create partial dependence plots for (cross-validated) randomForest and ada models.

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