Implementation of spatially-explicit, stochastic disease models with customizable time windows that describe how parameter values fluctuate during outbreaks (e.g., in response to public health or conservation interventions).

Add shiny inputs with one or more inline buttons that grow and shrink with inputs. Also add tool tips to input buttons and styling and messages for input validation.

This package provides a connector to the What3Words (http://what3words.com/) service, which represents each 3m by 3m square on earth with a unique trio of English-language words.

The XKCD color survey asked participants to name colours. Randall Munroe published the top thousand(roughly) names and their sRGB hex values. This package lets you use them.

Single cell multiome data, containing chromatin accessibility (scATAC-seq) and gene expression (scRNA-seq) information analyzed with the ArchR package and presented as MultiAssayExperiment objects.

This package provides a set of functions to generate high-resolution Venn,Vennpie plot,extract and combine details of these subsets with user datasets in data frame is available.

This is a tool for human B-cell context-specific transcriptional regulatory network. In addition, this package provides a human normal B-cells dataset for the examples in package viper.

This package implements methods to project single-cell RNA-seq data onto a reference atlas, enabling interpretation of unknown cell transcriptomic states in the the context of known, reference states.

This package provides a collection of all the estimation functions for spatial cross-sectional models (on lattice/areal data using spatial weights matrices) contained up to now in spdep.

This library provides methods to encode and decode Ascii85 binary-to-text encoding. The main modern use of Ascii85 is in PostScript and Portable Document Format (PDF) file formats.

Markaby allows writing HTML packages in pure Ruby. This is similar to the functionality provided by ERB, but without the mixture of HTML and additional ERB syntax.

Duplicated restaurant data (pre-processed and formatted) for entity resolution. This package contains formatted data from a data set that contains information about different restaurants, with the Zagats portion containing 331 records and the Fodors portion containing 533 records. The following variables are included in the data set: id, name, address, city, phone, type. The data set has a respective gold data set that provides information on which records match based on id.

This package provides a collection of functions related to the study of etiologic heterogeneity both across disease subtypes and across individual disease markers. The included functions allow one to quantify the extent of etiologic heterogeneity in the context of a case-control study, and provide p-values to test for etiologic heterogeneity across individual risk factors. Begg CB, Zabor EC, Bernstein JL, Bernstein L, Press MF, Seshan VE (2013) <doi:10.1002/sim.5902>.

Set chunk hooks for R Markdown documents <https://rmarkdown.rstudio.com/>, and improve user experience. For example, change units of figure sizes, benchmark chunks, and number lines on code blocks.

Could be used to obtain spatial depths, spatial ranks and outliers of multivariate random variables. Could also be used to visualize DD-plots (a multivariate generalization of QQ-plots).

This package provides functions for converting objects to scalars (vectors of length 1) and a more inclusive definition of data that can be interpreted as numbers (numeric and complex alike).

Adds flow maps to ggplot2 plots. The flow maps consist of ggplot2 layers which visualize the nodes as circles and the bilateral flows between the nodes as bidirectional half-arrows.

Bindings to libfluidsynth to parse and synthesize MIDI files. It can read MIDI into a data frame, play it on the local audio device, or convert into an audio file.

Create an interactive function map by analyzing a specified R script. It uses the find_dependencies() function from the functiondepends package to recursively trace all user-defined function dependencies.

Download and process public domain works in the Project Gutenberg collection <https://www.gutenberg.org/>. Includes metadata for all Project Gutenberg works, so that they can be searched and retrieved.

Use GTFS (General Transit Feed Specification) data for routing from nominated start and end stations, for extracting isochrones', and travel times from any nominated start station to all other stations.

Makes it easy to extract and combine variables from the HILDA (Household, Income and Labour Dynamics in Australia) survey maintained by the Melbourne Institute <https://melbourneinstitute.unimelb.edu.au/hilda>.

R interface to access the web services of the ICES (International Council for the Exploration of the Sea) DATRAS trawl survey database <https://datras.ices.dk/WebServices/Webservices.aspx>.

Implementation of two p-value combination techniques (inverse normal and Fisher methods). A vignette is provided to explain how to perform a meta-analysis from two independent RNA-seq experiments.