r-edaseq 2.40.0
Propagated dependencies: r-annotationdbi@1.68.0 r-aroma-light@3.36.0 r-biobase@2.66.0 r-biocgenerics@0.52.0 r-biocmanager@1.30.25 r-biomart@2.62.0 r-biostrings@2.74.0 r-genomicfeatures@1.58.0 r-genomicranges@1.58.0 r-iranges@2.40.0 r-rsamtools@2.22.0 r-shortread@1.64.0
Channel: guix
Home page: https://github.com/drisso/EDASeq
Licenses: Artistic License 2.0
Synopsis: Exploratory data analysis and normalization for RNA-Seq
Description:
This package provides support for numerical and graphical summaries of RNA-Seq genomic read data. Provided within-lane normalization procedures to adjust for GC-content effect (or other gene-level effects) on read counts: loess robust local regression, global-scaling, and full-quantile normalization. Between-lane normalization procedures to adjust for distributional differences between lanes (e.g., sequencing depth): global-scaling and full-quantile normalization.
Total results: 1