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If you'd like to join our channel search send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.
Load Current Population Survey (CPS) microdata into R using the Census Bureau Data API (<https://www.census.gov/data/developers/data-sets.html>), including basic monthly CPS and CPS ASEC microdata.
This package provides the basic functionality to interact with the Collatz conjecture. The parameterisation uses the same (P,a,b) notation as Conway's generalisations. Besides the function and reverse function, there is also functionality to retrieve the hailstone sequence, the "stopping time"/"total stopping time", or tree-graph. The only restriction placed on parameters is that both P and a can't be 0. For further reading, see <https://en.wikipedia.org/wiki/Collatz_conjecture>.
Clusters longitudinal trajectories over time (can be unequally spaced, unequal length time series and/or partially overlapping series) on a common time axis. Performs k-means clustering on a single continuous variable measured over time, where each mean is defined by a thin plate spline fit to all points in a cluster. Distance is MSE across trajectory points to cluster spline. Provides graphs of derived cluster splines, silhouette plots, and Adjusted Rand Index evaluations of the number of clusters. Scales well to large data with multicore parallelism available to speed computation.
The COSSO regularization method automatically estimates and selects important function components by a soft-thresholding penalty in the context of smoothing spline ANOVA models. Implemented models include mean regression, quantile regression, logistic regression and the Cox regression models.
This package provides the official administrative boundaries of the Azores (Região Autónoma dos Açores (RAA)) as defined in the 2024 edition of the Carta Administrativa Oficial de Portugal (CAOP), published by the Direção-Geral do Território (DGT). The package includes convenience functions to import these boundaries as sf objects for spatial analysis in R. Source: <https://geo2.dgterritorio.gov.pt/caop/CAOP_RAA_2024-gpkg.zip>.
Clustering categorical sequences by means of finite mixtures with Markov model components is the main utility of ClickClust. The package also allows detecting blocks of equivalent states by forward and backward state selection procedures.
This package provides a suite of functions to parse Crystallographic Information Files (.cif), extracting essential data such as chemical formulas, unit cell parameters, atomic coordinates, and symmetry operations. It also includes tools to calculate interatomic distances, identify bonded pairs using various algorithms (minimum_distance, brunner_nn_reciprocal, econ_nn, crystal_nn), determine nearest neighbor counts, and calculate bond angles. The package is designed to facilitate the preparation of crystallographic data for further analysis, including machine learning applications in materials science. Methods are described in: Brunner (1977) <doi:10.1107/S0567739477000461>; Hoppe (1979) <doi:10.1524/zkri.1979.150.14.23>; O'Keeffe (1979) <doi:10.1107/S0567739479001765>; Shannon (1976) <doi:10.1107/S0567739476001551>; Pan et al. (2021) <doi:10.1021/acs.inorgchem.0c02996>; Pauling (1960, ISBN:978-0801403330).
Computes the uniform rate of profit, the vector of price of production and the vector of direct prices; and also compute measures of deviation between market prices, direct prices and prices of production. <doi:10.1016/j.strueco.2026.03.009>. You provide the input-output data and clptheory does the calculations for you.
This package performs the Cram method, a general and efficient approach to simultaneous learning and evaluation using a generic machine learning algorithm. In a single pass of batched data, the proposed method repeatedly trains a machine learning algorithm and tests its empirical performance. Because it utilizes the entire sample for both learning and evaluation, cramming is significantly more data-efficient than sample-splitting. Unlike cross-validation, Cram evaluates the final learned model directly, providing sharper inference aligned with real-world deployment. The method naturally applies to both policy learning and contextual bandits, where decisions are based on individual features to maximize outcomes. The package includes cram_policy() for learning and evaluating individualized binary treatment rules, cram_ml() to train and assess the population-level performance of machine learning models, and cram_bandit() for on-policy evaluation of contextual bandit algorithms. For all three functions, the package provides estimates of the average outcome that would result if the model were deployed, along with standard errors and confidence intervals for these estimates. Details of the method are described in Jia, Imai, and Li (2024) <https://www.hbs.edu/ris/Publication%20Files/2403.07031v1_a83462e0-145b-4675-99d5-9754aa65d786.pdf> and Jia et al. (2025) <doi:10.48550/arXiv.2403.07031>.
This project provides a group of new functions to calculate the outputs of the two main components of the Canadian Forest Fire Danger Rating System (CFFDRS) Van Wagner and Pickett (1985) <https://ostrnrcan-dostrncan.canada.ca/entities/publication/29706108-2891-4e5d-a59a-a77c96bc507c>) at various time scales: the Fire Weather Index (FWI) System Wan Wagner (1985) <https://ostrnrcan-dostrncan.canada.ca/entities/publication/d96e56aa-e836-4394-ba29-3afe91c3aa6c> and the Fire Behaviour Prediction (FBP) System Forestry Canada Fire Danger Group (1992) <https://cfs.nrcan.gc.ca/pubwarehouse/pdfs/10068.pdf>. Some functions have two versions, table and raster based.
Classifies the type of cancer using routinely collected data commonly found in cancer registries from pathology reports. The package implements the International Classification of Diseases for Oncology, 3rd Edition site (topography), histology (morphology), and behaviour codes of neoplasms to classify cancer type <https://www.who.int/standards/classifications/other-classifications/international-classification-of-diseases-for-oncology>. Classification in children utilize the International Classification of Childhood Cancer by Steliarova-Foucher et al. (2005) <doi:10.1002/cncr.20910>. Adolescent and young adult cancer classification is based on Barr et al. (2020) <doi:10.1002/cncr.33041>.
Detects all R installations on the current machine and migrates installed R packages between them. Provides find_routes() to discover R versions, manifest() to scan package libraries in a child R process, inventory() to compare two libraries, and ship() to install packages into a target R version using pak'. Includes a Shiny dashboard (open_hub()) for interactive source-to-target migration.
This package provides a curated list of copepod-fish ecological interaction records. It contains the taxonomy of the copepod and the fish and the publication from which the information was obtained. This database contains only marine and brackish water fish species. It excludes fish species that inhabit only freshwater.
Fast categorization of items based on external code data identified by regular expressions. A typical use case considers patient with medically coded data, such as codes from the International Classification of Diseases ('ICD') or the Anatomic Therapeutic Chemical ('ATC') classification system. Functions of the package relies on a triad of objects: (1) case data with unit id:s and possible dates of interest; (2) external code data for corresponding units in (1) and with optional dates of interest and; (3) a classification scheme ('classcodes object) with regular expressions to identify and categorize relevant codes from (2). It is easy to introduce new classification schemes ('classcodes objects) or to use default schemes included in the package. Use cases includes patient categorization based on comorbidity indices such as Charlson', Elixhauser', RxRisk V', or the comorbidity-polypharmacy score (CPS), as well as adverse events after hip and knee replacement surgery.
Population ratio estimator (calibrated) under two-phase random sampling design has gained enormous popularity in the recent time. This package provides functions for estimation population ratio (calibrated) under two phase sampling design, including the approximate variance of the ratio estimator. The improved ratio estimator can be applicable for both the case, when auxiliary data is available at unit level or aggregate level (eg., mean or total) for first phase sampled. Calibration weight of each unit of the second phase sample was calculated. Single and combined inclusion probabilities were also estimated for both phases under two phase random [simple random sampling without replacement (SRSWOR)] sampling. The improved ratio estimator's percentage coefficient of variation was also determined as a measure of accuracy. This package has been developed based on the theoretical development of Islam et al. (2021) and Ozgul (2020) <doi:10.1080/00949655.2020.1844702>.
We propose to determine the correction of the significance level after multiple coding of an explanatory variable in Generalized Linear Model. The different methods of correction of the p-value are the Single step Bonferroni procedure, and resampling based methods developed by P.H.Westfall in 1993. Resampling methods are based on the permutation and the parametric bootstrap procedure. If some continuous, and dichotomous transformations are performed this package offers an exact correction of the p-value developed by B.Liquet & D.Commenges in 2005. The naive method with no correction is also available.
This package provides a method for determining groups in multiple curves with an automatic selection of their number based on k-means or k-medians algorithms. The selection of the optimal number is provided by bootstrap methods or other approaches with lower computational cost. The methodology can be applied both in regression and survival framework. Implemented methods are: Grouping multiple survival curves described by Villanueva et al. (2018) <doi:10.1002/sim.8016>.
Color palettes for EPL, MLB, NBA, NHL, and NFL teams.
Estimation and inference methods for the continuous threshold expectile regression. It can fit the continuous threshold expectile regression and test the existence of change point, for the paper, "Feipeng Zhang and Qunhua Li (2016). A continuous threshold expectile regression, submitted.".
This package provides a lightweight data validation and testing toolkit for R. Its guiding philosophy is that adding code-based data checks to users existing workflow should be both quick and intuitive. The suite of functions included therefore mirror the common data checks many users already perform by hand or by eye. Additionally, the checkthat package is optimized to work within tidyverse data manipulation pipelines.
API Client for the Climate Hazards Center CHIRPS and CHIRTS'. The CHIRPS data is a quasi-global (50°S â 50°N) high-resolution (0.05 arc-degrees) rainfall data set, which incorporates satellite imagery and in-situ station data to create gridded rainfall time series for trend analysis and seasonal drought monitoring. CHIRTS is a quasi-global (60°S â 70°N), high-resolution data set of daily maximum and minimum temperatures. For more details on CHIRPS and CHIRTS data please visit its official home page <https://www.chc.ucsb.edu/data>.
An implementation of double generalized linear model (DGLM) building with variable selection procedures and handling of interaction terms and other complex situations. We also provide a method of handling convergence issues within the dglm() function. The package offers a simulation function for generating simulated data for testing purposes and utilizes the forward stepwise variable selection procedure in model-building. It also provides a new custom bootstrap function for mean and standard deviation estimation and functions for building crossplots and squareplots from a data set.
Calculation of gas transport properties (viscosity, diffusion, thermal conductivity) using Chapman-Enskok theory (Chapman 1918, <doi:10.1098/rsta.1918.0005>) and of the second virial coefficient (Vargas et al. 2001, <doi:10.1016/s0378-4371(00)00362-9>) using the Lennard-Jones (12-6) potential. Up to the third order correction is taken into account for viscosity and thermal conductivity. It is also possible to calculate the binary diffusion coefficients of polar and non-polar gases in non-polar bath gases (Brown et al. 2011, <doi:10.1016/j.pecs.2010.12.001>). 16 collision integrals are calculated with four digit accuracy over the reduced temperature range [0.3, 400] using an interpolation function of Kim and Monroe (2014, <doi:10.1016/j.jcp.2014.05.018>).
This package provides function to create, read, write, and work with iCalendar files (which typically have .ics or .ical extensions), and the scheduling data, calendars and timelines of people, organisations and other entities that they represent. iCalendar is an open standard for exchanging calendar and scheduling information between users and computers, described at <https://icalendar.org/>.