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This package provides a robust and reproducible pipeline for extracting, cleaning, and analyzing athlete performance data generated by VALD ForceDecks systems. The package supports batch-oriented data processing for large datasets, standardized data transformation workflows, and visualization utilities for sports science research and performance monitoring. It is designed to facilitate reproducible analysis across multiple sports with comprehensive documentation and error handling.
Rule sets with validation rules may contain redundancies or contradictions. Functions for finding redundancies and problematic rules are provided, given a set a rules formulated with validate'.
Vega and Vega-Lite parse text in JSON notation to render chart-specifications into HTML'. This package is used to facilitate the rendering. It also provides a means to interact with signals, events, and datasets in a Vega chart using JavaScript or Shiny'.
Create adjacency matrices of vocalisation graphs from dataframes containing sequences of speech and silence intervals, transforming these matrices into Markov diagrams, and generating datasets for classification of these diagrams by flattening them and adding global properties (functionals) etc. Vocalisation diagrams date back to early work in psychiatry (Jaffe and Feldstein, 1970) and social psychology (Dabbs and Ruback, 1987) but have only recently been employed as a data representation method for machine learning tasks including meeting segmentation (Luz, 2012) <doi:10.1145/2328967.2328970> and classification (Luz, 2013) <doi:10.1145/2522848.2533788>.
This package contains functions for visualization univariate data: ccdplot and qddplot.
Fits generalized additive models (GAMs) using a variational approximations (VA) framework. In brief, the VA framework provides a fully or at least closed to fully tractable lower bound approximation to the marginal likelihood of a GAM when it is parameterized as a mixed model (using penalized splines, say). In doing so, the VA framework aims offers both the stability and natural inference tools available in the mixed model approach to GAMs, while achieving computation times comparable to that of using the penalized likelihood approach to GAMs. See Hui et al. (2018) <doi:10.1080/01621459.2018.1518235>.
R functions are not supposed to print text without giving the user the option to turn the printing off or on using a Boolean verbose in a construct like if(verbose) print(...)'. But this black/white approach is rather rigid, and an approach with shades of gray might be more appropriate in many circumstances.
Generation of domain variables, linearization of several non-linear population statistics (the ratio of two totals, weighted income percentile, relative median income ratio, at-risk-of-poverty rate, at-risk-of-poverty threshold, Gini coefficient, gender pay gap, the aggregate replacement ratio, the relative median income ratio, median income below at-risk-of-poverty gap, income quintile share ratio, relative median at-risk-of-poverty gap), computation of regression residuals in case of weight calibration, variance estimation of sample surveys by the ultimate cluster method (Hansen, Hurwitz and Madow, Sample Survey Methods And Theory, vol. I: Methods and Applications; vol. II: Theory. 1953, New York: John Wiley and Sons), variance estimation for longitudinal, cross-sectional measures and measures of change for single and multistage stage cluster sampling designs (Berger, Y. G., 2015, <doi:10.1111/rssa.12116>). Several other precision measures are derived - standard error, the coefficient of variation, the margin of error, confidence interval, design effect.
This package provides a set of wrapper functions for Visa Chart Components'. Visa Chart Components <https://github.com/visa/visa-chart-components> is an accessibility focused, framework agnostic set of data experience design systems components for the web.
This package provides an easy to calculate local variable importance measure based on Ceteris Paribus profile and global variable importance measure based on Partial Dependence Profiles.
This package provides a convenient interface for constructing plots to visualize the fit of regression models arising from a wide variety of models in R ('lm', glm', coxph', rlm', gam', locfit', lmer', randomForest', etc.).
Implementation of shiny app to visualize adverse events based on the Common Terminology Criteria for Adverse Events (CTCAE) using stacked correspondence analysis as described in Diniz et. al (2021)<doi:10.1186/s12874-021-01368-w>.
Tool for easy and efficient discretization of continuous and categorical data. The package calculates the most optimal binning of a given explanatory variable with respect to a user-specified target variable. The purpose is to assign a unique Weight-of-Evidence value to each of the calculated binpoints in order to recode the original variable. The package allows users to impose certain restrictions on the functional form on the resulting binning while maximizing the overall information value in the original data. The package is well suited for logistic scoring models where input variables may be subject to restrictions such as linearity by e.g. regulatory authorities. An excellent source describing in detail the development of scorecards, and the role of Weight-of-Evidence coding in credit scoring is (Siddiqi 2006, ISBN: 978â 0-471â 75451â 0). The package utilizes the discrete nature of decision trees and Isotonic Regression to accommodate the trade-off between flexible functional forms and maximum information value.
Debugging pipe chains often consists of viewing the output after each step. This package adds RStudio addins and two functions that allow outputing each or select steps in a convenient way.
The Bank of Canada updated their Valet API <https://www.bankofcanada.ca/valet/docs>, and no R client currently exists. This provides access to all of Valet's endpoints and serves responses in wide format easy for researchers to handle but also provides tools to access API responses as a list.
Procedures for the manipulation, normalization, and plotting of phonetic and sociophonetic vowel formant data. vowels is the backend for the NORM website.
Data version management on the file system for smaller projects. Manage data pipeline outputs with symbolic folder links, structured logging and reports, using R6 classes for encapsulation and data.table for speed. Directory-specific logs used as source of truth to allow portability of versioned data folders.
Perform the analysis of the World Health Organization (WHO) Pharmacovigilance database VigiBase (Extract Case Level version), <https://who-umc.org/> e.g., load data, perform data management, disproportionality analysis, and descriptive statistics. Intended for pharmacovigilance routine use or studies. This package is NOT supported nor reflect the opinion of the WHO, or the Uppsala Monitoring Centre. Disproportionality methods are described by Norén et al (2013) <doi:10.1177/0962280211403604>.
Estimates and plots as a heat map the correlation coefficients obtained via the wavelet local multiple correlation WLMC (Fernández-Macho 2018) and the dominant variable/s, i.e., the variable/s that maximizes the multiple correlation through time and scale (Polanco-Martà nez et al. 2020, Polanco-Martà nez 2022). We improve the graphical outputs of WLMC proposing a didactic and useful way to visualize the dominant variable(s) for a set of time series. The WLMC was designed for financial time series, but other kinds of data (e.g., climatic, ecological, etc.) can be used. The functions contained in VisualDom are highly flexible since these contains several parameters to personalize the time series under analysis and the heat maps. In addition, we have also included two data sets (named rdata_climate and rdata_Lorenz') to exemplify the use of the functions contained in VisualDom'. Methods derived from Fernández-Macho (2018) <doi:10.1016/j.physa.2017.11.050>, Polanco-Martà nez et al. (2020) <doi:10.1038/s41598-020-77767-8> and Polanco-Martà nez (2023, in press).
Non-Domestic VAERS vaccine data for 01/01/2016 - 06/14/2016. If you want to explore the full VAERS data for 1990 - Present (data, symptoms, and vaccines), then check out the vaersND package from the URL below. The URL and BugReports below correspond to the vaersND package, of which vaersNDvax is a small subset (2016 only). vaersND is not hosted on CRAN due to the large size of the data set. To install the Suggested vaers and vaersND packages, use the following R code: devtools::install_git("https://gitlab.com/iembry/vaers.git", build_vignettes = TRUE) and devtools::install_git("https://gitlab.com/iembry/vaersND.git", build_vignettes = TRUE)'. "VAERS is a national vaccine safety surveillance program co-sponsored by the US Centers for Disease Control and Prevention (CDC) and the US Food and Drug Administration (FDA). VAERS is a post-marketing safety surveillance program, collecting information about adverse events (possible side effects) that occur after the administration of vaccines licensed for use in the United States." For more information about the data, visit <https://vaers.hhs.gov/index>. For information about vaccination/immunization hazards, visit <http://www.questionuniverse.com/rethink.html/#vaccine>.
US VAERS vaccine data for 01/01/2018 - 06/14/2018. If you want to explore the full VAERS data for 1990 - Present (data, symptoms, and vaccines), then check out the vaers package from the URL below. The URL and BugReports below correspond to the vaers package, of which vaersvax is a small subset (2018 only). vaers is not hosted on CRAN due to the large size of the data set. To install the Suggested vaers and vaersND packages, use the following R code: devtools::install_git("<https://gitlab.com/iembry/vaers.git>", build_vignettes = TRUE) and devtools::install_git("<https://gitlab.com/iembry/vaersND.git>", build_vignettes = TRUE)'. "The Vaccine Adverse Event Reporting System (VAERS) is a national early warning system to detect possible safety problems in U.S.-licensed vaccines. VAERS is co-managed by the Centers for Disease Control and Prevention (CDC) and the U.S. Food and Drug Administration (FDA)." For more information about the data, visit <https://vaers.hhs.gov/>. For information about vaccination/immunization hazards, visit <http://www.questionuniverse.com/rethink.html#vaccine>.
Via Foundry API provides streamlined tools for interacting with and extracting data from structured responses, particularly for use cases involving hierarchical data from Foundry's API. It includes functions to fetch and parse process-level and file-level metadata, allowing users to efficiently query and manipulate nested data structures. Key features include the ability to list all unique process names, retrieve file metadata for specific or all processes, and dynamically load or download files based on their type. With built-in support for handling various file formats (e.g., tabular and non-tabular files) and seamless integration with API through authentication, this package is designed to enhance workflows involving large-scale data management and analysis. Robust error handling and flexible configuration ensure reliable performance across diverse data environments. Please consult the documentation for the API endpoint for your installation.
Variance function estimation for models proposed by W. Sadler in his variance function program ('VFP', www.aacb.asn.au/AACB/Resources/Variance-Function-Program). Here, the idea is to fit multiple variance functions to a data set and consequently assess which function reflects the relationship Var ~ Mean best. For in-vitro diagnostic ('IVD') assays modeling this relationship is of great importance when individual test-results are used for defining follow-up treatment of patients.
Functions, Classes & Methods for estimation, prediction, and simulation (bootstrap) of Variable Length Markov Chain ('VLMC') Models.