Grammatical evolution (see O'Neil, M. and Ryan, C. (2003,ISBN:1-4020-7444-1)) uses decoders to convert linear (binary or integer genes) into programs. In addition, automatic determination of codon precision with a limited rule choice bias is provided. For a recent survey of grammatical evolution, see Ryan, C., O'Neill, M., and Collins, J. J. (2018) <doi:10.1007/978-3-319-78717-6>.

This package provides tools to download and merge data files on sub-national conflict, violence and protests from <http://www.x-sub.org>.

Helpers for transforming XML content into number of tables while preserving parent to child relationships.

This package provides tools to analyze sex differences in omics data for complex diseases. It includes functions for differential expression analysis using the limma method <doi:10.1093/nar/gkv007>, interaction testing between sex and disease, pathway enrichment with clusterProfiler <doi:10.1089/omi.2011.0118>, and gene regulatory network (GRN) construction and analysis using igraph'. The package enables a reproducible workflow from raw data processing to biological interpretation.

This package implements the interactive fixed effects ('IFE') panel estimator of Bai (2009) <doi:10.3982/ECTA6135> with analytical standard errors ('homoskedastic', HC1 robust, and cluster-robust by unit). Supports asymptotic bias correction for large panels (Bai 2009) and a dynamic extension for predetermined regressors (Moon and Weidner 2017 <doi:10.1017/S0266466615000328>). Includes information-criterion-based factor number selection (Bai and Ng 2002 <doi:10.1111/1468-0262.00273>). All computations use base R only with no external dependencies.

Institutional performance assessment remains a key challenge to a multitude of stakeholders. Existing indicators such as h-type indicators, g-type indicators, and many others do not reflect expertise of institutions that defines their research portfolio. The package offers functionality to compute and visualise two novel indices: the x-index and the xd-index. The x-index evaluates an institution's scholarly expertise within a specific discipline or field, while the xd-index provides a broader assessment of overall scholarly expertise considering an institution's publication pattern and strengths across coarse thematic areas. These indices offer a nuanced understanding of institutional research capabilities, aiding stakeholders in research management and resource allocation decisions. Lathabai, H.H., Nandy, A., and Singh, V.K. (2021) <doi:10.1007/s11192-021-04188-3>. Nandy, A., Lathabai, H.H., and Singh, V.K. (2023) <doi:10.5281/zenodo.8305585>. This package provides the h-, g-, x-, xd-indices, and their variants for use with standard format of Web of Science (WoS) scrapped datasets.

Given the date column as an ascending entry, future errors are included in the sum of squares of error that should be minimized based on the number of steps and weights you determine. Thus, it is prevented that the variables affect each other's coefficients unrealistically.

Inference procedures accommodate a flexible range of hazard ratio patterns with a two-sample semi-parametric model. This model contains the proportional hazards model and the proportional odds model as sub-models, and accommodates non-proportional hazards situations to the extreme of having crossing hazards and crossing survivor functions. Overall, this package has four major functions: 1) the parameter estimation, namely short-term and long-term hazard ratio parameters; 2) 95 percent and 90 percent point-wise confidence intervals and simultaneous confidence bands for the hazard ratio function; 3) p-value of the adaptive weighted log-rank test; 4) p-values of two lack-of-fit tests for the model. See the included "read_me_first.pdf" for brief instructions. In this version (1.1), there is no need to sort the data before applying this package.

This package provides helper functions to perform Bayesian model averaging using Markov chain Monte Carlo samples from separate models. Calculates weights and obtains draws from the model-averaged posterior for quantities of interest specified by the user. Weight calculations can be done using marginal likelihoods or log-predictive likelihoods as in Ando, T., & Tsay, R. (2010) <doi:10.1016/j.ijforecast.2009.08.001>.

This package provides a fast JSON parser, generator and validator which converts JSON', NDJSON (Newline Delimited JSON') and GeoJSON (Geographic JSON') data to/from R objects. The standard R data types are supported (e.g. logical, numeric, integer) with configurable handling of NULL and NA values. Data frames, atomic vectors and lists are all supported as data containers translated to/from JSON'. GeoJSON data is read in as simple features objects. This implementation wraps the yyjson C library which is available from <https://github.com/ibireme/yyjson>.

This package provides a fast, correct, safe, and ergonomic YAML 1.2 parser and generator written in Rust'. Convert between YAML and simple R objects with full support for multi-document streams, tags, anchors, and aliases. Offers opt-in handlers for custom tag behavior and round-trips common R data structures. Implements the YAML 1.2.2 specification from the YAML Language Development Team (2021) <https://yaml.org/spec/1.2.2/>. Proudly supported by Posit.

This package provides with parametric Risk Neutral Densities (RNDs) and cumulative densities of futures prices on fixed-income products. It relies on options on Short Term Interest Rate futures or options on government bond futures. It models the futures price as a mixture of lognormal densities. It also provides with the RNDs and cumulative densities of the money market rate or the government bond yield inferred from the futures price, using the RND of the futures price. It eventually provides with the probability attached to each bond in the delivery basket of a government bond futures to be the cheapest at maturity, using the RND of the bond futures price. The package leverages on the works of Melick, W. R. and Thomas, C. P. (1997) <doi:10.2307/2331318> and B. Bahra (1998) <doi:10.2139/ssrn.77429>.

Obtain historical and near real time data related to stocks, index and currencies from the Yahoo Finance API. This package is community maintained and is not officially supported by Yahoo'. The accuracy of data is only as correct as provided on <https://finance.yahoo.com/>.

The Author's personal R Package that contains miscellaneous functions. The current version of package contains miscellaneous functions for brain data to compute Asymmetry Index (AI) and bilateral (L+R) measures and reshape the data.

Simple and efficient access to Yahoo Finance's historical data API <https://finance.yahoo.com/> for querying and retrieval of financial data. The core functionality of the yfhist package abstracts the complexities of interacting with Yahoo Finance APIs, such as session management, crumb and cookie handling, query construction, date validation, and interval management. This abstraction allows users to focus on retrieving data rather than managing API details. Use cases include historical data across a range of security types including equities & ETFs, indices, and other tickers. The package supports flexible query capabilities, including customizable date ranges, multiple time intervals, and automatic data validation. It automatically manages interval-specific limitations, such as lookback periods for intraday data and maximum date ranges for minute-level intervals. The implementation leverages standard HTTP libraries to handle API interactions efficiently and provides support for both R and Python to ensure accessibility for a broad audience.

Semiparametric modeling of lifetime data with crossing survival curves via Yang and Prentice model with piecewise exponential baseline distribution. Details about the model can be found in Demarqui and Mayrink (2019) <arXiv:1910.02406>. Model fitting carried out via likelihood-based and Bayesian approaches. The package also provides point and interval estimation for the crossing survival times.

Simulation and Inference for SDEs and Other Stochastic Processes.

The purpose of this package is to provide methods to interpret multiple linear regression and canonical correlation results including beta weights,structure coefficients, validity coefficients, product measures, relative weights, all-possible-subsets regression, dominance analysis, commonality analysis, and adjusted effect sizes.

An alternative canonical correlation/redundancy analysis function, with associated print, plot, and summary methods. A method for generating helio plots is also included.

Simple and efficient access to Yahoo Finance's screener API <https://finance.yahoo.com/research-hub/screener/> for querying and retrieval of financial data. The core functionality abstracts the complexities of interacting with Yahoo Finance APIs, such as session management, crumb and cookie handling, query construction, pagination, and JSON payload generation. This abstraction allows users to focus on filtering and retrieving data rather than managing API details. Use cases include screening across a range of security types including equities, mutual funds, ETFs, indices, and futures. The package supports advanced query capabilities, including logical operators, nested filters, and customizable payloads. It automatically handles pagination to ensure efficient retrieval of large datasets by fetching results in batches of up to 250 entries per request. Filters can be dynamically defined to accommodate a wide range of screening needs. The implementation leverages standard HTTP libraries to handle API interactions efficiently and provides support for both R and Python to ensure accessibility for a broad audience.

Setting layout through YAML headers in R-Markdown documents, enabling their automatic generation. Functions and methods may summarize R objects in automatic reports, for instance check-lists and further reports applied to the packages taxlist and vegtable'.

Dataset from the young elite swimmers study.

The generalized construction methods for magic squares, inspired by the ancient Chinese mathematician Yang Hui's classical work "Xu Gu Zhai Qi Suan Fa". These methods can construct 4n-order magic squares and 2(2n+1)-order magic squares.

This package performs nearest neighbor-based imputation using one or more alternative approaches to processing multivariate data. These include methods based on canonical correlation: analysis, canonical correspondence analysis, and a multivariate adaptation of the random forest classification and regression techniques of Leo Breiman and Adele Cutler. Additional methods are also offered. The package includes functions for comparing the results from running alternative techniques, detecting imputation targets that are notably distant from reference observations, detecting and correcting for bias, bootstrapping and building ensemble imputations, and mapping results.