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Most universities use specific color combinations to express their unique brand identity. The unicol package provides the colors and color palettes of various universities for easy plotting and printing in R. We collect and provide a diverse range of color palettes for creating scientific visualizations.
This package provides a set of functions leading to multivariate response L1 regression. This includes functions on computing Euclidean inner products and norms, weighted least squares estimates on multivariate responses, function to compute fitted values and residuals. This package is a companion to the book "U-Statistics, M-estimation and Resampling", by Arup Bose and Snigdhansu Chatterjee, to appear in 2017 as part of the "Texts and Readings in Mathematics" (TRIM) series of Hindustan Book Agency and Springer-Verlag.
Automatically converts language-specific verbal information, e.g., "1st half of the 19th century," to its standardized numerical counterparts, e.g., "1801-01-01/1850-12-31." It follows the recommendations of the MIDAS ('Marburger Informations-, Dokumentations- und Administrations-System'), see <doi:10.11588/artdok.00003770>.
This package provides a tool to define the rare biosphere. ulrb solves the problem of the definition of rarity by replacing arbitrary thresholds with an unsupervised machine learning algorithm (partitioning around medoids, or k-medoids). This algorithm works for any type of microbiome data, provided there is an abundance table. This method also works for non-microbiome data.
This package provides a comprehensive educational package combining clustering algorithms with detailed step-by-step explanations. Provides implementations of both traditional (hierarchical, k-means) and modern (Density-Based Spatial Clustering of Applications with Noise (DBSCAN), Gaussian Mixture Models (GMM), genetic k-means) clustering methods as described in Ezugwu et. al., (2022) <doi:10.1016/j.engappai.2022.104743>. Includes educational datasets highlighting different clustering challenges, based on scikit-learn examples (Pedregosa et al., 2011) <https://jmlr.csail.mit.edu/papers/v12/pedregosa11a.html>. Features detailed algorithm explanations, visualizations, and weighted distance calculations for enhanced learning.
Compiled and cleaned the county-level estimates of fertilizer, nitrogen and phosphorus, from 1945 to 2012 in United States of America (USA). The commercial fertilizer data were originally generated by USGS based on the sales data of commercial fertilizer. The manure data were estimated based on county-level population data of livestock, poultry, and other animals. See the user manual for detailed data sources and cleaning methods. usfertilizer utilized the tidyverse to clean the original data and provide user-friendly dataframe. Please note that USGS does not endorse this package. Also data from 1986 is not available for now.
Historical voting data of the United Nations General Assembly. This includes votes for each country in each roll call, as well as descriptions and topic classifications for each vote.
This package provides a set of regular time-series datasets, describing the US electricity grid. That includes the total demand and supply, and as well as the demand by energy source (coal, solar, wind, etc.). Source: US Energy Information Administration (Dec 2019) <https://www.eia.gov/>.
This package implements the Gaussian method of first and second order, the Kragten numerical method and the Monte Carlo simulation method for uncertainty estimation and analysis.
Calculates one-sample unbiased central moment estimates and two-sample pooled estimates up to 6th order, including estimates of powers and products of central moments. Provides the machinery for obtaining unbiased central moment estimators beyond 6th order by generating expressions for expectations of raw sample moments and their powers and products. Gerlovina and Hubbard (2019) <doi:10.1080/25742558.2019.1701917>.
This package provides functions for the creation and manipulation of scenes and objects within the Unity 3D video game engine (<https://unity.com/>). Specific focuses include the creation and import of terrain data and GameObjects as well as scene management.
This package provides decorators, transformators, and utility functions to extend the teal framework for interactive data analysis applications. Implements methods for data visualization enhancement, statistical data transformations, and workflow integration tools. Designed to support clinical and pharmaceutical research workflows within the teal ecosystem through modular and reusable components.
Calculates federal and state income taxes in the United States. It acts as a wrapper to the NBER's TAXSIM 35 (<http://taxsim.nber.org/taxsim35/>) tax simulator. TAXSIM 35 conducts the calculations, while usincometaxes prepares the data for TAXSIM 35, sends the data to TAXSIM 35's server or communicates with the Web Assembly file, retrieves the data, and places it into a data frame. All without the user worrying about this process.
Bindings to system utilities found in most Unix systems such as POSIX functions which are not part of the Standard C Library.
This package provides a fast and simple URL parser package for R'. This package provides functions to parse URLs into their components, such as scheme, user, password, host, port, path, query, and fragment.
Variance approximations for the Horvitz-Thompson total estimator in Unequal Probability Sampling using only first-order inclusion probabilities. See Matei and Tillé (2005) and Haziza, Mecatti and Rao (2008) for details.
Supervised classification methods, which (if asked) can provide step-by-step explanations of the algorithms used, as described in PK Josephine et. al., (2021) <doi:10.59176/kjcs.v1i1.1259>; and datasets to test them on, which highlight the strengths and weaknesses of each technique.
This package provides a set of general functions that I have used in various projects and other R packages. Miscellaneous operations on data frames, matrices and vectors, ROC and PR statistics.
The Unmanned Aerial Vehicle Mission Planner provides an easy to use work flow for planning autonomous obstacle avoiding surveys of ready to fly unmanned aerial vehicles to retrieve aerial or spot related data. It creates either intermediate flight control files for the DJI-Litchi supported series or ready to upload control files for the pixhawk-based flight controller. Additionally it contains some useful tools for digitizing and data manipulation.
Elasticsearch is an open-source, distributed, document-based datastore (<https://www.elastic.co/products/elasticsearch>). It provides an HTTP API for querying the database and extracting datasets, but that API was not designed for common data science workflows like pulling large batches of records and normalizing those documents into a data frame that can be used as a training dataset for statistical models. uptasticsearch provides an interface for Elasticsearch that is explicitly designed to make these data science workflows easy and fun.
Comprehensive analysis and forecasting of univariate time series using automatic time series models of many kinds. Harvey AC (1989) <doi:10.1017/CBO9781107049994>. Pedregal DJ and Young PC (2002) <doi:10.1002/9780470996430>. Durbin J and Koopman SJ (2012) <doi:10.1093/acprof:oso/9780199641178.001.0001>. Hyndman RJ, Koehler AB, Ord JK, and Snyder RD (2008) <doi:10.1007/978-3-540-71918-2>. Gómez V, Maravall A (2000) <doi:10.1002/9781118032978>. Pedregal DJ, Trapero JR and Holgado E (2024) <doi:10.1016/j.ijforecast.2023.09.004>.
Centers of population (centroid) data for census areas in the United States.
This package provides functions and a Shiny application for downloading, analyzing and visualizing datasets from UCSC Xena (<http://xena.ucsc.edu/>), which is a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others.
Separate a data frame in two based on key columns. The function unjoin() provides an inside-out version of a nested data frame. This is used to identify duplication and normalize it (in the database sense) by linking two tables with the redundancy removed. This is a basic requirement for detecting topology within spatial structures that has motivated the need for this package as a building block for workflows within more applied projects.