r-easyrnaseq 2.46.0
Propagated dependencies: r-summarizedexperiment@1.40.0 r-shortread@1.68.0 r-seqinfo@1.0.0 r-s4vectors@0.48.0 r-rsamtools@2.26.0 r-rappdirs@0.3.3 r-lsd@4.1-0 r-iranges@2.44.0 r-genomicranges@1.62.0 r-genomicalignments@1.46.0 r-genomeintervals@1.66.0 r-edger@4.8.0 r-biostrings@2.78.0 r-biomart@2.66.0 r-biocparallel@1.44.0 r-biocgenerics@0.56.0 r-biocfilecache@3.0.0 r-biobase@2.70.0
Channel: guix-bioc
Home page: https://bioconductor.org/packages/easyRNASeq
Licenses: Artistic License 2.0
Build system: r
Synopsis: Count summarization and normalization for RNA-Seq data
Description:
Calculates the coverage of high-throughput short-reads against a genome of reference and summarizes it per feature of interest (e.g. exon, gene, transcript). The data can be normalized as RPKM or by the DESeq or edgeR package.
Total results: 1