_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


python-nwbinspector 0.6.5
Propagated dependencies: python-aiohttp@3.11.11 python-click@8.1.8 python-fsspec@2025.9.0 python-hdmf-zarr@0.12.0 python-isodate@0.7.2 python-jsonschema@4.23.0 python-natsort@8.4.0 python-packaging@25.0 python-pynwb@3.1.3 python-pyyaml@6.0.2 python-requests@2.32.5 python-tqdm@4.67.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://nwbinspector.readthedocs.io/
Licenses: Modified BSD
Build system: pyproject
Synopsis: Inspect NWB files for compliance with NWB Best Practices
Description:

This inspector is meant as a companion to the PyNWB validator, which checks for strict schema compliance. This tool attempts to apply some common sense to find components of the file that are technically compliant, but possibly incorrect, suboptimal in their representation, or deviate from best practices.

python-mne 1.11.0
Dependencies: procps@4.0.3
Propagated dependencies: python-decorator@5.2.1 python-jinja2@3.1.2 python-lazy-loader@0.4 python-matplotlib@3.8.2 python-numpy@1.26.4 python-packaging@25.0 python-pooch@1.8.1 python-scipy@1.12.0 python-tqdm@4.67.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://mne.tools/stable/index.html
Licenses: Modified BSD
Build system: pyproject
Synopsis: MEG and EEG analysis and visualization
Description:

MNE-Python is an open-source Python package for exploring, visualizing, and analyzing human neurophysiological data such as MEG, EEG, sEEG, ECoG, and more. It includes modules for data input/output, preprocessing, visualization, source estimation, time-frequency analysis, connectivity analysis, machine learning, statistics, and more.

python-fooof 1.1.1
Propagated dependencies: python-matplotlib@3.8.2 python-numpy@1.26.4 python-pandas@2.2.3 python-scipy@1.12.0 python-tqdm@4.67.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/fooof-tools/fooof
Licenses: ASL 2.0
Build system: pyproject
Synopsis: Fitting oscillations & one over f (FOOOF)
Description:

Fast, efficient, and physiologically-informed tool to parameterize neural power spectra

python-lspopt 1.4.0
Propagated dependencies: python-numpy@1.26.4 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/hbldh/lspopt
Licenses: Expat
Build system: pyproject
Synopsis: Multitaper window method for estimating Wigner spectra for certain locally stationary processes
Description:

This package provides a Python implementation of a multitaper window method for estimating Wigner spectra for certain locally stationary processes.

python-eeglabio 0.1.2
Propagated dependencies: python-numpy@1.26.4 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/jackz314/eeglabio
Licenses: Modified BSD
Build system: pyproject
Synopsis: I/O support for EEGLAB files in Python
Description:

This package provides support for reading and writing EEGLAB files in Python.

liblsl 1.17.5
Dependencies: asio@1.36.0 boost@1.89.0 pugixml@1.12.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://labstreaminglayer.readthedocs.io/
Licenses: Expat
Build system: cmake
Synopsis: Lab Streaming Layer library
Description:

This package provides a C++ library for multi-modal time-synched data transmission over the local network.

python-neo 0.14.3
Propagated dependencies: python-dateutil@2.9.0 python-h5py@3.13.0 python-igor2@0.5.12 python-joblib@1.5.2 python-klusta@3.0.16-0.408e898 python-nixio@1.5.4 python-numpy@1.26.4 python-packaging@25.0 python-pillow@11.1.0 python-probeinterface@0.3.1 python-pyedflib@0.1.42 python-pynwb@3.1.3 python-quantities@0.16.4 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: http://neo.readthedocs.io
Licenses: Modified BSD
Build system: pyproject
Synopsis: Electrophysiology data in Python
Description:

Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats.

python-neurodsp 2.3.0
Propagated dependencies: python-matplotlib@3.8.2 python-numpy@1.26.4 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://neurodsp-tools.github.io/neurodsp
Licenses: ASL 2.0
Build system: pyproject
Synopsis: Digital signal processing for neural time series
Description:

Tools to analyze and simulate neural time series, using digital signal processing.

python-pyedflib 0.1.42
Propagated dependencies: python-numpy@1.26.4
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://pyedflib.readthedocs.io
Licenses: Modified BSD
Build system: pyproject
Synopsis: Library to read/write EDF+/BDF+ files
Description:

pyEDFlib is a Python library to read/write EDF+/BDF+ files based on EDFlib. EDF means European Data Format

python-klusta 3.0.16-0.408e898
Propagated dependencies: python-click@8.1.8 python-h5py@3.13.0 python-numpy@1.26.4 python-scipy@1.12.0 python-six@1.17.0 python-tqdm@4.67.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://klusta.cortexlab.net
Licenses: Modified BSD
Build system: pyproject
Synopsis: Spike detection and automatic clustering for spike sorting
Description:

klusta is an open source package for automatic spike sorting of multielectrode neurophysiological recordings made with probes containing up to a few dozens of sites.

python-edfio 0.4.10
Propagated dependencies: python-numpy@1.26.4
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://edfio.readthedocs.io
Licenses: ASL 2.0
Build system: pyproject
Synopsis: Read and write EDF/EDF+ files
Description:

edfio is a Python package for reading and writing EDF and EDF+C files.

meggie 1.10.0
Propagated dependencies: python-appdirs@1.4.4 python-colorama@0.4.6 python-h5io@0.2.5 python-json-logger@2.0.7 python-matplotlib@3.8.2 python-mne@1.11.0 python-mne-qt-browser@0.7.4 python-numpy@1.26.4 python-pandas@2.2.3 python-pyqt@5.15.11 python-scikit-learn@1.7.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://cibr-jyu.github.io/meggie
Licenses: Modified BSD
Build system: pyproject
Synopsis: User-friendly graphical user interface to do M/EEG analysis
Description:

Meggie is an open-source software designed for intuitive MEG and EEG analysis. With its user-friendly graphical interface, Meggie brings the powerful analysis methods of MNE-Python to researchers without requiring programming skills.

python-kilosort 4.1.3
Propagated dependencies: python-faiss@1.10.0 python-matplotlib@3.8.2 python-numba@0.61.0 python-numpy@1.26.4 python-psutil@7.0.0 python-pyqtgraph@0.13.7 python-pyside-6@6.9.2 python-pytorch@2.9.0 python-qtpy@2.4.3 python-scikit-learn@1.7.0 python-scipy@1.12.0 python-tqdm@4.67.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/MouseLand/kilosort
Licenses: Modified BSD
Build system: pyproject
Synopsis: spike sorting pipeline
Description:

spike sorting pipeline.

python-alphacsc 0.4.1
Propagated dependencies: python-joblib@1.5.2 python-matplotlib@3.8.2 python-mne@1.11.0 python-numba@0.61.0 python-numpy@1.26.4 python-scikit-learn@1.7.0 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://alphacsc.github.io/
Licenses: Modified BSD
Build system: pyproject
Synopsis: Convolutional dictionary learning for noisy signals
Description:

This is a library to perform shift-invariant sparse dictionary learning, also known as convolutional sparse coding (CSC), on time-series data.

fortran-fpm 0.12.0
Dependencies: gfortran@14.3.0
Channel: guix-science
Location: guix-science/packages/fortran.scm (guix-science packages fortran)
Home page: https://fpm.fortran-lang.org
Licenses: Expat
Build system: copy
Synopsis: Fortran Package Manager
Description:

Fortran Package Manager (fpm) is a package manager and build system for Fortran. Its key goal is to improve the user experience of Fortran programmers. It does so by making it easier to build your Fortran program or library, run the executables, tests, and examples, and distribute it as a dependency to other Fortran projects. Fpm's user interface is modeled after Rust's Cargo, so if you're familiar with that tool, you will feel at home with fpm. Fpm's long term vision is to nurture and grow the ecosystem of modern Fortran applications and libraries.

fypp 3.2
Channel: guix-science
Location: guix-science/packages/fortran.scm (guix-science packages fortran)
Home page: https://github.com/aradi/fypp
Licenses: FreeBSD
Build system: pyproject
Synopsis: Python powered Fortran preprocessor
Description:

Fypp is a Python powered preprocessor. It can be used for any programming languages but its primary aim is to offer a Fortran preprocessor, which helps to extend Fortran with condititional compiling and template metaprogramming capabilities. Instead of introducing its own expression syntax, it uses Python expressions in its preprocessor directives, offering the consistency and versatility of Python when formulating metaprogramming tasks.

device-xlib 0.8.6
Dependencies: openblas@0.3.30
Channel: guix-science
Location: guix-science/packages/fortran.scm (guix-science packages fortran)
Home page: https://gitlab.com/max-centre/components/devicexlib
Licenses: GPL 3+
Build system: gnu
Synopsis: Fortran library wrapping device-oriented routines and utilities
Description:

deviceXlib is a library that wraps device-oriented routines and utilities, such as device data allocation, host-device data transfers. It supports CUDA language, together with OpenACC and OpenMP programming paradigms. It wraps a subset of functions from Nvidia cuBLAS, Intel oneMKL BLAS and AMD rocBLAS libraries.

device-xlib 0.2.0-1.08558f7
Dependencies: openblas@0.3.30 lapack@3.12.1
Channel: guix-science
Location: guix-science/packages/fortran.scm (guix-science packages fortran)
Home page: https://gitlab.com/max-centre/components/devicexlib
Licenses: GPL 3+
Build system: gnu
Synopsis: Fortran library wrapping device-oriented routines and utilities
Description:

deviceXlib is a library that wraps device-oriented routines and utilities, such as device data allocation, host-device data transfers. It supports CUDA language, together with OpenACC and OpenMP programming paradigms. It wraps a subset of functions from Nvidia cuBLAS, Intel oneMKL BLAS and AMD rocBLAS libraries.

python-pygmt 0.18.0
Dependencies: ghostscript@9.56.1 gmt@6.6.0
Propagated dependencies: python-contextily@1.7.0 python-geopandas@1.1.1 python-ipython@8.37.0 python-numpy@1.26.4 python-packaging@25.0 python-pandas@2.2.3 python-pyarrow@22.0.0 python-rioxarray@0.21.0 python-xarray@2023.12.0
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: https://www.pygmt.org/
Licenses: Modified BSD
Build system: pyproject
Synopsis: Python interface for the Generic Mapping Tools
Description:

PyGMT is a library for processing geospatial and geophysical data and making publication-quality maps and figures. It provides a Pythonic interface for the Generic Mapping Tools (GMT), a command-line program widely used across the Earth, Ocean, and Planetary sciences and beyond.

python-pysolid 0.3.4
Propagated dependencies: python-matplotlib@3.8.2 python-numpy@1.26.4 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: https://github.com/insarlab/PySolid
Licenses: GPL 3+
Build system: pyproject
Synopsis: Compute solid Earth tides in Python
Description:

This package provides a Python wrapper for solid to compute solid Earth tides.

python-contextily 1.7.0
Propagated dependencies: python-geopy@2.4.1 python-joblib@1.5.2 python-matplotlib@3.8.2 python-mercantile@1.2.1 python-pillow@11.1.0 python-rasterio@1.3.7 python-requests@2.32.5 python-xyzservices@2025.4.0
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: https://contextily.readthedocs.io/
Licenses: Modified BSD
Build system: pyproject
Synopsis: Context geo-tiles in Python
Description:

This packge provides utilities to retrieve tile maps from the internet. It can add those tiles as basemap to matplotlib figures or write tile maps to disk into geospatial raster files. Bounding boxes can be passed in both WGS84 (EPSG:4326) and Spheric Mercator (EPSG:3857).

python-discretize 0.12.0
Propagated dependencies: python-numpy@1.26.4 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: https://discretize.simpeg.xyz/
Licenses: Expat
Build system: pyproject
Synopsis: Finite volume discretization in Python
Description:

This package provides discretization tools for finite volume and inverse problems.

The vision is to create a package for finite volume simulation with a focus on large scale inverse problems. This package has the following features:

  • modular with respect to the spacial discretization

  • built with the inverse problem in mind

  • supports 1D, 2D and 3D problems

  • access to sparse matrix operators

  • access to derivatives to mesh variables

Currently, discretize supports:

  • Tensor Meshes (1D, 2D and 3D)

  • Cylindrically Symmetric Meshes

  • QuadTree and OcTree Meshes (2D and 3D)

  • Logically Rectangular Meshes (2D and 3D)

  • Triangular (2D) and Tetrahedral (3D) Meshes

python-utm 0.8.1
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: https://github.com/Turbo87/utm
Licenses: Expat
Build system: pyproject
Synopsis: Bidirectional UTM-WGS84 converter for Python
Description:

This package provides conversion functions between UTM and WGS84 coordinates.

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Total results: 69112