_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-rvenn 1.1.0
Propagated dependencies: r-ggforce@0.5.0 r-ggplot2@4.0.1 r-magrittr@2.0.4 r-pheatmap@1.0.13 r-purrr@1.2.0 r-rlang@1.1.6 r-vegan@2.7-2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=RVenn
Licenses: GPL 3
Build system: r
Synopsis: Set operations for many sets
Description:

The base functions for set operations in R can be used for only two sets. This package RVenn provides functions for dealing with multiple sets. It uses purr to find the union, intersection and difference of three or more sets. This package also provides functions for pairwise set operations among several sets. Further, based on ggplot2 and ggforce, a Venn diagram can be drawn for two or three sets. For bigger data sets, a clustered heatmap showing the presence or absence of the elements of the sets can be drawn based on the pheatmap package. Finally, enrichment test can be applied to two sets whether an overlap is statistically significant or not.

r-geojsonr 1.1.2
Propagated dependencies: r-r6@2.6.1 r-rcpp@1.1.0 r-rcpparmadillo@15.2.2-1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/mlampros/geojsonR
Licenses: Expat
Build system: r
Synopsis: GeoJson processing toolkit
Description:

This package includes functions for processing GeoJson objects relying on RFC 7946. The geojson encoding is based on json11, a tiny JSON library for C++11. Furthermore, the source code is exported in R through the Rcpp and RcppArmadillo packages.

r-glmnet 4.1-10
Propagated dependencies: r-foreach@1.5.2 r-matrix@1.7-4 r-rcpp@1.1.0 r-rcppeigen@0.3.4.0.2 r-shape@1.4.6.1 r-survival@3.8-3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://www.jstatsoft.org/article/view/v033i01
Licenses: GPL 2+
Build system: r
Synopsis: Lasso and elastic-net regularized generalized linear models
Description:

The glmnet package provides efficient procedures for fitting the entire lasso or elastic-net regularization path for linear and Poisson regression, as well as logistic, multinomial, Cox, multiple-response Gaussian and grouped multinomial models. The algorithm uses cyclical coordinate descent in a path-wise fashion.

r-bb 2019.10-1
Propagated dependencies: r-quadprog@1.5-8
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://publichealth.jhu.edu/
Licenses: GPL 3
Build system: r
Synopsis: Solving and optimizing large-scale nonlinear systems
Description:

This package implements Barzilai-Borwein spectral methods for solving nonlinear system of equations, and for optimizing nonlinear objective functions subject to simple constraints.

r-assertive-base 0.0-9
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://bitbucket.org/richierocks/assertive.base
Licenses: GPL 3+
Build system: r
Synopsis: Core of the assertive package
Description:

This package provides a minimal set of predicates and assertions used by the assertive package. This is mainly for use by other package developers who want to include run-time testing features in their own packages.

r-fbasics 4041.97
Propagated dependencies: r-gss@2.2-10 r-mass@7.3-65 r-spatial@7.3-18 r-stabledist@0.7-2 r-timedate@4051.111 r-timeseries@4041.111
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://r-forge.r-project.org/scm/viewvc.php/pkg/fBasics/?root=rmetrics
Licenses: GPL 2+
Build system: r
Synopsis: Metrics for markets and basic statistics
Description:

This package provides a collection of functions to explore and to investigate basic properties of financial returns and related quantities. The covered fields include techniques of explorative data analysis and the investigation of distributional properties, including parameter estimation and hypothesis testing. Even more, there are several utility functions for data handling and management.

r-vcd 1.4-13
Propagated dependencies: r-colorspace@2.1-2 r-lmtest@0.9-40 r-mass@7.3-65
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/vcd/
Licenses: GPL 2
Build system: r
Synopsis: Visualizing categorical data
Description:

This package provides visualization techniques, data sets, summary and inference procedures aimed particularly at categorical data. Special emphasis is given to highly extensible grid graphics. The package was originally inspired by the book "Visualizing Categorical Data" by Michael Friendly and is now the main support package for a new book, "Discrete Data Analysis with R" by Michael Friendly and David Meyer (2015).

r-repmis 0.5.1
Propagated dependencies: r-data-table@1.17.8 r-digest@0.6.39 r-httr@1.4.7 r-plyr@1.8.9 r-r-cache@0.17.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=repmis
Licenses: GPL 3+
Build system: r
Synopsis: Miscellaneous tools for reproducible research
Description:

This package is a collection of tools to load R packages and automatically generate BibTeX files citing them as well as load and cache plain-text and Excel formatted data stored on GitHub, and from other sources.

r-nonnest2 0.5-8
Propagated dependencies: r-compquadform@1.4.4 r-lavaan@0.6-20 r-mvtnorm@1.3-3 r-sandwich@3.1-1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/nonnest2/
Licenses: GPL 2 GPL 3
Build system: r
Synopsis: Tests of non-nested models
Description:

This package allows for testing of non-nested models. It includes tests of model distinguishability and of model fit that can be applied to both nested and non-nested models. The package also includes functionality to obtain confidence intervals associated with AIC and BIC.

r-cccd 1.6
Propagated dependencies: r-deldir@2.0-4 r-fnn@1.1.4.1 r-igraph@2.2.1 r-proxy@0.4-27
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=cccd
Licenses: GPL 2+
Build system: r
Synopsis: Class cover catch digraphs
Description:

This package provides tools to create Class Cover Catch Digraphs, neighborhood graphs, and relatives.

r-penalized 0.9-53
Propagated dependencies: r-rcpp@1.1.0 r-rcpparmadillo@15.2.2-1 r-survival@3.8-3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/penalized/
Licenses: GPL 2+
Build system: r
Synopsis: Penalized estimation in GLMs and in the Cox model
Description:

This package provides tools for fitting possibly high dimensional penalized regression models. The penalty structure can be any combination of an L1 penalty (lasso and fused lasso), an L2 penalty (ridge) and a positivity constraint on the regression coefficients. The supported regression models are linear, logistic and Poisson regression and the Cox Proportional Hazards model. Cross-validation routines allow optimization of the tuning parameters.

r-truncdist 1.0-2
Propagated dependencies: r-evd@2.3-7.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=truncdist
Licenses: GPL 2+
Build system: r
Synopsis: Truncated random variables
Description:

This package provides a collection of tools to evaluate probability density functions, cumulative distribution functions, quantile functions and random numbers for truncated random variables. These functions are provided to also compute the expected value and variance. Q-Q plots can be produced. All the probability functions in the stats, stats4 and evd packages are automatically available for truncation.

r-lsei 1.3-0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://www.stat.auckland.ac.nz/~yongwang
Licenses: GPL 2+
Build system: r
Synopsis: Solve regression problems under equality/inequality constraints
Description:

It contains functions that solve least squares linear regression problems under linear equality/inequality constraints. Functions for solving quadratic programming problems are also available, which transform such problems into least squares ones first.

r-mpm 1.0-23
Propagated dependencies: r-kernsmooth@2.23-26 r-mass@7.3-65
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://mpm.r-forge.r-project.org
Licenses: GPL 2+
Build system: r
Synopsis: Multivariate projection methods
Description:

This is a package for exploratory graphical analysis of multivariate data, specifically gene expression data with different projection methods: principal component analysis, correspondence analysis, spectral map analysis.

r-ecp 3.1.6
Propagated dependencies: r-rcpp@1.1.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/ecp/
Licenses: GPL 2+
Build system: r
Synopsis: Multiple change-point analysis of multivariate data
Description:

This package implements various procedures for finding multiple change-points. Two methods make use of dynamic programming and pruning, with no distributional assumptions other than the existence of certain absolute moments in one method. Hierarchical and exact search methods are included. All methods return the set of estimated change-points as well as other summary information.

r-compquadform 1.4.4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/CompQuadForm
Licenses: GPL 2+
Build system: r
Synopsis: Distribution function of quadratic forms in normal variables
Description:

This package provides functions to compute the distribution function of quadratic forms in normal variables using Imhof's method, Davies's algorithm, Farebrother's algorithm or Liu et al.'s algorithm.

r-pagoda2 1.0.13
Propagated dependencies: r-dendsort@0.3.4 r-drat@0.2.5 r-fastcluster@1.3.0 r-igraph@2.2.1 r-irlba@2.3.5.1 r-magrittr@2.0.4 r-mass@7.3-65 r-matrix@1.7-4 r-mgcv@1.9-4 r-n2r@1.0.3 r-plyr@1.8.9 r-r-utils@2.13.0 r-r6@2.6.1 r-rcpp@1.1.0 r-rcpparmadillo@15.2.2-1 r-rcppeigen@0.3.4.0.2 r-rcppprogress@0.4.2 r-rjson@0.2.23 r-rlang@1.1.6 r-rmtstat@0.3.1 r-rook@1.2 r-rtsne@0.17 r-sccore@1.0.6 r-urltools@1.7.3.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/kharchenkolab/pagoda2
Licenses: GPL 3
Build system: r
Synopsis: Single cell analysis and differential expression
Description:

The package offers functions for analyzing and interactively exploring large-scale single-cell RNA-seq datasets. Pagoda2 primarily performs normalization and differential gene expression analysis, with an interactive application for exploring single-cell RNA-seq datasets. It performs basic tasks such as cell size normalization, gene variance normalization, and can be used to identify subpopulations and run differential expression within individual samples. pagoda2 was written to rapidly process modern large-scale scRNAseq datasets of approximately 1e6 cells. The companion web application allows users to explore which gene expression patterns form the different subpopulations within your data. The package also serves as the primary method for preprocessing data for conos.

r-protolite 2.3.1
Dependencies: protobuf@3.21.9
Propagated dependencies: r-jsonlite@2.0.0 r-rcpp@1.1.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/jeroen/protolite
Licenses: Expat
Build system: r
Synopsis: Highly optimized protocol buffer serializers
Description:

This package provides pure C++ implementations for reading and writing several common data formats based on Google protocol-buffers. It currently supports rexp.proto for serialized R objects, geobuf.proto for binary geojson, and mvt.proto for vector tiles. This package uses the auto-generated C++ code by protobuf-compiler, hence the entire serialization is optimized at compile time. The RProtoBuf package on the other hand uses the protobuf runtime library to provide a general-purpose toolkit for reading and writing arbitrary protocol-buffer data in R.

r-extradistr 1.10.0
Propagated dependencies: r-rcpp@1.1.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/twolodzko/extraDistr
Licenses: GPL 2
Build system: r
Synopsis: Additional univariate and multivariate distributions
Description:

This package implements density, distribution functions, quantile functions and random generation functions for a large number of univariate and multivariate distributions.

r-pbmcapply 1.5.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/kvnkuang/pbmcapply
Licenses: Expat
Build system: r
Synopsis: Track the progress of apply procedures with a progress bar
Description:

This light-weight package helps you track and visualize the progress of parallel versions of vectorized R functions of the mc*apply family.

r-wrs2 1.1-7
Propagated dependencies: r-mass@7.3-65 r-plyr@1.8.9 r-reshape@0.8.10
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://r-forge.r-project.org/projects/psychor/
Licenses: GPL 3
Build system: r
Synopsis: Collection of robust statistical methods
Description:

R-wrs2 offers a range of strong stats methods from Wilcox WRS functions. It implements robust t-tests, both independent and dependent, robust ANOVA, including designs with between-within subjects, quantile ANOVA, robust correlation, robust mediation, and nonparametric ANCOVA models using robust location measures.

r-rspectra 0.16-2
Propagated dependencies: r-matrix@1.7-4 r-rcpp@1.1.0 r-rcppeigen@0.3.4.0.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/yixuan/RSpectra
Licenses: MPL 2.0
Build system: r
Synopsis: Solvers for large-scale Eigenvalue and SVD problems
Description:

This package provides an R interface to the Spectra library for large-scale eigenvalue and SVD problems. It is typically used to compute a few eigenvalues/vectors of an n by n matrix, e.g., the k largest eigenvalues, which is usually more efficient than eigen() if k << n.

r-tzdb 0.5.0
Propagated dependencies: r-cpp11@0.5.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/r-lib/tzdb
Licenses: Expat
Build system: r
Synopsis: Time Zone Database Information
Description:

This package provides an up-to-date copy of the Internet Assigned Numbers Authority (IANA) Time Zone Database. It is updated periodically to reflect changes made by political bodies to time zone boundaries, UTC offsets, and daylight saving time rules. Additionally, this package provides a C++ interface for working with the date library. date provides comprehensive support for working with dates and date-times, which this package exposes to make it easier for other R packages to utilize. Headers are provided for calendar specific calculations, along with a limited interface for time zone manipulations.

r-linprog 0.9-4
Propagated dependencies: r-lpsolve@5.6.23
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://linprog.r-forge.r-project.org/
Licenses: GPL 2+
Build system: r
Synopsis: Linear programming and optimization
Description:

This package can be used to solve Linear Programming / Linear Optimization problems by using the simplex algorithm.

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Total results: 68658