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Most universities use specific color combinations to express their unique brand identity. The unicol package provides the colors and color palettes of various universities for easy plotting and printing in R. We collect and provide a diverse range of color palettes for creating scientific visualizations.
Calculates a Mahalanobis distance for every row of a set of outcome variables (Mahalanobis, 1936 <doi:10.1007/s13171-019-00164-5>). The conditional Mahalanobis distance is calculated using a conditional covariance matrix (i.e., a covariance matrix of the outcome variables after controlling for a set of predictors). Plotting the output of the cond_maha() function can help identify which elements of a profile are unusual after controlling for the predictors.
Universally unique identifiers ('UUIDs') can be sub-optimal for many uses-cases because they are not the most character efficient way of encoding 128 bits of randomness; v1/v2 versions are impractical in many environments, as they require access to a unique, stable MAC address; v3/v5 versions require a unique seed and produce randomly distributed IDs, which can cause fragmentation in many data structures; v4 provides no other information than randomness which can cause fragmentation in many data structures. Providing an alternative, ULIDs (<https://github.com/ulid/spec>) have 128-bit compatibility with UUID', 1.21e+24 unique ULIDs per millisecond, support standard (text) sorting, canonically encoded as a 26 character string, as opposed to the 36 character UUID', use base32 encoding for better efficiency and readability (5 bits per character), are case insensitive, have no special characters (i.e. are URL safe) and have a monotonic sort order (correctly detects and handles the same millisecond).
This package creates interactive UpSet-style visualizations for exploring intersections among multiple sets, following the layout of Lex et al. (2014) <doi:10.1109/TVCG.2014.2346248>. plotly widgets combine set-size bars, intersection-size bars, and membership matrices, and can synchronize complete intersection details with an HTML element for copying in Quarto', R Markdown', and Shiny documents.
This package implements Minimum Torsion for portfolio diversification as described in Meucci, Attilio (2013) <doi:10.2139/ssrn.2276632>.
Parses HTTP user agent strings and returns user agent, device and OS information. This is a â V8â -backed package that uses the UA, device and OS definitions from the â ua-parserâ project <https://github.com/ua-parser>.
Make requests from the US Treasury Fiscal Data API endpoints.
Provide a set of wrappers to call all the endpoints of UptimeRobot API which includes various kind of ping, keep-alive and speed tests. See <https://uptimerobot.com/> for more information.
United is a software tool which can be downloaded at the following website <http://www.schroepl.net/pbm/software/united/>. In general, it is a virtual manager game for football teams. This package contains helpful functions for determining an optimal formation for a virtual match in United. E.g. knowing that the opponent has a strong defensive it is advisable to beat him in the midfield. Furthermore, this package contains functions for computing the optimal usage of hardness in a game.
The Upsilon test assesses association among categorical variables against the null hypothesis of independence (Luo 2021 MS thesis; ProQuest Publication No. 28649813). While promoting dominant function patterns, it demotes non-dominant function patterns. It is robust to low expected count---continuity correction like Yates's seems unnecessary. Using a common null population following a uniform distribution, contingency tables are comparable by statistical significance---not the case for most association tests defining a varying null population by tensor product of observed marginals. Although Pearson's chi-squared test, Fisher's exact test, and Woolf's G-test (related to mutual information) are useful in some contexts, the Upsilon test appeals to ranking association patterns not necessarily following same marginal distributions, such as in count data from DNA and RNA sequencing---a rapidly expanding frontier in modern science.
This package provides tools to detect and correct measurement-unit errors in multivariate numeric data using model-based clustering. Gaussian mixture models with user-defined translation vectors identify clusters of records that differ in scale or unit. Core functionality includes cluster assignment via the EM algorithm, error correction based on posterior probabilities and pairwise scatterplot visualizations. For more details see Di Zio, Guarnera and Luzi (2005) <https://www150.statcan.gc.ca/n1/en/pub/12-001-x/2005001/article/8087-eng.pdf>.
This package provides a set of custom R Markdown templates for documents and presentations with the University of Illinois at Urbana-Champaign (UIUC) color scheme and identity standards.
Allows users to access live UK energy market information via various APIs.
Complete work flow for the analysis of pharmacokinetic pharmacodynamic (PKPD), physiologically-based pharmacokinetic (PBPK) and systems pharmacology models including: creation of ordinary differential equation-based models, pooled parameter estimation, individual/population based simulations, rule-based simulations for clinical trial design and modeling assays, deployment with a customizable Shiny app, and non-compartmental analysis. System-specific analysis templates can be generated and each element includes integrated reporting with PowerPoint and Word'.
This package contains a WGS84 datum map of the USA, which includes all Commonwealth and State boundaries & also includes Puerto Rico and the U.S. Virgin Islands. This map is a reprojection of the NAD83 datum map from the USGS National Map. This package contains a subset of the data included in the USA.state.boundaries.data package, which is available in a drat repository. To install that data package, please follow the instructions at <https://gitlab.com/iembry/usa.state.boundaries.data>.
Uniform sampling on various geometric shapes, such as spheres, ellipsoids, simplices.
This package provides an integrated workflow for UK Biobank Research Analysis Platform (RAP) hosted and RAP-generated analysis tables. The package supports RAP phenotype extraction planning, predefined variable sets and disease definitions, standardized baseline preprocessing, multi-source endpoint ascertainment, prevalent and incident case classification, survival-ready cohort construction, regression, multiple imputation, propensity score analysis, mediation analysis, subgroup and sensitivity analyses, machine learning, proteomics enrichment and protein-protein interaction analysis, and publication-oriented visualization. The package workflow is described in He et al. (2026) <doi:10.64898/2026.06.19.26356057>.
Core functions necessary for using The Globe and Mail's R data journalism template, startr', along with utilities for day-to-day data journalism tasks, such as reading and writing files, producing graphics and cleaning up datasets.
This package provides convenience functions for user experience research with an emphasis on quantitative user experience testing and reporting. The functions are designed to translate statistical approaches to applied user experience research.
An educational toolkit for learning statistical concepts through interactive exploration. Provides functions for basic statistics (mean, variance, etc.) and probability distributions with step-by-step explanations and interactive learning modes. Each function can be used for simple calculations, detailed learning with explanations, or interactive practice with feedback.
Calculates one-sample unbiased central moment estimates and two-sample pooled estimates up to 6th order, including estimates of powers and products of central moments. Provides the machinery for obtaining unbiased central moment estimators beyond 6th order by generating expressions for expectations of raw sample moments and their powers and products. Gerlovina and Hubbard (2019) <doi:10.1080/25742558.2019.1701917>.
This package provides tools for assigning molecular formulas from exact masses obtained by ultrahigh-resolution mass spectrometry. The methodology follows the workflow described in Leefmann et al. (2019) <doi:10.1002/rcm.8315>. The package supports the inspection, filtering and visualization of molecular formula data and includes utilities for calculating common molecular parameters (e.g., double bond equivalents, DBE). A graphical user interface is available via the shiny'-based ume application.
Bindings to Uno (Unifying Nonlinear Optimization), a C++ solver for smooth nonlinearly constrained optimization. Uno unifies Lagrange-Newton methods, including sequential quadratic programming and interior-point methods, by decomposing them into interacting building blocks (constraint-relaxation, inequality-handling, Hessian, and globalization strategies) that can be freely combined, either through options or through presets that reproduce established solvers such as filterSQP and IPOPT'. The framework is described in Vanaret and Leyffer (2024) <doi:10.48550/arXiv.2406.13454>.
This package provides a collection of parametric quantile regression models for bounded data. At present, the package provides 13 parametric quantile regression models. It can specify regression structure for any quantile and shape parameters. It also provides several S3 methods to extract information from fitted model, such as residual analysis, prediction, plotting, and model comparison. For more computation efficient the [dpqr]'s, likelihood, score and hessian functions are written in C++. For further details see Mazucheli et. al (2022) <doi:10.1016/j.cmpb.2022.106816>.