_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-butterflyoptions 1.0.1
Propagated dependencies: r-tibble@3.3.0 r-magrittr@2.0.4 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=butterflyOptions
Licenses: GPL 3
Build system: r
Synopsis: Trading Butterfly Options Strategies
Description:

Trading of Butterfly Options Strategies is represented here through their Graphs. The graphic indicators, strategies, calculations, functions and all the discussions are for academic, research, and educational purposes only and should not be construed as investment advice and come with absolutely no Liability. Guy Cohen (â The Bible of Options Strategies (2nd ed.)â , 2015, ISBN: 9780133964028). Zura Kakushadze, Juan A. Serur (â 151 Trading Strategiesâ , 2018, ISBN: 9783030027919). John C. Hull (â Options, Futures, and Other Derivatives (11th ed.)â , 2022, ISBN: 9780136939979).

r-bspm 0.5.8
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran4linux.github.io/bspm/
Licenses: Expat
Build system: r
Synopsis: Bridge to System Package Manager
Description:

Enables binary package installations on Linux distributions. Provides functions to manage packages via the distribution's package manager. Also provides transparent integration with R's install.packages() and a fallback mechanism. When installed as a system package, interacts with the system's package manager without requiring administrative privileges via an integrated D-Bus service; otherwise, uses sudo. Currently, the following backends are supported: DNF, APT, ALPM.

r-bidimregression 2.0.1
Propagated dependencies: r-formula@1.2-5
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://CRAN.R-project.org/package=BiDimRegression/
Licenses: GPL 3
Build system: r
Synopsis: Calculates the Bidimensional Regression Between Two 2D Configurations
Description:

Calculates the bidimensional regression between two 2D configurations following the approach by Tobler (1965).

r-biopet 0.2.2
Propagated dependencies: r-vgam@1.1-13 r-proc@1.19.0.1 r-gridextra@2.3 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=BioPET
Licenses: GPL 2+
Build system: r
Synopsis: Biomarker Prognostic Enrichment Tool
Description:

Prognostic Enrichment is a clinical trial strategy of evaluating an intervention in a patient population with a higher rate of the unwanted event than the broader patient population (R. Temple (2010) <DOI:10.1038/clpt.2010.233>). A higher event rate translates to a lower sample size for the clinical trial, which can have both practical and ethical advantages. This package is a tool to help evaluate biomarkers for prognostic enrichment of clinical trials.

r-binb 0.0.7
Propagated dependencies: r-rmarkdown@2.30 r-knitr@1.50 r-codetools@0.2-20
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://github.com/eddelbuettel/binb
Licenses: GPL 2+
Build system: r
Synopsis: 'binb' is not 'Beamer'
Description:

This package provides a collection of LaTeX styles using Beamer customization for pdf-based presentation slides in RMarkdown'. At present it contains RMarkdown adaptations of the LaTeX themes Metropolis (formerly mtheme') theme by Matthias Vogelgesang and others (now included in TeXLive'), the IQSS by Ista Zahn (which is included here), and the Monash theme by Rob J Hyndman. Additional (free) fonts may be needed: Metropolis prefers Fira', and IQSS requires Libertinus'.

r-bcrm 0.5.4
Propagated dependencies: r-rlang@1.1.6 r-mvtnorm@1.3-3 r-knitr@1.50 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://github.com/mikesweeting/bcrm
Licenses: GPL 2+
Build system: r
Synopsis: Bayesian Continual Reassessment Method for Phase I Dose-Escalation Trials
Description:

This package implements a wide variety of one- and two-parameter Bayesian CRM designs. The program can run interactively, allowing the user to enter outcomes after each cohort has been recruited, or via simulation to assess operating characteristics. See Sweeting et al. (2013): <doi:10.18637/jss.v054.i13>.

r-bayesxsrc 3.0-7.1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://www.uni-goettingen.de/de/bayesx/550513.html
Licenses: GPL 2 GPL 3
Build system: r
Synopsis: Distribution of the 'BayesX' C++ Sources
Description:

BayesX performs Bayesian inference in structured additive regression (STAR) models. The R package BayesXsrc provides the BayesX command line tool for easy installation. A convenient R interface is provided in package R2BayesX.

r-bumblebee 0.1.0
Propagated dependencies: r-rmarkdown@2.30 r-magrittr@2.0.4 r-hmisc@5.2-4 r-gtools@3.9.5 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://magosil86.github.io/bumblebee/
Licenses: Expat
Build system: r
Synopsis: Quantify Disease Transmission Within and Between Population Groups
Description:

This package provides a simple tool to quantify the amount of transmission of an infectious disease of interest occurring within and between population groups. bumblebee uses counts of observed directed transmission pairs, identified phylogenetically from deep-sequence data or from epidemiological contacts, to quantify transmission flows within and between population groups accounting for sampling heterogeneity. Population groups might include: geographical areas (e.g. communities, regions), demographic groups (e.g. age, gender) or arms of a randomized clinical trial. See the bumblebee website for statistical theory, documentation and examples <https://magosil86.github.io/bumblebee/>.

r-boxr 0.3.7
Propagated dependencies: r-withr@3.0.2 r-tibble@3.3.0 r-stringr@1.6.0 r-rlang@1.1.6 r-rio@1.2.4 r-purrr@1.2.0 r-mime@0.13 r-magrittr@2.0.4 r-lifecycle@1.0.4 r-jsonlite@2.0.0 r-jose@1.2.1 r-httr@1.4.7 r-glue@1.8.0 r-fs@1.6.6 r-dplyr@1.1.4 r-digest@0.6.39 r-cli@3.6.5 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://r-box.github.io/boxr/
Licenses: Expat
Build system: r
Synopsis: Interface for the 'Box.com API'
Description:

An R interface for the remote file hosting service Box (<https://www.box.com/>). In addition to uploading and downloading files, this package includes functions which mirror base R operations for local files, (e.g. box_load(), box_save(), box_read(), box_setwd(), etc.), as well as git style functions for entire directories (e.g. box_fetch(), box_push()).

r-biomontools 1.2.4
Propagated dependencies: r-tidyselect@1.2.1 r-tidyr@1.3.1 r-rlang@1.1.6 r-maps@3.4.3 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://github.com/leppott/BioMonTools
Licenses: Expat
Build system: r
Synopsis: Biomonitoring and Bioassessment Calculations
Description:

An aid for manipulating data associated with biomonitoring and bioassessment. Calculations include metric calculation, marking of excluded taxa, subsampling, and multimetric index calculation. Targeted communities are benthic macroinvertebrates, fish, periphyton, and coral. As described in the Revised Rapid Bioassessment Protocols (Barbour et al. 1999) <https://archive.epa.gov/water/archive/web/html/index-14.html>.

r-bcdating 0.9.8
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=BCDating
Licenses: GPL 2
Build system: r
Synopsis: Business Cycle Dating and Plotting Tools
Description:

This package provides tools for Dating Business Cycles using Harding-Pagan (Quarterly Bry-Boschan) method and various plotting features.

r-bitsls 0.1.0
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=BiTSLS
Licenses: Expat
Build system: r
Synopsis: Bidirectional Two-Stage Least Squares Estimation
Description:

This package implements bidirectional two-stage least squares (Bi-TSLS) estimation for identifying bidirectional causal effects between two variables in the presence of unmeasured confounding. The method uses proxy variables (negative control exposure and outcome) along with at least one covariate to handle confounding.

r-bbnet 1.2.1
Propagated dependencies: r-tibble@3.3.0 r-igraph@2.2.1 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://github.com/vda1r22/bbnet
Licenses: GPL 2+
Build system: r
Synopsis: Create Simple Predictive Models on Bayesian Belief Networks
Description:

This package provides a system to build, visualise and evaluate Bayesian belief networks. The methods are described in Stafford et al. (2015) <doi:10.12688/f1000research.5981.1>.

r-brmsmargins 0.2.1
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-posterior@1.6.1 r-extraoperators@0.3.0 r-data-table@1.17.8 r-brms@2.23.0 r-bayestestr@0.17.0
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://joshuawiley.com/brmsmargins/
Licenses: GPL 3+
Build system: r
Synopsis: Bayesian Marginal Effects for 'brms' Models
Description:

Calculate Bayesian marginal effects, average marginal effects, and marginal coefficients (also called population averaged coefficients) for models fit using the brms package including fixed effects, mixed effects, and location scale models. These are based on marginal predictions that integrate out random effects if necessary (see for example <doi:10.1186/s12874-015-0046-6> and <doi:10.1111/biom.12707>).

r-bayesvl 1.0.0
Propagated dependencies: r-viridis@0.6.5 r-stanheaders@2.32.10 r-rstan@2.32.7 r-reshape2@1.4.5 r-ggplot2@4.0.1 r-coda@0.19-4.1 r-bnlearn@5.1 r-bayesplot@1.14.0
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://github.com/sshpa/bayesvl
Licenses: GPL 3+
Build system: r
Synopsis: Visually Learning the Graphical Structure of Bayesian Networks and Performing MCMC with 'Stan'
Description:

This package provides users with its associated functions for pedagogical purposes in visually learning Bayesian networks and Markov chain Monte Carlo (MCMC) computations. It enables users to: a) Create and examine the (starting) graphical structure of Bayesian networks; b) Create random Bayesian networks using a dataset with customized constraints; c) Generate Stan code for structures of Bayesian networks for sampling the data and learning parameters; d) Plot the network graphs; e) Perform Markov chain Monte Carlo computations and produce graphs for posteriors checks. The package refers to one reference item, which describes the methods and algorithms: Vuong, Quan-Hoang and La, Viet-Phuong (2019) <doi:10.31219/osf.io/w5dx6> The bayesvl R package. Open Science Framework (May 18).

r-bbmix 1.0.0
Propagated dependencies: r-stanheaders@2.32.10 r-rstan@2.32.7 r-rmutil@1.1.10 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-r-utils@2.13.0 r-data-table@1.17.8 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=bbmix
Licenses: GPL 2
Build system: r
Synopsis: Bayesian Model for Genotyping using RNA-Seq
Description:

The method models RNA-seq reads using a mixture of 3 beta-binomial distributions to generate posterior probabilities for genotyping bi-allelic single nucleotide polymorphisms. Elena Vigorito, Anne Barton, Costantino Pitzalis, Myles J. Lewis and Chris Wallace (2023) <doi:10.1093/bioinformatics/btad393> "BBmix: a Bayesian beta-binomial mixture model for accurate genotyping from RNA-sequencing.".

r-businessduration 0.2.0
Propagated dependencies: r-chron@2.3-62
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=BusinessDuration
Licenses: AGPL 3
Build system: r
Synopsis: Calculates Business Duration Between Two Dates
Description:

Calculates business duration between two dates. This excluding weekends, public holidays and non-business hours.

r-bayeslongitudinal 0.1.0
Propagated dependencies: r-mvtnorm@1.3-3 r-mass@7.3-65 r-learnbayes@2.15.1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=bayeslongitudinal
Licenses: GPL 2+
Build system: r
Synopsis: Adjust Longitudinal Regression Models Using Bayesian Methodology
Description:

Adjusts longitudinal regression models using Bayesian methodology for covariance structures of composite symmetry (SC), autoregressive ones of order 1 AR (1) and autoregressive moving average of order (1,1) ARMA (1,1).

r-bipd 0.3
Propagated dependencies: r-rjags@4-17 r-mvtnorm@1.3-3 r-dplyr@1.1.4 r-coda@0.19-4.1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=bipd
Licenses: GPL 3
Build system: r
Synopsis: Bayesian Individual Patient Data Meta-Analysis using 'JAGS'
Description:

We use a Bayesian approach to run individual patient data meta-analysis and network meta-analysis using JAGS'. The methods incorporate shrinkage methods and calculate patient-specific treatment effects as described in Seo et al. (2021) <DOI:10.1002/sim.8859>. This package also includes user-friendly functions that impute missing data in an individual patient data using mice-related packages.

r-bursa 0.1.0
Propagated dependencies: r-stringr@1.6.0 r-rvest@1.0.5 r-readr@2.1.6 r-openxlsx@4.2.8.1 r-jsonlite@2.0.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://github.com/ozancanozdemir/bursa
Licenses: Expat
Build system: r
Synopsis: R Wrapper for Bursa Municipality Open Data Portal
Description:

Call the data wrappers for Bursa Metropolitan Municipality's Open Data Portal <https://acikyesil.bursa.bel.tr/>. This will return all datasets stored in different formats.

r-bcfm 1.0.0
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-rcolorbrewer@1.1-3 r-psych@2.5.6 r-mvtnorm@1.3-3 r-laplacesdemon@16.1.6 r-gridextra@2.3 r-ggpubr@0.6.2 r-ggplot2@4.0.1 r-fastmatrix@0.6-6 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://github.com/ategge/BCFM
Licenses: GPL 3+
Build system: r
Synopsis: Bayesian Clustering Factor Models
Description:

This package implements the Bayesian Clustering Factor Models (BCFM) for simultaneous clustering and latent factor analysis of multivariate longitudinal data. The model accounts for within-cluster dependence through shared latent factors while allowing heterogeneity across clusters, enabling flexible covariance modeling in high-dimensional settings. Inference is performed using Markov chain Monte Carlo (MCMC) methods with computationally intensive steps implemented via Rcpp'. Model selection and visualization tools are provided. The methodology is described in Shin, Ferreira, and Tegge (2018) <doi:10.1002/sim.70350>.

r-bfboinet 0.4.0
Propagated dependencies: r-tidyselect@1.2.1 r-magrittr@2.0.4 r-iso@0.0-21 r-dplyr@1.1.4 r-copula@1.1-7
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=bfboinet
Licenses: GPL 3
Build system: r
Synopsis: Backfill Bayesian Optimal Interval Design Using Efficacy and Toxicity
Description:

The backfill Bayesian optimal interval design using efficacy and toxicity outcomes for dose optimization (BF-BOIN-ET) design is a novel clinical trial design to allow patients to be backfilled at lower doses during a dose-finding trial while prioritizing the dose-escalation cohort to explore a higher dose. The advantages compared to the other designs in terms of the percentage of correct optimal dose (OD) selection, reducing the sample size, and shortening the duration of the trial, in various realistic setting.

r-bs4cards 0.1.1
Propagated dependencies: r-rlang@1.1.6 r-magrittr@2.0.4 r-htmltools@0.5.8.1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://github.com/djnavarro/bs4cards
Licenses: Expat
Build system: r
Synopsis: Generate Bootstrap Cards
Description:

Allows the user to generate bootstrap cards within R markdown documents. Intended for use in conjunction with R markdown HTML outputs and other formats that support the bootstrap 4 library.

r-bsub 2.0.6
Propagated dependencies: r-ssh@0.9.4 r-igraph@2.2.1 r-globaloptions@0.1.2 r-getoptlong@1.0.5 r-digest@0.6.39 r-crayon@1.5.3 r-codetools@0.2-20 r-clisymbols@1.2.0
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://github.com/jokergoo/bsub
Licenses: Expat
Build system: r
Synopsis: Submitter and Monitor of the 'LSF Cluster'
Description:

It submits R code/R scripts/shell commands to LSF cluster (<https://en.wikipedia.org/wiki/Platform_LSF>, the bsub system) without leaving R. There is also an interactive shiny application for monitoring job status.

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Total results: 69112