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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-mclust 6.1.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://www.stat.washington.edu/mclust/
Licenses: GPL 2+
Synopsis: Gaussian mixture modelling for model-based clustering etc.
Description:

This package provides Gaussian finite mixture models fitted via EM algorithm for model-based clustering, classification, and density estimation, including Bayesian regularization, dimension reduction for visualisation, and resampling-based inference.

r-servr 0.32
Propagated dependencies: r-httpuv@1.6.16 r-jsonlite@2.0.0 r-mime@0.13 r-xfun@0.52
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/yihui/servr
Licenses: Expat
Synopsis: Simple HTTP server to serve static files or dynamic documents
Description:

Servr provides an HTTP server in R to serve static files, or dynamic documents that can be converted to HTML files (e.g., R Markdown) under a given directory.

r-proj4 1.0-15
Dependencies: proj@9.3.1 zlib@1.3.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://www.rforge.net/proj4/
Licenses: GPL 2
Synopsis: Simple interface to the PROJ.4 cartographic projections library
Description:

This package provides a simple interface to lat/long projection and datum transformation of the PROJ.4 cartographic projections library. It allows transformation of geographic coordinates from one projection and/or datum to another.

r-bqtl 1.0-38
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: http://famprevmed.ucsd.edu/faculty/cberry/bqtl/
Licenses: GPL 2+
Synopsis: Bayesian QTL mapping toolkit
Description:

This is a QTL mapping toolkit for inbred crosses and recombinant inbred lines. It includes maximum likelihood and Bayesian tools.

r-rainbow 3.8
Propagated dependencies: r-cluster@2.1.8.1 r-colorspace@2.1-1 r-hdrcde@3.4 r-ks@1.15.1 r-mass@7.3-65 r-pcapp@2.0-5
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/rainbow/
Licenses: GPL 3
Synopsis: Bagplots, boxplots and rainbow plots for functional data
Description:

This is a package for visualizing functional data and identifying functional outliers with bagplots, boxplots and rainbow plots.

r-perm 1.0-0.4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/perm/
Licenses: GPL 2+
Synopsis: Exact or asymptotic permutation tests
Description:

This package provides several methods for performing permutation tests. It has three main functions, to perform linear permutation tests. These tests are tests where the test statistic is the sum of the product of a covariate (usually group indicator) and the scores.

r-visnetwork 2.1.2
Propagated dependencies: r-htmltools@0.5.8.1 r-htmlwidgets@1.6.4 r-jsonlite@2.0.0 r-magrittr@2.0.3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://datastorm-open.github.io/visNetwork/
Licenses: Expat
Synopsis: Network Visualization using vis.js Library
Description:

This package provides an R interface to the vis.js JavaScript charting library. It allows an interactive visualization of networks.

r-bdgraph 2.73
Propagated dependencies: r-ggplot2@3.5.2 r-igraph@2.1.4 r-proc@1.18.5
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://www.uva.nl/profile/a.mohammadi
Licenses: GPL 2+
Synopsis: Bayesian structure learning in graphical models
Description:

This package provides statistical tools for Bayesian structure learning in undirected graphical models for continuous, discrete, and mixed data. It uses a trans-dimensional Markov Chain Monte Carlo (MCMC) approach based on a continuous-time birth-death process.

r-mcr 1.3.3.1
Propagated dependencies: r-robslopes@1.1.3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=mcr
Licenses: GPL 3+
Synopsis: Method comparison regression
Description:

Regression methods to quantify the relation between two measurement methods are provided by this package. In particular it addresses regression problems with errors in both variables and without repeated measurements. It implements the CLSI recommendations (see J. A. Budd et al. (2018, https://clsi.org/standards/products/method-evaluation/documents/ep09/) for analytical method comparison and bias estimation using patient samples. Furthermore, algorithms for Theil-Sen and equivariant Passing-Bablok estimators are implemented, see F. Dufey (2020, <doi:10.1515/ijb-2019-0157>) and J. Raymaekers and F. Dufey (2022, <arXiv:2202:08060>). A comprehensive overview over the implemented methods and references can be found in the manual pages mcr-package and mcreg.

r-pkgmaker 0.32.10
Propagated dependencies: r-assertthat@0.2.1 r-codetools@0.2-20 r-digest@0.6.37 r-registry@0.5-1 r-stringr@1.5.1 r-withr@3.0.2 r-xtable@1.8-4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://renozao.github.io/pkgmaker
Licenses: GPL 2+
Synopsis: Package development utilities
Description:

This package provides some low-level utilities to use for R package development. It currently provides managers for multiple package specific options and registries, vignette, unit test and bibtex related utilities.

r-modeldata 1.4.0
Propagated dependencies: r-dplyr@1.1.4 r-mass@7.3-65 r-purrr@1.0.4 r-rlang@1.1.6 r-tibble@3.2.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://modeldata.tidymodels.org
Licenses: Expat
Synopsis: Data sets useful for modeling packages
Description:

This package provides data sets used for demonstrating or testing model-related packages.

r-rpostgresql 0.7-8
Dependencies: postgresql@14.13
Propagated dependencies: r-dbi@1.2.3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/tomoakin/RPostgreSQL
Licenses: GPL 2
Synopsis: R interface to the PostgreSQL database system
Description:

This package provides a Database Interface (DBI) compliant driver for R to access PostgreSQL database systems.

r-gghighlight 0.4.1
Propagated dependencies: r-dplyr@1.1.4 r-ggplot2@3.5.2 r-ggrepel@0.9.6 r-lifecycle@1.0.4 r-purrr@1.0.4 r-rlang@1.1.6 r-tibble@3.2.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/yutannihilation/gghighlight/
Licenses: Expat
Synopsis: Highlight lines and points in ggplot2
Description:

Suppose we have data that has so many series that it is hard to identify them by their colors as the differences are so subtle. With gghighlight we can highlight those lines that match certain criteria. The result is a usual ggplot object, so it is fully customizable and can be used with custom themes and facets.

r-seuratobject 5.1.0
Propagated dependencies: r-future@1.49.0 r-future-apply@1.11.3 r-generics@0.1.4 r-lifecycle@1.0.4 r-matrix@1.7-3 r-progressr@0.15.1 r-rcpp@1.0.14 r-rcppeigen@0.3.4.0.2 r-rlang@1.1.6 r-sp@2.2-0 r-spam@2.11-1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://satijalab.org/seurat
Licenses: GPL 3
Synopsis: Data structures for single cell data
Description:

This package defines S4 classes for single-cell genomic data and associated information, such as dimensionality reduction embeddings, nearest-neighbor graphs, and spatially-resolved coordinates. It provides data access methods and R-native hooks to ensure the Seurat object is familiar to other R users.

r-formatr 1.14
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://yihui.org/formatr/
Licenses: GPL 3+
Synopsis: Format R code automatically
Description:

This package provides a function to format R source code. Spaces and indent will be added to the code automatically, and comments will be preserved under certain conditions, so that R code will be more human-readable and tidy. There is also a Shiny app as a user interface in this package.

r-spatstat-random 3.4-1
Propagated dependencies: r-spatstat-data@3.1-6 r-spatstat-geom@3.4-1 r-spatstat-univar@3.1-3 r-spatstat-utils@3.1-4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://spatstat.org/
Licenses: GPL 2+
Synopsis: Random Generation Functionality for the 'spatstat' Family
Description:

This package provides functionality for random generation of spatial data in the spatstat family of packages. It generates random spatial patterns of points according to many simple rules (complete spatial randomness, Poisson, binomial, random grid, systematic, cell), randomised alteration of patterns (thinning, random shift, jittering), simulated realisations of random point processes (simple sequential inhibition, Matern inhibition models, Matern cluster process, Neyman-Scott cluster processes, log-Gaussian Cox processes, product shot noise cluster processes) and simulation of Gibbs point processes (Metropolis-Hastings birth-death-shift algorithm, alternating Gibbs sampler).

r-learnbayes 2.15.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/LearnBayes
Licenses: GPL 2+
Synopsis: Functions for learning Bayesian inference
Description:

This package provides a collection of functions helpful in learning the basic tenets of Bayesian statistical inference. It contains functions for summarizing basic one and two parameter posterior distributions and predictive distributions. It contains MCMC algorithms for summarizing posterior distributions defined by the user. It also contains functions for regression models, hierarchical models, Bayesian tests, and illustrations of Gibbs sampling.

r-misc3d 0.9-1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/misc3d/
Licenses: GPL 2+ GPL 3+
Synopsis: Miscellaneous 3D Plots
Description:

This package provides a collection of miscellaneous 3d plots, including isosurfaces.

r-rex 1.2.1
Propagated dependencies: r-lazyeval@0.2.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/kevinushey/rex
Licenses: Expat
Synopsis: Friendly regular expressions
Description:

This package provides a friendly interface for the construction of regular expressions. Regular expressions are a very powerful feature, however they are often difficult to interpret. Rex allows you to build complex regular expressions from human readable expressions

r-chromomap 4.1.1
Propagated dependencies: r-htmltools@0.5.8.1 r-htmlwidgets@1.6.4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=chromoMap
Licenses: GPL 3 ISC
Synopsis: Interactive genomic visualization of biological data
Description:

This package provides interactive, configurable and graphics visualization of the chromosome regions of any living organism allowing users to map chromosome elements (like genes, SNPs etc.) on the chromosome plot. It introduces a special plot viz. the "chromosome heatmap" that, in addition to mapping elements, can visualize the data associated with chromosome elements (like gene expression) in the form of heat colors. Users can investigate the detailed information about the mappings (like gene names or total genes mapped on a location) or can view the magnified single or double stranded view of the chromosome at a location showing each mapped element in sequential order. The package provide multiple features like visualizing multiple sets, chromosome heat-maps, group annotations, adding hyperlinks, and labelling. The plots can be saved as HTML documents that can be customized and shared easily. In addition, you can include them in R Markdown or in R Shiny applications.

r-numderiv 2016.8-1.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/numDeriv
Licenses: GPL 2
Synopsis: Accurate numerical derivatives
Description:

This package provides methods for calculating accurate numerical first and second order derivatives.

r-topicmodels 0.2-17
Dependencies: gsl@2.8
Propagated dependencies: r-modeltools@0.2-24 r-slam@0.1-55 r-tm@0.7-16
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=topicmodels
Licenses: GPL 2
Synopsis: Topic models
Description:

This package provides an interface to the C code for Latent Dirichlet Allocation (LDA) models and Correlated Topics Models (CTM) by David M. Blei and co-authors and the C++ code for fitting LDA models using Gibbs sampling by Xuan-Hieu Phan and co-authors.

r-venndiagram 1.7.3
Propagated dependencies: r-futile-logger@1.4.3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/VennDiagram/
Licenses: GPL 2+
Synopsis: Generate High-Resolution Venn and Euler Plots
Description:

This package provides a set of functions to generate high-resolution Venn and Euler plots. It includes handling for several special cases, including two-case scaling, and extensive customization of plot shape and structure.

r-semplot 1.1.6
Propagated dependencies: r-colorspace@2.1-1 r-corpcor@1.6.10 r-igraph@2.1.4 r-lavaan@0.6-19 r-lisreltor@0.3 r-openmx@2.22.7 r-plyr@1.8.9 r-qgraph@1.9.8 r-rockchalk@1.8.157 r-sem@3.1-16 r-xml@3.99-0.18
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/SachaEpskamp/semPlot
Licenses: GPL 2
Synopsis: Unified visualizations of structural equation models
Description:

Structural equation modeling (SEM) has a long history of representing models graphically as path diagrams. The semPlot package for R fills the gap between advanced, but time-consuming, graphical software and the limited graphics produced automatically by SEM software. In addition, semPlot offers more functionality than drawing path diagrams: it can act as a common ground for importing SEM results into R. Any result usable as input to semPlot can also be represented in any of the three popular SEM frame-works, as well as translated to input syntax for the R packages sem and lavaan.

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