r-easyrnaseq 2.48.0
Propagated dependencies: r-summarizedexperiment@1.42.0 r-shortread@1.70.0 r-seqinfo@1.2.0 r-s4vectors@0.50.1 r-rsamtools@2.28.0 r-rappdirs@0.3.4 r-lsd@4.1-0 r-iranges@2.46.0 r-genomicranges@1.64.0 r-genomicalignments@1.48.0 r-genomeintervals@1.68.0 r-edger@4.10.0 r-biostrings@2.80.1 r-biomart@2.68.0 r-biocparallel@1.46.0 r-biocgenerics@0.58.1 r-biocfilecache@3.2.0 r-biobase@2.72.0
Channel: guix-bioc
Home page: https://bioconductor.org/packages/easyRNASeq
Licenses: Artistic License 2.0
Build system: r
Synopsis: Count summarization and normalization for RNA-Seq data
Description:
Calculates the coverage of high-throughput short-reads against a genome of reference and summarizes it per feature of interest (e.g. exon, gene, transcript). The data can be normalized as RPKM or by the DESeq or edgeR package.
Total packages: 1