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Warpfns is a set of functions within the FSL (FMRIB Software Library) used for handling and applying spatial transformations (warps) to MRI images.
Tool within FSL for identifying and analyzing clusters in neuroimaging data, particularly useful for statistical thresholding and inference.
Eddy is a tool within FSL that corrects for eddy current distortions and head movements in diffusion MRI data.
A newmat-like wrapper around the Armadillo linear algebra library.
A library that encapsulates the reference implementation of the NIfTI format as well as the legacy code necessary to perform I/O operations on NIfTI files.
Basisfield is a tool within the FSL (FMRIB Software Library) used to model and correct B0 field inhomogeneities in MRI images, which can cause geometric distortions. It is essential for improving image quality and precision in both clinical and research applications.
The meshclass module in FSL provides the Mesh class for representing and manipulating 3D models made of triangles, supporting various geometric operations and querie
The bet2 module in FSL is a brain extraction tool that removes non-brain tissue from MRI images, aiding in isolating the brain for further analysis.
Library within FSL for creating and analyzing shape models of brain structures, aiding in morphometric studies and neuroimaging research.
Tool within FSL designed for fieldmap-based correction of geometric distortions in EPI images, crucial for accurate fMRI analysis.
This package is a build dependency of all FSL modules.
Tool within FSL for automated segmentation of subcortical brain structures from MRI images, aiding neuroscience research.
Topup is a tool within FSL that corrects for susceptibility-induced distortions in echo planar imaging (EPI) data.
cudabasisfield is a FSL module providing helper functions for CUDA operations, facilitating GPU acceleration in FSL tools.
Library or collection of resources supporting FIRST, FSL's tool for automated segmentation of subcortical brain structures, enhancing its functionality and accuracy.
Module within FSL that provides advanced functionalities for FEAT (FMRI Expert Analysis Tool), including pre-processing steps, model setup, and statistical analysis for fMRI data.
Module within FSL that provides advanced functionalities for noise reduction in MRI data using nonlinear filtering techniques.
This library is likely a component of FSL dedicated to the analysis and visualization of cortical surface data in neuroimaging studies.
Collection of miscellaneous C functions and utilities within FSL, providing various helper functions for neuroimaging analysis.
Tool within FSL for FMRIB's Local Analysis of Mixed Effects, used for higher-level analysis of fMRI data, providing robust statistical modeling.
MCFLIRT (Motion Correction using FMRIB's Linear Image Registration Tool) is a tool within FSL designed to perform motion correction on fMRI data.
Eddy is a tool within FSL that corrects for eddy current distortions and head movements in diffusion MRI data.
FLIRT (FMRIB's Linear Image Registration Tool) is a fully automated robust and accurate tool for linear (affine) intra- and inter-modal brain image registration.
Tool within FSL for FMRIB's Improved Linear Model, used for statistical analysis of fMRI data, enhancing accuracy and reliability.