_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-pd-mogene-1-0-st-v1 3.14.1
Propagated dependencies: r-s4vectors@0.46.0 r-rsqlite@2.3.11 r-oligoclasses@1.70.0 r-oligo@1.72.0 r-iranges@2.42.0 r-dbi@1.2.3 r-biostrings@2.76.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.mogene.1.0.st.v1
Licenses: Artistic License 2.0
Synopsis: Platform Design Info for Affymetrix MoGene-1_0-st-v1
Description:

Platform Design Info for Affymetrix MoGene-1_0-st-v1.

r-pd-hg-u219 3.12.0
Propagated dependencies: r-s4vectors@0.46.0 r-rsqlite@2.3.11 r-oligoclasses@1.70.0 r-oligo@1.72.0 r-iranges@2.42.0 r-dbi@1.2.3 r-biostrings@2.76.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.hg.u219
Licenses: Artistic License 2.0
Synopsis: Platform Design Info for The Manufacturer's Name HG-U219
Description:

Platform Design Info for The Manufacturer's Name HG-U219.

r-pd-drogene-1-0-st 3.12.0
Propagated dependencies: r-s4vectors@0.46.0 r-rsqlite@2.3.11 r-oligoclasses@1.70.0 r-oligo@1.72.0 r-iranges@2.42.0 r-dbi@1.2.3 r-biostrings@2.76.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.drogene.1.0.st
Licenses: Artistic License 2.0
Synopsis: Platform Design Info for Affymetrix DroGene-1_0-st
Description:

Platform Design Info for Affymetrix DroGene-1_0-st.

r-phyloprofiledata 1.24.0
Propagated dependencies: r-experimenthub@2.16.0 r-biostrings@2.76.0 r-biocstyle@2.36.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://github.com/BIONF/PhyloProfileData
Licenses: Expat
Synopsis: Data package for phylogenetic profile analysis using PhyloProfile tool
Description:

Two experimental datasets to illustrate running and analysing phylogenetic profiles with PhyloProfile package.

r-peakcombiner 1.0.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://github.com/novartis/peakCombiner/
Licenses: Expat
Synopsis: The R package to curate and merge enriched genomic regions into consensus peak sets
Description:

peakCombiner, a fully R based, user-friendly, transparent, and customizable tool that allows even novice R users to create a high-quality consensus peak list. The modularity of its functions allows an easy way to optimize input and output data. A broad range of accepted input data formats can be used to create a consensus peak set that can be exported to a file or used as the starting point for most downstream peak analyses.

r-panomir 1.14.0
Propagated dependencies: r-withr@3.0.2 r-tibble@3.2.1 r-rlang@1.1.6 r-rcolorbrewer@1.1-3 r-preprocesscore@1.70.0 r-org-hs-eg-db@3.21.0 r-metap@1.12 r-limma@3.64.1 r-igraph@2.1.4 r-gseabase@1.70.0 r-forcats@1.0.0 r-dplyr@1.1.4 r-clusterprofiler@4.16.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://github.com/pouryany/PanomiR
Licenses: Expat
Synopsis: Detection of miRNAs that regulate interacting groups of pathways
Description:

PanomiR is a package to detect miRNAs that target groups of pathways from gene expression data. This package provides functionality for generating pathway activity profiles, determining differentially activated pathways between user-specified conditions, determining clusters of pathways via the PCxN package, and generating miRNAs targeting clusters of pathways. These function can be used separately or sequentially to analyze RNA-Seq data.

r-pd-clariom-s-human 3.14.1
Propagated dependencies: r-s4vectors@0.46.0 r-rsqlite@2.3.11 r-oligoclasses@1.70.0 r-oligo@1.72.0 r-iranges@2.42.0 r-dbi@1.2.3 r-biostrings@2.76.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.clariom.s.human
Licenses: Artistic License 2.0
Synopsis: Platform Design Info for Affymetrix Clariom_S_Human
Description:

Platform Design Info for Affymetrix Clariom_S_Human.

r-pd-guigene-1-1-st 3.12.0
Propagated dependencies: r-s4vectors@0.46.0 r-rsqlite@2.3.11 r-oligoclasses@1.70.0 r-oligo@1.72.0 r-iranges@2.42.0 r-dbi@1.2.3 r-biostrings@2.76.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.guigene.1.1.st
Licenses: Artistic License 2.0
Synopsis: Platform Design Info for Affymetrix GuiGene-1_1-st
Description:

Platform Design Info for Affymetrix GuiGene-1_1-st.

r-poem 1.2.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://roseyuan.github.io/poem/
Licenses: GPL 3+
Synopsis: POpulation-based Evaluation Metrics
Description:

This package provides a comprehensive set of external and internal evaluation metrics. It includes metrics for assessing partitions or fuzzy partitions derived from clustering results, as well as for evaluating subpopulation identification results within embeddings or graph representations. Additionally, it provides metrics for comparing spatial domain detection results against ground truth labels, and tools for visualizing spatial errors.

r-poplarcdf 2.18.0
Propagated dependencies: r-annotationdbi@1.70.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/poplarcdf
Licenses: LGPL 2.0+
Synopsis: poplarcdf
Description:

This package provides a package containing an environment representing the Poplar.cdf file.

r-prostatecancergrasso 1.38.0
Propagated dependencies: r-biobase@2.68.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/prostateCancerGrasso
Licenses: Artistic License 2.0
Synopsis: Prostate Cancer Data
Description:

This package provides a Bioconductor data package for the Grasso (2012) Prostate Cancer dataset.

r-pd-2006-07-18-hg18-refseq-promoter 1.8.1
Propagated dependencies: r-rsqlite@2.3.11 r-oligoclasses@1.70.0 r-oligo@1.72.0 r-iranges@2.42.0 r-dbi@1.2.3 r-biostrings@2.76.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.2006.07.18.hg18.refseq.promoter
Licenses: Artistic License 2.0
Synopsis: Platform Design Info for NimbleGen 2006-07-18_hg18_refseq_promoter
Description:

Platform Design Info for NimbleGen 2006-07-18_hg18_refseq_promoter.

r-prostatecancervarambally 1.38.0
Propagated dependencies: r-biobase@2.68.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/prostateCancerVarambally
Licenses: Artistic License 2.0
Synopsis: Prostate Cancer Data
Description:

This package provides a Bioconductor data package for the Varambally dataset.

r-pd-zebgene-1-0-st 3.12.0
Propagated dependencies: r-s4vectors@0.46.0 r-rsqlite@2.3.11 r-oligoclasses@1.70.0 r-oligo@1.72.0 r-iranges@2.42.0 r-dbi@1.2.3 r-biostrings@2.76.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.zebgene.1.0.st
Licenses: Artistic License 2.0
Synopsis: Platform Design Info for Affymetrix ZebGene-1_0-st
Description:

Platform Design Info for Affymetrix ZebGene-1_0-st.

r-periodicdna 1.20.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://github.com/js2264/periodicDNA
Licenses: FSDG-compatible
Synopsis: Set of tools to identify periodic occurrences of k-mers in DNA sequences
Description:

This R package helps the user identify k-mers (e.g. di- or tri-nucleotides) present periodically in a set of genomic loci (typically regulatory elements). The functions of this package provide a straightforward approach to find periodic occurrences of k-mers in DNA sequences, such as regulatory elements. It is not aimed at identifying motifs separated by a conserved distance; for this type of analysis, please visit MEME website.

r-primeviewcdf 2.18.0
Propagated dependencies: r-annotationdbi@1.70.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/primeviewcdf
Licenses: LGPL 2.0+
Synopsis: primeviewcdf
Description:

This package provides a package containing an environment representing the PrimeView.cdf file.

r-plotgardener 1.16.0
Propagated dependencies: r-withr@3.0.2 r-strawr@0.0.92 r-rlang@1.1.6 r-rhdf5@2.52.0 r-rcpp@1.0.14 r-rcolorbrewer@1.1-3 r-purrr@1.0.4 r-plyranges@1.28.0 r-iranges@2.42.0 r-glue@1.8.0 r-ggplotify@0.1.2 r-genomicranges@1.60.0 r-genomeinfodb@1.44.0 r-dplyr@1.1.4 r-data-table@1.17.4 r-curl@6.2.3
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://phanstiellab.github.io/plotgardener
Licenses: Expat
Synopsis: Coordinate-Based Genomic Visualization Package for R
Description:

Coordinate-based genomic visualization package for R. It grants users the ability to programmatically produce complex, multi-paneled figures. Tailored for genomics, plotgardener allows users to visualize large complex genomic datasets and provides exquisite control over how plots are placed and arranged on a page.

r-pd-felgene-1-1-st 3.12.0
Propagated dependencies: r-s4vectors@0.46.0 r-rsqlite@2.3.11 r-oligoclasses@1.70.0 r-oligo@1.72.0 r-iranges@2.42.0 r-dbi@1.2.3 r-biostrings@2.76.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.felgene.1.1.st
Licenses: Artistic License 2.0
Synopsis: Platform Design Info for Affymetrix FelGene-1_1-st
Description:

Platform Design Info for Affymetrix FelGene-1_1-st.

r-pd-chogene-2-1-st 3.12.0
Propagated dependencies: r-s4vectors@0.46.0 r-rsqlite@2.3.11 r-oligoclasses@1.70.0 r-oligo@1.72.0 r-iranges@2.42.0 r-dbi@1.2.3 r-biostrings@2.76.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.chogene.2.1.st
Licenses: Artistic License 2.0
Synopsis: Platform Design Info for Affymetrix CHOGene-2_1-st
Description:

Platform Design Info for Affymetrix CHOGene-2_1-st.

r-pd-margene-1-0-st 3.12.0
Propagated dependencies: r-s4vectors@0.46.0 r-rsqlite@2.3.11 r-oligoclasses@1.70.0 r-oligo@1.72.0 r-iranges@2.42.0 r-dbi@1.2.3 r-biostrings@2.76.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.margene.1.0.st
Licenses: Artistic License 2.0
Synopsis: Platform Design Info for Affymetrix MarGene-1_0-st
Description:

Platform Design Info for Affymetrix MarGene-1_0-st.

r-pig-db0 3.22.0
Propagated dependencies: r-annotationdbi@1.70.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pig.db0
Licenses: Artistic License 2.0
Synopsis: Base Level Annotation databases for pig
Description:

Base annotation databases for pig, intended ONLY to be used by AnnotationDbi to produce regular annotation packages.

r-pd-vitis-vinifera 3.12.0
Propagated dependencies: r-s4vectors@0.46.0 r-rsqlite@2.3.11 r-oligoclasses@1.70.0 r-oligo@1.72.0 r-iranges@2.42.0 r-dbi@1.2.3 r-biostrings@2.76.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.vitis.vinifera
Licenses: Artistic License 2.0
Synopsis: Platform Design Info for The Manufacturer's Name Vitis_Vinifera
Description:

Platform Design Info for The Manufacturer's Name Vitis_Vinifera.

r-pd-sugar-cane 3.12.0
Propagated dependencies: r-s4vectors@0.46.0 r-rsqlite@2.3.11 r-oligoclasses@1.70.0 r-oligo@1.72.0 r-iranges@2.42.0 r-dbi@1.2.3 r-biostrings@2.76.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.sugar.cane
Licenses: Artistic License 2.0
Synopsis: Platform Design Info for The Manufacturer's Name Sugar_Cane
Description:

Platform Design Info for The Manufacturer's Name Sugar_Cane.

r-pd-drogene-1-1-st 3.12.0
Propagated dependencies: r-s4vectors@0.46.0 r-rsqlite@2.3.11 r-oligoclasses@1.70.0 r-oligo@1.72.0 r-iranges@2.42.0 r-dbi@1.2.3 r-biostrings@2.76.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.drogene.1.1.st
Licenses: Artistic License 2.0
Synopsis: Platform Design Info for Affymetrix DroGene-1_1-st
Description:

Platform Design Info for Affymetrix DroGene-1_1-st.

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Total results: 45109