_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-pd-genomewidesnp-5 3.14.1
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.genomewidesnp.5
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for Affymetrix GenomeWideSNP_5
Description:

Platform Design Info for Affymetrix GenomeWideSNP_5.

r-pd-moex-1-0-st-v1 3.14.1
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.moex.1.0.st.v1
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for Affymetrix MoEx-1_0-st-v1
Description:

Platform Design Info for Affymetrix MoEx-1_0-st-v1.

r-pickgene 1.82.0
Propagated dependencies: r-mass@7.3-65
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: http://www.stat.wisc.edu/~yandell/statgen
Licenses: GPL 2+
Build system: r
Synopsis: Adaptive Gene Picking for Microarray Expression Data Analysis
Description:

This package provides functions to Analyze Microarray (Gene Expression) Data.

r-pd-clariom-s-rat 3.14.1
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.clariom.s.rat
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for Affymetrix Clariom_S_Rat
Description:

Platform Design Info for Affymetrix Clariom_S_Rat.

r-pd-chogene-2-1-st 3.12.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.chogene.2.1.st
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for Affymetrix CHOGene-2_1-st
Description:

Platform Design Info for Affymetrix CHOGene-2_1-st.

r-pathifier 1.48.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pathifier
Licenses: FSDG-compatible
Build system: r
Synopsis: Quantify deregulation of pathways in cancer
Description:

Pathifier is an algorithm that infers pathway deregulation scores for each tumor sample on the basis of expression data. This score is determined, in a context-specific manner, for every particular dataset and type of cancer that is being investigated. The algorithm transforms gene-level information into pathway-level information, generating a compact and biologically relevant representation of each sample.

r-pd-mu11ksuba 3.12.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.mu11ksuba
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for The Manufacturer's Name Mu11KsubA
Description:

Platform Design Info for The Manufacturer's Name Mu11KsubA.

r-pd-hg-u133a-tag 3.12.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.hg.u133a.tag
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for The Manufacturer's Name HG-U133A_tag
Description:

Platform Design Info for The Manufacturer's Name HG-U133A_tag.

r-phyloprofile 2.2.3
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://github.com/BIONF/PhyloProfile/
Licenses: Expat
Build system: r
Synopsis: PhyloProfile
Description:

PhyloProfile is a tool for exploring complex phylogenetic profiles. Phylogenetic profiles, presence/absence patterns of genes over a set of species, are commonly used to trace the functional and evolutionary history of genes across species and time. With PhyloProfile we can enrich regular phylogenetic profiles with further data like sequence/structure similarity, to make phylogenetic profiling more meaningful. Besides the interactive visualisation powered by R-Shiny, the package offers a set of further analysis features to gain insights like the gene age estimation or core gene identification.

r-pd-hg-u95e 3.12.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.hg.u95e
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for The Manufacturer's Name HG_U95E
Description:

Platform Design Info for The Manufacturer's Name HG_U95E.

r-pd-clariom-s-human-ht 3.14.1
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.clariom.s.human.ht
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for Affymetrix Clariom_S_Human_HT
Description:

Platform Design Info for Affymetrix Clariom_S_Human_HT.

r-path2ppi 1.40.0
Propagated dependencies: r-igraph@2.2.1
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: http://www.bioinformatik.uni-frankfurt.de/
Licenses: GPL 2+
Build system: r
Synopsis: Prediction of pathway-related protein-protein interaction networks
Description:

Package to predict protein-protein interaction (PPI) networks in target organisms for which only a view information about PPIs is available. Path2PPI predicts PPI networks based on sets of proteins which can belong to a certain pathway from well-established model organisms. It helps to combine and transfer information of a certain pathway or biological process from several reference organisms to one target organism. Path2PPI only depends on the sequence similarity of the involved proteins.

r-panomir 1.14.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://github.com/pouryany/PanomiR
Licenses: Expat
Build system: r
Synopsis: Detection of miRNAs that regulate interacting groups of pathways
Description:

PanomiR is a package to detect miRNAs that target groups of pathways from gene expression data. This package provides functionality for generating pathway activity profiles, determining differentially activated pathways between user-specified conditions, determining clusters of pathways via the PCxN package, and generating miRNAs targeting clusters of pathways. These function can be used separately or sequentially to analyze RNA-Seq data.

r-pepsnmrdata 1.28.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/PepsNMRData
Licenses: GPL 2 FSDG-compatible
Build system: r
Synopsis: Datasets for the PepsNMR package
Description:

This package contains all the datasets used in the PepsNMR package.

r-pd-pae-g1a 3.12.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.pae.g1a
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for The Manufacturer's Name Pae_G1a
Description:

Platform Design Info for The Manufacturer's Name Pae_G1a.

r-phantasuslite 1.8.0
Propagated dependencies: r-stringr@1.6.0 r-rhdf5client@1.32.0 r-httr@1.4.7 r-data-table@1.17.8 r-biobase@2.70.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://github.com/ctlab/phantasusLite/
Licenses: Expat
Build system: r
Synopsis: Loading and annotation RNA-seq counts matrices
Description:

PhantasusLite – a lightweight package with helper functions of general interest extracted from phantasus package. In parituclar it simplifies working with public RNA-seq datasets from GEO by providing access to the remote HSDS repository with the precomputed gene counts from ARCHS4 and DEE2 projects.

r-phastcons35way-ucsc-mm39 3.16.0
Propagated dependencies: r-genomicscores@2.22.0 r-annotationhub@4.0.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/phastCons35way.UCSC.mm39
Licenses: Artistic License 2.0
Build system: r
Synopsis: UCSC phastCons mm39 conservation scores AnnotationHub Resource Metadata
Description:

Store UCSC phastCons mm39 conservation scores AnnotationHub Resource Metadata. Provide provenance and citation information for UCSC phastCons mm39 conservation score AnnotationHub resources. Illustrate in a vignette how to access those resources.

r-pd-ht-hg-u133-plus-pm 3.12.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.ht.hg.u133.plus.pm
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for The Manufacturer's Name HT_HG-U133_Plus_PM
Description:

Platform Design Info for The Manufacturer's Name HT_HG-U133_Plus_PM.

r-prince 1.26.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/PrInCE
Licenses: FSDG-compatible
Build system: r
Synopsis: Predicting Interactomes from Co-Elution
Description:

PrInCE (Predicting Interactomes from Co-Elution) uses a naive Bayes classifier trained on dataset-derived features to recover protein-protein interactions from co-elution chromatogram profiles. This package contains the R implementation of PrInCE.

r-pd-clariom-s-mouse-ht 3.14.1
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.clariom.s.mouse.ht
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for Affymetrix Clariom_S_Mouse_HT
Description:

Platform Design Info for Affymetrix Clariom_S_Mouse_HT.

r-pipecomp 1.20.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://doi.org/10.1186/s13059-020-02136-7
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: pipeComp pipeline benchmarking framework
Description:

This package provides a simple framework to facilitate the comparison of pipelines involving various steps and parameters. The `pipelineDefinition` class represents pipelines as, minimally, a set of functions consecutively executed on the output of the previous one, and optionally accompanied by step-wise evaluation and aggregation functions. Given such an object, a set of alternative parameters/methods, and benchmark datasets, the `runPipeline` function then proceeds through all combinations arguments, avoiding recomputing the same step twice and compiling evaluations on the fly to avoid storing potentially large intermediate data.

r-pd-mirna-1-0 3.12.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.mirna.1.0
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for The Manufacturer's Name miRNA-1_0
Description:

Platform Design Info for The Manufacturer's Name miRNA-1_0.

r-pd-soybean 3.12.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.soybean
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for The Manufacturer's Name Soybean
Description:

Platform Design Info for The Manufacturer's Name Soybean.

r-pd-ht-hg-u133a 3.12.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.ht.hg.u133a
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for The Manufacturer's Name HT_HG-U133A
Description:

Platform Design Info for The Manufacturer's Name HT_HG-U133A.

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Total results: 69112