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Tool for easy and efficient discretization of continuous and categorical data. The package calculates the most optimal binning of a given explanatory variable with respect to a user-specified target variable. The purpose is to assign a unique Weight-of-Evidence value to each of the calculated binpoints in order to recode the original variable. The package allows users to impose certain restrictions on the functional form on the resulting binning while maximizing the overall information value in the original data. The package is well suited for logistic scoring models where input variables may be subject to restrictions such as linearity by e.g. regulatory authorities. An excellent source describing in detail the development of scorecards, and the role of Weight-of-Evidence coding in credit scoring is (Siddiqi 2006, ISBN: 978â 0-471â 75451â 0). The package utilizes the discrete nature of decision trees and Isotonic Regression to accommodate the trade-off between flexible functional forms and maximum information value.
This package provides a robust and reproducible pipeline for extracting, cleaning, and analyzing athlete performance data generated by VALD ForceDecks systems. The package supports batch-oriented data processing for large datasets, standardized data transformation workflows, and visualization utilities for sports science research and performance monitoring. It is designed to facilitate reproducible analysis across multiple sports with comprehensive documentation and error handling.
Add publication-quality custom legends with vertical brackets. Designed for displaying statistical comparisons between groups, commonly used in scientific publications for showing significance levels. Features include adaptive positioning, automatic bracket spacing for overlapping comparisons, font family inheritance, and support for asterisks, p-values, or custom labels. Compatible with ggplot2 graphics.
This package provides a set of wrapper functions for Visa Chart Components'. Visa Chart Components <https://github.com/visa/visa-chart-components> is an accessibility focused, framework agnostic set of data experience design systems components for the web.
Although model selection is ubiquitous in scientific discovery, the stability and uncertainty of the selected model is often hard to evaluate. How to characterize the random behavior of the model selection procedure is the key to understand and quantify the model selection uncertainty. This R package offers several graphical tools to visualize the distribution of the selected model. For example, Gplot(), Hplot(), VDSM_scatterplot() and VDSM_heatmap(). To the best of our knowledge, this is the first attempt to visualize such a distribution. About what distribution of selected model is and how it work please see Qin,Y.and Wang,L. (2021) "Visualization of Model Selection Uncertainty" <https://homepages.uc.edu/~qinyn/VDSM/VDSM.html>.
Offers a wide range of functions for reading and writing data in various file formats, including CSV, RDS, Excel and ZIP files. Additionally, it provides functions for retrieving metadata associated with files, such as file size and creation date, making it easy to manage and organize large data sets. This package is designed to simplify data import and export tasks, and provide users with a comprehensive set of tools to work with different types of data files.
The variable importance is calculated using knock off variables. Then output can be provided in numerical and graphical form. Meredith L Wallace (2023) <doi:10.1186/s12874-023-01965-x>.
The biomarker data set by Vermeulen et al. (2009) <doi:10.1016/S1470-2045(09)70154-8> is provided. The data source, however, is by Ruijter et al. (2013) <doi:10.1016/j.ymeth.2012.08.011>. The original data set may be downloaded from <https://medischebiologie.nl/wp-content/uploads/2019/02/qpcrdatamethods.zip>. This data set is for a real-time quantitative polymerase chain reaction (PCR) experiment that comprises the raw fluorescence data of 24,576 amplification curves. This data set comprises 59 genes of interest and 5 reference genes. Each gene was assessed on 366 neuroblastoma complementary DNA (cDNA) samples and on 18 standard dilution series samples (10-fold 5-point dilution series x 3 replicates + no template controls (NTC) x 3 replicates).
Wrapper around the City of Vancouver Open Data API <https://opendata.vancouver.ca/api/v2/console> to simplify and standardize access to City of Vancouver open data. Functionality to list the data catalogue and access data and geographic records.
Visualize the trends and historical downloads from packages in the CRAN repository. Data is obtained by using the API to query the database from the RStudio CRAN mirror.
To computed the variability independent of mean (VIM) or variation independent of mean (VIM). The methodology can be found at Peter M Rothwell et al. (2010) <doi:10.1016/S1474-4422(10)70067-3>.
This package provides fitting routines for four versions of the Vitality family of mortality models.
This package provides a versatile range of functions, including exploratory data analysis, time-series analysis, organizational network analysis, and data validation, whilst at the same time implements a set of best practices in analyzing and visualizing data specific to Microsoft Viva Insights'.
Calculates voter transitions comparing two elections, using the function solve.QP() in package quadprog'.
The base class VirtualArray is defined, which acts as a wrapper around lists allowing users to fold arbitrary sequential data into n-dimensional, R-style virtual arrays. The derived XArray class is defined to be used for homogeneous lists that contain a single class of objects. The RasterArray and SfArray classes enable the use of stacked spatial data instead of lists.
This package contains functions for a variational Bayesian method for sparse PCA proposed by Ning (2020) <arXiv:2102.00305>. There are two algorithms: the PX-CAVI algorithm (if assuming the loadings matrix is jointly row-sparse) and the batch PX-CAVI algorithm (if without this assumption). The outputs of the main function, VBsparsePCA(), include the mean and covariance of the loadings matrix, the score functions, the variable selection results, and the estimated variance of the random noise.
Graphs the pdf or pmf and highlights what area or probability is present in user defined locations. Visualize is able to provide lower tail, bounded, upper tail, and two tail calculations. Supports strict and equal to inequalities. Also provided on the graph is the mean and variance of the distribution.
In order to make it easy to use variance reduction algorithms for any simulation, this framework can help you. We propose user friendly and easy to extend framework. Antithetic Variates, Inner Control Variates, Outer Control Variates and Importance Sampling algorithms are available in the framework. User can write its own simulation function and use the Variance Reduction techniques in this package to obtain more efficient simulations. An implementation of Asian Option simulation is already available within the package. See Kemal Dinçer Dingeç & Wolfgang Hörmann (2012) <doi:10.1016/j.ejor.2012.03.046>.
This package implements the Vine Copula Change Point (VCCP) methodology for the estimation of the number and location of multiple change points in the vine copula structure of multivariate time series. The method uses vine copulas, various state-of-the-art segmentation methods to identify multiple change points, and a likelihood ratio test or the stationary bootstrap for inference. The vine copulas allow for various forms of dependence between time series including tail, symmetric and asymmetric dependence. The functions have been extensively tested on simulated multivariate time series data and fMRI data. For details on the VCCP methodology, please see Xiong & Cribben (2021).
Enables computationally efficient parameters-estimation by variational Bayesian methods for various diagnostic classification models (DCMs). DCMs are a class of discrete latent variable models for classifying respondents into latent classes that typically represent distinct combinations of skills they possess. Recently, to meet the growing need of large-scale diagnostic measurement in the field of educational, psychological, and psychiatric measurements, variational Bayesian inference has been developed as a computationally efficient alternative to the Markov chain Monte Carlo methods, e.g., Yamaguchi and Okada (2020a) <doi:10.1007/s11336-020-09739-w>, Yamaguchi and Okada (2020b) <doi:10.3102/1076998620911934>, Yamaguchi (2020) <doi:10.1007/s41237-020-00104-w>, Oka and Okada (2023) <doi:10.1007/s11336-022-09884-4>, and Yamaguchi and Martinez (2023) <doi:10.1111/bmsp.12308>. To facilitate their applications, variationalDCM is developed to provide a collection of recently-proposed variational Bayesian estimation methods for various DCMs.
Describe in words the genealogical relationship between two members of a given pedigree, using the algorithm in Vigeland (2022) <doi:10.1186/s12859-022-04759-y>. verbalisr is part of the pedsuite collection of packages for pedigree analysis. For a demonstration of verbalisr', see the online app QuickPed at <https://magnusdv.shinyapps.io/quickped>.
An implementation of the Verhoeff algorithm for calculating check digits (Verhoeff, J. (1969) <doi:10.1002/zamm.19710510323>). Functions are provided to calculate a check digit given an input number, calculate and append a check digit to an input number, and validate that a check digit is correct given an input number.
This package provides methods to transform omop_result objects into formatted tables and figures, facilitating the visualisation of study results working with the Observational Medical Outcomes Partnership (OMOP) Common Data Model.
Various methods to count ballots in voting systems are provided. Functions to check validity of ballots are also provided to ensure flexibility.