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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-toxcrit 1.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=ToxCrit
Licenses: GPL 3
Build system: r
Synopsis: Calculates Safety Stopping Boundaries for a Single-Arm Trial using Bayes
Description:

Computation of stopping boundaries for a single-arm trial using a Bayesian criterion; i.e., for each m<=n (n= total patient number of the trial) the smallest number of observed toxicities is calculated leading to the termination of the trial/accrual according to the specified criteria. The probabilities of stopping the trial/accrual at and up until (resp.) the m-th patient (m<=n) is also calculated. This design is more conservative than the frequentist approach (using Clopper Pearson CIs) which might be preferred as it concerns safety.See also Aamot et.al.(2010) "Continuous monitoring of toxicity in clinical trials - simulating the risk of stopping prematurely" <doi:10.5414/cpp48476>.

r-tidybde 0.5.0
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-scales@1.4.0 r-readr@2.1.6 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://ropenspain.github.io/tidyBdE/
Licenses: GPL 3+
Build system: r
Synopsis: Download Data from Bank of Spain
Description:

This package provides tools to download data series from Banco de España ('BdE') on tibble format. Banco de España is the national central bank and, within the framework of the Single Supervisory Mechanism ('SSM'), the supervisor of the Spanish banking system along with the European Central Bank. This package is in no way sponsored endorsed or administered by Banco de España'.

r-tinytable 0.15.2
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://vincentarelbundock.github.io/tinytable/
Licenses: GPL 3+
Build system: r
Synopsis: Simple and Configurable Tables in 'HTML', 'LaTeX', 'Markdown', 'Word', 'PNG', 'PDF', and 'Typst' Formats
Description:

Create highly customized tables with this simple and dependency-free package. Data frames can be converted to HTML', LaTeX', Markdown', Word', PNG', PDF', or Typst tables. The user interface is minimalist and easy to learn. The syntax is concise. HTML tables can be customized using the flexible Bootstrap framework, and LaTeX code with the tabularray package.

r-tidyplus 0.2.0
Propagated dependencies: r-vctrs@0.6.5 r-tidyselect@1.2.1 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-stringi@1.8.7 r-rlang@1.1.6 r-lifecycle@1.0.4 r-dplyr@1.1.4 r-chk@0.10.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://poissonconsulting.github.io/tidyplus/
Licenses: Expat
Build system: r
Synopsis: Additional 'tidyverse' Functions
Description:

This package provides functions such as str_crush(), add_missing_column(), coalesce_data() and drop_na_all() that complement tidyverse functionality or functions that provide alternative behaviors such as if_else2() and str_detect2().

r-tscs 0.1.1
Propagated dependencies: r-tseries@0.10-58 r-rgl@1.3.31 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TSCS
Licenses: GPL 2+
Build system: r
Synopsis: Time Series Cointegrated System
Description:

This package provides a set of functions to implement Time Series Cointegrated System (TSCS) spatial interpolation and relevant data visualization.

r-tulip 1.0.2
Propagated dependencies: r-tensr@1.0.2 r-matrix@1.7-4 r-mass@7.3-65 r-glmnet@4.1-10
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TULIP
Licenses: GPL 2
Build system: r
Synopsis: Toolbox for Linear Discriminant Analysis with Penalties
Description:

Integrates several popular high-dimensional methods based on Linear Discriminant Analysis (LDA) and provides a comprehensive and user-friendly toolbox for linear, semi-parametric and tensor-variate classification as mentioned in Yuqing Pan, Qing Mai and Xin Zhang (2019) <arXiv:1904.03469>. Functions are included for covariate adjustment, model fitting, cross validation and prediction.

r-tensormiss 1.1.1
Propagated dependencies: r-rtensor@1.4.9 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tensorMiss
Licenses: GPL 3
Build system: r
Synopsis: Handle Missing Tensor Data with C++ Integration
Description:

To handle higher-order tensor data. See Kolda and Bader (2009) <doi:10.1137/07070111X> for details on tensor. While existing packages on tensor data extend the base array class to some data classes, this package serves as an alternative resort to handle tensor only as array class. Some functionalities related to missingness are also supported.

r-table1 1.5.1
Propagated dependencies: r-yaml@2.3.10 r-knitr@1.50 r-htmltools@0.5.8.1 r-formula@1.2-5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/benjaminrich/table1
Licenses: GPL 3
Build system: r
Synopsis: Tables of Descriptive Statistics in HTML
Description:

Create HTML tables of descriptive statistics, as one would expect to see as the first table (i.e. "Table 1") in a medical/epidemiological journal article.

r-traudem 1.0.3
Propagated dependencies: r-withr@3.0.2 r-sys@3.4.3 r-rlang@1.1.6 r-purrr@1.2.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://lucarraro.github.io/traudem/
Licenses: Expat
Build system: r
Synopsis: Use TauDEM
Description:

Simple trustworthy utility functions to use TauDEM (Terrain Analysis Using Digital Elevation Models <https://hydrology.usu.edu/taudem/taudem5/>) command-line interface. This package provides a guide to installation of TauDEM and its dependencies GDAL (Geopatial Data Abstraction Library) and MPI (Message Passing Interface) for different operating systems. Moreover, it checks that TauDEM and its dependencies are correctly installed and included to the PATH, and it provides wrapper commands for calling TauDEM methods from R.

r-trtswitch 0.2.3
Propagated dependencies: r-rlang@1.1.6 r-rcppthread@2.2.0 r-rcppparallel@5.1.11-1 r-rcpp@1.1.0 r-ggplot2@4.0.1 r-data-table@1.17.8 r-cowplot@1.2.0 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/kaifenglu/trtswitch
Licenses: GPL 2+
Build system: r
Synopsis: Treatment Switching
Description:

This package implements rank preserving structural failure time model (RPSFTM), iterative parameter estimation (IPE), inverse probability of censoring weights (IPCW), marginal structural model (MSM), simple two-stage estimation (TSEsimp), and improved two-stage estimation with g-estimation (TSEgest) methods for treatment switching in randomized clinical trials.

r-tai 0.2.2
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tAI
Licenses: GPL 2+
Build system: r
Synopsis: The tRNA Adaptation Index
Description:

This package provides functions and example files to calculate the tRNA adaptation index, a measure of the level of co-adaptation between the set of tRNA genes and the codon usage bias of protein-coding genes in a given genome. The methodology is described in dos Reis, Wernisch and Savva (2003) <doi:10.1093/nar/gkg897>, and dos Reis, Savva and Wernisch (2004) <doi:10.1093/nar/gkh834>.

r-trapezoid 2.0-2
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=trapezoid
Licenses: GPL 3
Build system: r
Synopsis: The Trapezoidal Distribution
Description:

The trapezoid package provides dtrapezoid', ptrapezoid', qtrapezoid', and rtrapezoid functions for the trapezoidal distribution.

r-trending 0.1.0
Propagated dependencies: r-vctrs@0.6.5 r-tibble@3.3.0 r-pillar@1.11.1 r-mass@7.3-65 r-citools@0.6.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/reconverse/trending
Licenses: Expat
Build system: r
Synopsis: Model Temporal Trends
Description:

This package provides a coherent interface to multiple modelling tools for fitting trends along with a standardised approach for generating confidence and prediction intervals.

r-tau 0.0-26
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tau
Licenses: GPL 2
Build system: r
Synopsis: Text Analysis Utilities
Description:

Utilities for text analysis.

r-tfer 1.3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tfer
Licenses: GPL 2
Build system: r
Synopsis: Forensic Glass Transfer Probabilities
Description:

Statistical interpretation of forensic glass transfer (Simulation of the probability distribution of recovered glass fragments).

r-tailtransform 2.0.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tailTransform
Licenses: GPL 2
Build system: r
Synopsis: Symmetric Transformation of Tails for Plotting Differences
Description:

When plotting treated-minus-control differences, after-minus-before changes, or difference-in-differences, the ttrans() function symmetrically transforms the positive and negative tails to aid plotting. The package includes an observational study with three control groups and an unaffected outcome; see Rosenbaum (2022) <doi:10.1080/00031305.2022.2063944>.

r-treemapify 2.6.0
Propagated dependencies: r-svglite@2.2.2 r-ggplot2@4.0.1 r-ggfittext@0.10.2 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://wilkox.org/treemapify/
Licenses: GPL 3+
Build system: r
Synopsis: Draw Treemaps in 'ggplot2'
Description:

This package provides ggplot2 geoms for drawing treemaps.

r-tip 0.1.0
Propagated dependencies: r-rlang@1.1.6 r-network@1.19.0 r-mniw@1.0.2 r-laplacesdemon@16.1.6 r-igraph@2.2.1 r-ggplot2@4.0.1 r-ggally@2.4.0 r-foreach@1.5.2 r-doparallel@1.0.17 r-changepoint@2.3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tip
Licenses: Expat
Build system: r
Synopsis: Bayesian Clustering Using the Table Invitation Prior (TIP)
Description:

Cluster data without specifying the number of clusters using the Table Invitation Prior (TIP) introduced in the paper "Clustering Gene Expression Using the Table Invitation Prior" by Charles W. Harrison, Qing He, and Hsin-Hsiung Huang (2022) <doi:10.3390/genes13112036>. TIP is a Bayesian prior that uses pairwise distance and similarity information to cluster vectors, matrices, or tensors.

r-trialr 0.1.6
Propagated dependencies: r-tidybayes@3.0.7 r-tibble@3.3.0 r-stringr@1.6.0 r-stanheaders@2.32.10 r-rstantools@2.5.0 r-rstan@2.32.7 r-rlang@1.1.6 r-rcppparallel@5.1.11-1 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-purrr@1.2.0 r-mass@7.3-65 r-magrittr@2.0.4 r-gtools@3.9.5 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-coda@0.19-4.1 r-binom@1.1-1.1 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/brockk/trialr
Licenses: GPL 3+
Build system: r
Synopsis: Clinical Trial Designs in 'rstan'
Description:

This package provides a collection of clinical trial designs and methods, implemented in rstan and R, including: the Continual Reassessment Method by O'Quigley et al. (1990) <doi:10.2307/2531628>; EffTox by Thall & Cook (2004) <doi:10.1111/j.0006-341X.2004.00218.x>; the two-parameter logistic method of Neuenschwander, Branson & Sponer (2008) <doi:10.1002/sim.3230>; and the Augmented Binary method by Wason & Seaman (2013) <doi:10.1002/sim.5867>; and more. We provide functions to aid model-fitting and analysis. The rstan implementations may also serve as a cookbook to anyone looking to extend or embellish these models. We hope that this package encourages the use of Bayesian methods in clinical trials. There is a preponderance of early phase trial designs because this is where Bayesian methods are used most. If there is a method you would like implemented, please get in touch.

r-tapnet 0.6
Propagated dependencies: r-vegan@2.7-2 r-phytools@2.5-2 r-mpsem@0.6-1 r-bipartite@2.23 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/biometry/tapnet
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Trait Matching and Abundance for Predicting Bipartite Networks
Description:

This package provides functions to produce, fit and predict from bipartite networks with abundance, trait and phylogenetic information. Its methods are described in detail in Benadi, G., Dormann, C.F., Fruend, J., Stephan, R. & Vazquez, D.P. (2021) Quantitative prediction of interactions in bipartite networks based on traits, abundances, and phylogeny. The American Naturalist, in press.

r-tablematrix 0.82.0
Propagated dependencies: r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tableMatrix
Licenses: GPL 2
Build system: r
Synopsis: Combines 'data.table' and 'matrix' Classes
Description:

This package provides two classes extending data.table class. Simple tableList class wraps data.table and any additional structures together. More complex tableMatrix class combines data.table and matrix'. See <http://github.com/InferenceTechnologies/tableMatrix> for more information and examples.

r-tempr 0.10.1.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tempR
Licenses: GPL 2+
Build system: r
Synopsis: Temporal Sensory Data Analysis
Description:

Analysis and visualization of data from temporal sensory methods, including for temporal check-all-that-apply (TCATA) and temporal dominance of sensations (TDS). Methods are mainly from manuscripts by Castura, J.C., Antúnez, L., Giménez, A., and Ares, G. (2016) <doi:10.1016/j.foodqual.2015.06.017>, Castura, Baker, and Ross (2016) <doi:10.1016/j.foodqual.2016.06.011>, and Pineau et al. (2009) <doi:10.1016/j.foodqual.2009.04.005>.

r-tsdf 1.1-8
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tsdf
Licenses: GPL 2
Build system: r
Synopsis: Two-/Three-Stage Designs for Phase 1&2 Clinical Trials
Description:

Calculate optimal Zhong's two-/three-stage Phase II designs (see Zhong (2012) <doi:10.1016/j.cct.2012.07.006>). Generate Target Toxicity decision table for Phase I dose-finding (two-/three-stage). This package also allows users to run dose-finding simulations based on customized decision table.

r-testscorer 1.7.2
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TestScorer
Licenses: GPL 2
Build system: r
Synopsis: GUI for Entering Test Items and Obtaining Raw and Transformed Scores
Description:

GUI for entering test items and obtaining raw and transformed scores. The results are shown on the console and can be saved to a tabular text file for further statistical analysis. The user can define his own tests and scoring procedures through a GUI.

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Total results: 68655