_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel search send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


superdirt 1.7.3
Dependencies: supercollider@3.14.0
Propagated dependencies: supercollider@3.14.0
Channel: zzkt
Location: zzkt/packages/tidal.scm (zzkt packages tidal)
Home page: https://github.com/musikinformatik/SuperDirt/
Licenses: GPL 3+
Build system: gnu
Synopsis: Tidal Audio Engine
Description:

SuperCollider implementation of the Dirt sampler, originally designed for the TidalCycles environment. SuperDirt is a general purpose framework for playing samples and synths, controllable over the Open Sound Control protocol, and locally from the SuperCollider language.

tidal 1.9.4
Dependencies: ghc-colour@2.3.6 ghc-hosc@0.20 ghc-network@3.1.4.0 ghc-clock@0.8.3 ghc-primitive@0.7.3.0 ghc-random@1.2.1.1 ghc-tidal-link@1.0.1
Channel: zzkt
Location: zzkt/packages/tidal.scm (zzkt packages tidal)
Home page: http://tidalcycles.org/
Licenses: GPL 3
Build system: haskell
Synopsis: Pattern language for improvised music
Description:

Tidal is a domain specific language for live coding patterns.

ghc-data-binary-ieee754 0.4.4
Channel: zzkt
Location: zzkt/packages/tidal.scm (zzkt packages tidal)
Home page: https://john-millikin.com/software/data-binary-ieee754/
Licenses: Expat
Build system: haskell
Synopsis: Parser/Serialiser for IEEE-754 floating-point values
Description:

Convert Float and Decimal values to/from raw octets.

ghc-tidal-link 1.0.1
Channel: zzkt
Location: zzkt/packages/tidal.scm (zzkt packages tidal)
Home page: http://tidalcycles.org/
Licenses:
Build system: haskell
Synopsis: Ableton Link integration for Tidal
Description:

Ableton Link integration for Tidal, to let Tidal sync with external clocks

zotero 0.0.0
Channel: zzkt
Location: zzkt/packages/zotero.scm (zzkt packages zotero)
Home page: https://www.gnu.org/software/hello/
Licenses: GPL 3+
Build system: gnu
Synopsis: Hello, GNU world: An example GNU package
Description:

GNU Hello prints the message "Hello, world!" and then exits. It serves as an example of standard GNU coding practices. As such, it supports command-line arguments, multiple languages, and so on.

argweaver 0.8.1
Propagated dependencies: python2@2.7.18
Channel: guix-arg
Location: guix-arg/packages/argweaver.scm (guix-arg packages argweaver)
Home page: https://mdrasmus.github.io/argweaver
Licenses: Expat
Build system: gnu
Synopsis: Ancestral recombination graph sampling method
Description:

Ancestral recombination graph sampling method.

shapeit4 4.2.2
Dependencies: boost@1.89.0 curl@8.6.0 htslib@1.21 openssl@3.0.8 zlib@1.3.1
Channel: guix-arg
Location: guix-arg/packages/bioinformatics.scm (guix-arg packages bioinformatics)
Home page: https://odelaneau.github.io/shapeit4/
Licenses: Expat
Build system: gnu
Synopsis: Segmented HAPlotype Estimation and Imputation Tool
Description:

SHAPEIT4 is a fast and accurate method for estimation of haplotypes (aka phasing) for SNP array and sequencing data.

shapeit5 5.1.1
Dependencies: boost@1.89.0 curl@8.6.0 htslib@1.21 libdeflate@1.19 openssl@3.0.8 xcftools@0.1.1 zlib@1.3.1
Propagated dependencies: xcftools@0.1.1
Channel: guix-arg
Location: guix-arg/packages/bioinformatics.scm (guix-arg packages bioinformatics)
Home page: https://odelaneau.github.io/shapeit5/
Licenses: Expat
Build system: gnu
Synopsis: Segmented HAPlotype Estimation and Imputation Tool
Description:

SHAPEIT4 is a fast and accurate method for estimation of haplotypes (aka phasing) for SNP array and sequencing data.

python-whatshap 2.8
Propagated dependencies: python-biopython@1.85 python-networkx@3.4.2 python-pulp@2.4 python-pyfaidx@0.7.2.1 python-pysam@0.23.0 python-scipy@1.12.0 python-xopen@1.8.0
Channel: guix-arg
Location: guix-arg/packages/bioinformatics.scm (guix-arg packages bioinformatics)
Home page: https://github.com/whatshap/whatshap
Licenses:
Build system: pyproject
Synopsis: Phase genomic variants using DNA sequencing reads
Description:

phase genomic variants using DNA sequencing reads.

xcftools 0.1.1
Dependencies: boost@1.89.0 curl@8.6.0 htslib@1.21 zlib@1.3.1
Channel: guix-arg
Location: guix-arg/packages/bioinformatics.scm (guix-arg packages bioinformatics)
Home page: https://odelaneau.github.io/xcftools/
Licenses: Expat
Build system: gnu
Synopsis: Set of tools for handling XCF files
Description:

Set of tools for handling XCF files

sapphire 1.0.0-97768d8
Channel: guix-arg
Location: guix-arg/packages/bioinformatics.scm (guix-arg packages bioinformatics)
Home page: https://github.com/rwk-unil/sapphire
Licenses: Expat
Build system: gnu
Synopsis: Smart and Accurate Polishing of Phased Haplotypes Integrating Read Enhancements (SAPPHIRE)
Description:

Smart and Accurate Polishing of Phased Haplotypes Integrating Read Enhancements (SAPPHIRE)

python-pysam-stubs 0.18.0.0.2
Channel: guix-arg
Location: guix-arg/packages/bioinformatics.scm (guix-arg packages bioinformatics)
Home page: https://github.com/marcelm/pysam-stubs/
Licenses:
Build system: pyproject
Synopsis:
#<unspecified>
impute5 1.2.0
Channel: guix-arg
Location: guix-arg/packages/bioinformatics.scm (guix-arg packages bioinformatics)
Home page: https://jmarchini.org/software/
Licenses:
Build system: copy
Synopsis: Genotype imputation method
Description:

IMPUTE 5 is a genotype imputation method that can scale to reference panels with millions of samples. This method continues to refine the observation made in the IMPUTE2 method, that accuracy is optimized via use of a custom subset of haplotypes when imputing each individual. It achieves fast, accurate, and memory-efficient imputation by selecting haplotypes using the Positional Burrows Wheeler Transform (PBWT). By using the PBWT data structure at genotyped markers, IMPUTE 5 identifies locally best matching haplotypes and long identical by state segments. The method then uses the selected haplotypes as conditioning states within the IMPUTE model.

polegon 0.1.3
Channel: guix-arg
Location: guix-arg/packages/polegon.scm (guix-arg packages polegon)
Home page: https://github.com/YunDeng98/POLEGON
Licenses: Expat
Build system: gnu
Synopsis: Prior-Oblivious Length Estimation in Genealogies with Oriented Network
Description:

POLEGON stands for Prior-Oblivious Length Estimation in Genealogies with Oriented Network. POLEGON works with inferred Ancestral Recombination Graph (ARG) to re-calibrate the branch length, without the usage of any prior.

python-tseda 0.1
Propagated dependencies: python-appdirs@1.4.4 python-cartopy@0.24.1 python-click@8.1.8 python-contourpy@1.3.2 python-daiquiri@3.0.1 python-dask@2024.12.1 python-diskcache@5.6.3 python-geoviews@1.14.1 python-holoviews@1.20.2 python-numba@0.61.0 python-panel@1.6.1 python-tsbrowse@0.1.1 python-tskit@1.0.2 python-tszip@0.3.1 python-xyzservices-next@2025.4.0
Channel: guix-arg
Location: guix-arg/packages/python-arg.scm (guix-arg packages python-arg)
Home page: https://github.com/percyfal/tseda
Licenses: Expat
Build system: pyproject
Synopsis: Utilities for converting tree sequences to and from other formats
Description:

Utilities for converting tree sequences to and from other formats

python-espalier 0.1.2
Propagated dependencies: python-biopython@1.85 python-click@8.1.8 python-dendropy@4.5.1 python-numpy@1.26.4 python-pandas@2.2.3 python-scipy@1.12.0 python-tskit@1.0.2
Channel: guix-arg
Location: guix-arg/packages/python-arg.scm (guix-arg packages python-arg)
Home page: https://github.com/davidrasm/Espalier
Licenses: ASL 2.0
Build system: pyproject
Synopsis: Espalier is a Python package for working with discordant phylogenetic trees using maximum agreement forests
Description:

Espalier is a Python package for working with discordant phylogenetic trees using maximum agreement forests.

python-sparg 2.0.0
Propagated dependencies: python-ipywidgets@8.1.2 python-matplotlib@3.8.2 python-numpy@1.26.4 python-pandas@2.2.3 python-scipy@1.12.0 python-sympy@1.13.3 python-tqdm@4.67.1 python-tskit@1.0.2
Channel: guix-arg
Location: guix-arg/packages/python-arg.scm (guix-arg packages python-arg)
Home page: https://github.com/osmond-lab/sparg
Licenses: GPL 3
Build system: pyproject
Synopsis: Spatial inference from ancestral recombination graphs
Description:

Spatial inference from ancestral recombination graphs

python-tscompare 0.2.1
Propagated dependencies: python-tskit@1.0.2 python-scipy@1.12.0
Channel: guix-arg
Location: guix-arg/packages/python-arg.scm (guix-arg packages python-arg)
Home page: https://tskit.dev/tscompare
Licenses: Expat
Build system: pyproject
Synopsis: Utilities for comparing tree sequences
Description:

Utilities for comparing tree sequences

python-fastgaia 0.1.2
Propagated dependencies: python-numpy@1.26.4 python-pandas@2.2.3 python-tskit@1.0.2
Channel: guix-arg
Location: guix-arg/packages/python-arg.scm (guix-arg packages python-arg)
Home page: https://github.com/chris-a-talbot/fastgaia
Licenses: Expat
Build system: pyproject
Synopsis: A tool to infer node locations and states from tree sequences.
Description:

This package provides a tool to infer node locations and states from tree sequences.

python-twisst2 0.0.5
Propagated dependencies: python-cyvcf2@0.31.2 python-numpy@1.26.4 python-sticcs@0.0.5 python-tskit@1.0.2
Channel: guix-arg
Location: guix-arg/packages/python-arg.scm (guix-arg packages python-arg)
Home page: https://github.com/simonhmartin/twisst2
Licenses: Expat
Build system: pyproject
Synopsis: Topology weighting from unphased genotypes of any ploidy.
Description:

Topology weighting from unphased genotypes of any ploidy.

python-tszip 0.3.1
Propagated dependencies: python-humanize@4.14.0 python-numcodecs@0.13.1 python-numpy@1.26.4 python-tskit@1.0.2 python-zarr@2.18.7
Channel: guix-arg
Location: guix-arg/packages/python-arg.scm (guix-arg packages python-arg)
Home page: https://github.com/tskit-dev/tszip
Licenses: Expat
Build system: pyproject
Synopsis: Compression utilities for tree sequences
Description:

Compression utilities for tree sequences.

python-arg-lmm 0.1.1
Propagated dependencies: python-arg-needle-lib@1.2.1
Channel: guix-arg
Location: guix-arg/packages/python-arg.scm (guix-arg packages python-arg)
Home page: https://github.com/PalamaraLab/arg-lmm
Licenses:
Build system: pyproject
Synopsis: Efficient complex trait analyses from ARG
Description:

Efficient complex trait analyses from ARG.

python-tsbrowse 0.1.1
Propagated dependencies: python-click@8.1.8 python-daiquiri@3.0.1 python-datashader@0.18.1 python-hvplot@0.12.1 python-matplotlib@3.8.2 python-panel@1.6.1 python-tskit@1.0.2 python-tszip@0.3.1
Channel: guix-arg
Location: guix-arg/packages/python-arg.scm (guix-arg packages python-arg)
Home page: https://tskit.dev/pinned/
Licenses: Expat
Build system: pyproject
Synopsis: Webapp to view and visualise the information structure in tskit ARGs
Description:

Webapp to view and visualise the information structure in tskit ARGs

python-tslmm 0.0.1
Propagated dependencies: python-numba@0.61.0 python-numpy@1.26.4 python-scipy@1.12.0 python-tskit@1.0.2
Channel: guix-arg
Location: guix-arg/packages/python-arg.scm (guix-arg packages python-arg)
Home page: https://github.com/hanbin973/tslmm
Licenses: Expat
Build system: pyproject
Synopsis: Linear mixed models from ancestral recombination graphs.
Description:

Linear mixed models from ancestral recombination graphs.

Total packages: 69226