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r-lifttest 0.2.0
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=LiftTest
Licenses: GPL 3+
Synopsis: Bootstrap Proportion Test for Brand Lift Testing
Description:

This package provides a bootstrap proportion test for Brand Lift Testing to quantify the effectiveness of online advertising. Methods of the bootstrap proportion test are presented in Liu, Yu, Mao, Wu, Dyer (2023) <doi:10.1145/3583780.3615021>.

r-logicreg 1.6.6
Propagated dependencies: r-survival@3.8-3
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=LogicReg
Licenses: GPL 2+
Synopsis: Logic Regression
Description:

Routines for fitting Logic Regression models. Logic Regression is described in Ruczinski, Kooperberg, and LeBlanc (2003) <DOI:10.1198/1061860032238>. Monte Carlo Logic Regression is described in and Kooperberg and Ruczinski (2005) <DOI:10.1002/gepi.20042>.

r-manhplot 1.1
Propagated dependencies: r-reshape2@1.4.4 r-gridextra@2.3 r-ggrepel@0.9.6 r-ggplot2@3.5.2
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/cgrace1978/manhplot/
Licenses: GPL 2+
Synopsis: The Manhattan++ Plot
Description:

This plot integrates annotation into a manhattan plot. The plot is implemented as a heatmap, which is binned using -log10(p-value) and chromosome position. Annotation currently supported is minor allele frequency and gene function high impact variants.

r-mcartest 1.3
Propagated dependencies: r-rdpack@2.6.4 r-rcsdp@0.1.57.6 r-rcpp@1.0.14 r-rcdd@1.6 r-pracma@2.4.4 r-norm@1.0-11.1 r-missmethods@0.4.0 r-matrix@1.7-3 r-mass@7.3-65 r-lpsolve@5.6.23 r-highs@1.10.0-2 r-gtools@3.9.5 r-epi@2.59 r-copula@1.1-6
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=MCARtest
Licenses: Expat
Synopsis: Optimal Nonparametric Testing of Missing Completely at Random
Description:

This package provides functions for carrying out nonparametric hypothesis tests of the MCAR hypothesis based on the theory of Frechet classes and compatibility. Also gives functions for computing halfspace representations of the marginal polytope and related geometric objects.

r-multirng 1.2.4
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=MultiRNG
Licenses: GPL 2 GPL 3
Synopsis: Multivariate Pseudo-Random Number Generation
Description:

Pseudo-random number generation for 11 multivariate distributions: Normal, t, Uniform, Bernoulli, Hypergeometric, Beta (Dirichlet), Multinomial, Dirichlet-Multinomial, Laplace, Wishart, and Inverted Wishart. The details of the method are explained in Demirtas (2004) <DOI:10.22237/jmasm/1099268340>.

r-measures 0.3
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=measures
Licenses: GPL 3
Synopsis: Performance Measures for Statistical Learning
Description:

This package provides the biggest amount of statistical measures in the whole R world. Includes measures of regression, (multiclass) classification and multilabel classification. The measures come mainly from the mlr package and were programed by several mlr developers.

r-openoise 0.2-18
Propagated dependencies: r-tidyr@1.3.1 r-pracma@2.4.4 r-lubridate@1.9.4 r-ggplot2@3.5.2
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://arpapiemonte.github.io/openoise-analysis/
Licenses: GPL 3+
Synopsis: Environmental Noise Pollution Data Analysis
Description:

This package provides analyse, interpret and understand noise pollution data. Data are typically regular time series measured with sound meter. The package is partially described in Fogola, Grasso, Masera and Scordino (2023, <DOI:10.61782/fa.2023.0063>).

r-organizr 0.1.0
Propagated dependencies: r-stringr@1.5.1 r-rstudioapi@0.17.1 r-rlang@1.1.6 r-readr@2.1.5 r-here@1.0.1 r-fs@1.6.6
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://github.com/jobrachem/organizr
Licenses: Expat
Synopsis: Shortcuts for File Creation with Informative Prefixes
Description:

This package provides functions for quickly creating R and Python scripts, as well as Rmarkdown or Quarto documents with automatically assigned name prefixes. Prefixes are either file counts (e.g. "001") or dates (e.g. "2022-09-26").

r-pullword 0.3
Propagated dependencies: r-rcurl@1.98-1.17
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pullword
Licenses: LGPL 2.0+
Synopsis: R Interface to Pullword Service
Description:

R Interface to Pullword Service for natural language processing in Chinese. It enables users to extract valuable words from text by deep learning models. For more details please visit the official site (in Chinese) <http://www.pullword.com/>.

r-pedsuite 1.3.1
Propagated dependencies: r-verbalisr@0.7.2 r-segregatr@0.4.0 r-ribd@1.7.1 r-pedtools@2.8.2 r-pedprobr@1.0.1 r-pedmut@0.9.0 r-pedfamilias@0.2.4 r-pedbuildr@0.3.0 r-paramlink2@1.0.6 r-ibdsim2@2.3.0 r-forrel@1.8.1 r-dvir@3.3.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://magnusdv.github.io/pedsuite/
Licenses: GPL 3+
Synopsis: Easy Installation of the 'pedsuite' Packages for Pedigree Analysis
Description:

The pedsuite is a collection of packages for pedigree analysis, covering applications in forensic genetics, medical genetics and more. A detailed presentation of the pedsuite is given in the book Pedigree Analysis in R (Vigeland, 2021, ISBN: 9780128244302).

r-skylight 1.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/bluegreen-labs/skylight
Licenses: AGPL 3
Synopsis: Simple Sky Illuminance Model
Description:

This package provides a tool to calculate sky illuminance values (in lux) for both sun and moon. The model is a verbatim translation of the code by Janiczek and DeYoung (1987) <https://archive.org/details/DTIC_ADA182110>.

r-ssbtools 1.8.0
Propagated dependencies: r-matrix@1.7-3 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/statisticsnorway/ssb-ssbtools
Licenses: Expat
Synopsis: Algorithms and Tools for Tabular Statistics and Hierarchical Computations
Description:

Includes general data manipulation functions, algorithms for statistical disclosure control (Langsrud, 2024) <doi:10.1007/978-3-031-69651-0_6> and functions for hierarchical computations by sparse model matrices (Langsrud, 2023) <doi:10.32614/RJ-2023-088>.

r-survsens 1.1.0
Propagated dependencies: r-survival@3.8-3 r-reshape2@1.4.4 r-metr@0.18.1 r-interp@1.1-6 r-ggplot2@3.5.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/Rong0707/survSens
Licenses: GPL 2
Synopsis: Sensitivity Analysis with Time-to-Event Outcomes
Description:

This package performs a dual-parameter sensitivity analysis of treatment effect to unmeasured confounding in observational studies with either survival or competing risks outcomes. Huang, R., Xu, R. and Dulai, P.S.(2020) <doi:10.1002/sim.8672>.

r-swissair 1.1.6
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SwissAir
Licenses: GPL 3+
Synopsis: Air Quality Data of Switzerland for One Year in 30 Min Resolution
Description:

Ozone, NOx (= Sum of nitrogen monoxide and nitrogen dioxide), nitrogen monoxide, ambient temperature, dew point, wind speed and wind direction at 3 sites around lake of Lucerne in Central Switzerland in 30 min time resolution for year 2004.

r-sas7bdat 0.8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sas7bdat
Licenses: GPL 2+
Synopsis: sas7bdat Reverse Engineering Documentation
Description:

Documentation and prototypes for the earliest (circa 2010) open-source effort to reverse engineer the sas7bdat file format. The package includes a prototype reader for sas7bdat files. However, newer packages may contain more robust readers for sas7bdat files.

r-uniprotr 2.5.0
Propagated dependencies: r-tidyverse@2.0.0 r-stringr@1.5.1 r-scales@1.4.0 r-qdapregex@0.7.10 r-progress@1.2.3 r-plyr@1.8.9 r-networkd3@0.4.1 r-magrittr@2.0.3 r-magick@2.8.6 r-httr@1.4.7 r-htmlwidgets@1.6.4 r-gridextra@2.3 r-gprofiler2@0.2.3 r-ggsci@3.2.0 r-ggpubr@0.6.0 r-ggplot2@3.5.2 r-dplyr@1.1.4 r-data-tree@1.1.0 r-curl@6.2.3 r-alakazam@1.3.0
Channel: guix-cran
Location: guix-cran/packages/u.scm (guix-cran packages u)
Home page: https://github.com/Proteomicslab57357/UniprotR
Licenses: GPL 3
Synopsis: Retrieving Information of Proteins from Uniprot
Description:

Connect to Uniprot <https://www.uniprot.org/> to retrieve information about proteins using their accession number such information could be name or taxonomy information, For detailed information kindly read the publication <doi:10.1016/j.jprot.2019.103613>.

r-variosig 0.3-1
Propagated dependencies: r-testthat@3.2.3 r-sp@2.2-0 r-gstat@2.1-3
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=variosig
Licenses: GPL 3+
Synopsis: Testing Spatial Dependence Using Empirical Variogram
Description:

Applying Monte Carlo permutation to generate pointwise variogram envelope and checking for spatial dependence at different scales using permutation test. Empirical Brown's method and Fisher's method are used to compute overall p-value for hypothesis test.

r-cmdstanr 0.8.1.9000-1.a45d4f7
Propagated dependencies: r-checkmate@2.3.2 r-data-table@1.17.4 r-jsonlite@2.0.0 r-posterior@1.6.1 r-processx@3.8.6 r-r6@2.6.1 r-rlang@1.1.6 r-withr@3.0.2
Channel: guix
Location: gnu/packages/bioinformatics.scm (gnu packages bioinformatics)
Home page: https://github.com/stan-dev/cmdstanr
Licenses: Modified BSD
Synopsis: R interface to 'CmdStan'
Description:

This package provides a lightweight interface to Stan <https://mc-stan.org>. The CmdStanR interface is an alternative to RStan that calls the command line interface for compilation and running algorithms instead of interfacing with C++ via Rcpp'.

r-maptools 1.1-8
Propagated dependencies: r-foreign@0.8-90 r-lattice@0.22-7 r-sp@2.2-0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://r-forge.r-project.org/projects/maptools/
Licenses: GPL 2+ Expat
Synopsis: Tools for reading and handling spatial objects
Description:

This package provides a set of tools for manipulating and reading geographic data, in particular ESRI Shapefiles. It includes binary access to GSHHG shoreline files. The package also provides interface wrappers for exchanging spatial objects with other R packages.

r-climatol 4.2-0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: http://www.climatol.eu/
Licenses: GPL 2+
Synopsis: Climate tools
Description:

This package provides functions for the quality control, homogenization and missing data infilling of climatological series, and to obtain climatological summaries and grids from the results. Also functions to draw wind-roses and Walter&Lieth climate diagrams are included.

r-rstanbdp 0.0.3
Propagated dependencies: r-stanheaders@2.32.10 r-rstantools@2.4.0 r-rstan@2.32.7 r-rrcov@1.7-7 r-rcppparallel@5.1.10 r-rcppeigen@0.3.4.0.2 r-rcpp@1.0.14 r-mixtools@2.0.0.1 r-kernsmooth@2.23-26 r-bh@1.87.0-1 r-bayestestr@0.16.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rstanbdp
Licenses: GPL 3+
Synopsis: Bayesian Deming Regression for Method Comparison
Description:

Regression methods to quantify the relation between two measurement methods are provided by this package. The focus is on a Bayesian Deming regressions family. With a Bayesian method the Deming regression can be run in a traditional fashion or can be run in a robust way just decreasing the degree of freedom d.f. of the sampling distribution. With d.f. = 1 an extremely robust Cauchy distribution can be sampled. Moreover, models for dealing with heteroscedastic data are also provided. For reference see G. Pioda (2024) <https://piodag.github.io/bd1/>.

r-rdocdump 0.1.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/e-kotov/rdocdump
Licenses: Expat
Synopsis: Dump 'R' Package Source, Documentation, and Vignettes into One File
Description:

Dump source code, documentation and vignettes of an R package into a single file. Supports installed packages, tar.gz archives, and package source directories. If the package is not installed, only its source is automatically downloaded from CRAN for processing. The output is a single plain text file or a character vector, which is useful to ingest complete package documentation and source into a large language model (LLM) or pass it further to other tools, such as ragnar <https://github.com/tidyverse/ragnar> to create a Retrieval-Augmented Generation (RAG) workflow.

r-regtools 1.7.0
Propagated dependencies: r-text2vec@0.6.4 r-sandwich@3.1-1 r-rje@1.12.1 r-r-utils@2.13.0 r-polyreg@0.8.0 r-mvtnorm@1.3-3 r-mass@7.3-65 r-gtools@3.9.5 r-glmnet@4.1-8 r-fnn@1.1.4.1 r-data-table@1.17.4 r-car@3.1-3
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/matloff/regtools
Licenses: GPL 2+
Synopsis: Regression and Classification Tools
Description:

This package provides tools for linear, nonlinear and nonparametric regression and classification. Novel graphical methods for assessment of parametric models using nonparametric methods. One vs. All and All vs. All multiclass classification, optional class probabilities adjustment. Nonparametric regression (k-NN) for general dimension, local-linear option. Nonlinear regression with Eickert-White method for dealing with heteroscedasticity. Utilities for converting time series to rectangular form. Utilities for conversion between factors and indicator variables. Some code related to "Statistical Regression and Classification: from Linear Models to Machine Learning", N. Matloff, 2017, CRC, ISBN 9781498710916.

rocdbg-api 6.2.2
Dependencies: libbacktrace@1.0-2.cdb64b6 hwdata@0.391 rocm-comgr@6.2.2 hipamd@6.2.2
Channel: guix-hpc
Location: amd/packages/rocm-libs.scm (amd packages rocm-libs)
Home page: https://github.com/ROCm/ROCdbgapi
Licenses: Expat
Synopsis: ROCm debugger API.
Description:

The AMD Debugger API is a library that provides all the support necessary for a debugger and other tools to perform low level control of the execution and inspection of execution state of AMD's commercially available GPU architectures.

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