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      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-simplercache 0.3.3
Propagated dependencies: r-digest@0.6.39
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=simpleRCache
Licenses: LGPL 2.0+
Build system: r
Synopsis: Simple R Cache
Description:

Simple result caching in R based on R.cache. The global environment is not considered when caching results simplifying moving files between multiple instances of R. Relies on more base functions than R.cache (e.g. cached results are saved using saveRDS() and readRDS()).

r-shinystoreplus 1.6
Propagated dependencies: r-shinywidgets@0.9.0 r-shiny@1.11.1 r-jsonlite@2.0.0 r-htmltools@0.5.8.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://shinystoreplus.obi.obianom.com
Licenses: Expat
Build system: r
Synopsis: Secure in-Browser and Database Storage for 'shiny' Inputs, Outputs, Views and User Likes
Description:

Store persistent and synchronized data from shiny inputs within the browser. Refresh shiny applications and preserve user-inputs over multiple sessions. A database-like storage format is implemented using Dexie.js <https://dexie.org>, a minimal wrapper for IndexedDB'. Transfer browser link parameters to shiny input or output values. Store app visitor views, likes and followers.

r-staninside 0.0.4
Propagated dependencies: r-rappdirs@0.3.3 r-fs@1.6.6 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/medewitt/staninside
Licenses: Expat
Build system: r
Synopsis: Facilitating the Use of 'Stan' Within Packages
Description:

Infrastructure and functions that can be used for integrating Stan (Carpenter et al. (2017) <doi:10.18637/jss.v076.i01>) code into stand alone R packages which in turn use the CmdStan engine which is often accessed through CmdStanR'. Details given in Stan Development Team (2025) <https://mc-stan.org/cmdstanr/>. Using CmdStanR and pre-written Stan code can make package installation easy. Using staninside offers a way to cache user-compiled Stan models in user-specified directories reducing the need to recompile the same model multiple times.

r-semmcmc 0.0.6
Propagated dependencies: r-msm@1.8.2 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=semmcmc
Licenses: GPL 3
Build system: r
Synopsis: Bayesian Structural Equation Modeling in Multiple Omics Data Integration
Description:

This package provides Markov Chain Monte Carlo (MCMC) routine for the structural equation modelling described in Maity et. al. (2020) <doi:10.1093/bioinformatics/btaa286>. This MCMC sampler is useful when one attempts to perform an integrative survival analysis for multiple platforms of the Omics data where the response is time to event and the predictors are different omics expressions for different platforms.

r-shrink 1.2.3
Propagated dependencies: r-survival@3.8-3 r-rms@8.1-0 r-mfp@1.5.5.1 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/biometrician/shrink
Licenses: GPL 3
Build system: r
Synopsis: Global, Parameterwise and Joint Shrinkage Factor Estimation
Description:

The predictive value of a statistical model can often be improved by applying shrinkage methods. This can be achieved, e.g., by regularized regression or empirical Bayes approaches. Various types of shrinkage factors can also be estimated after a maximum likelihood. While global shrinkage modifies all regression coefficients by the same factor, parameterwise shrinkage factors differ between regression coefficients. With variables which are either highly correlated or associated with regard to contents, such as several columns of a design matrix describing a nonlinear effect, parameterwise shrinkage factors are not interpretable and a compromise between global and parameterwise shrinkage, termed joint shrinkage', is a useful extension. A computational shortcut to resampling-based shrinkage factor estimation based on DFBETA residuals can be applied. Global, parameterwise and joint shrinkage for models fitted by lm(), glm(), coxph(), or mfp() is available.

r-smile 1.1.0
Dependencies: proj@9.3.1 geos@3.12.1 gdal@3.8.2
Propagated dependencies: r-sf@1.0-23 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-numderiv@2016.8-1.1 r-mvtnorm@1.3-3 r-matrix@1.7-4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://lcgodoy.me/smile/
Licenses: GPL 3
Build system: r
Synopsis: Spatial Misalignment: Interpolation, Linkage, and Estimation
Description:

This package provides functions to estimate, predict and interpolate areal data. For estimation and prediction we assume areal data is an average of an underlying continuous spatial process as in Moraga et al. (2017) <doi:10.1016/j.spasta.2017.04.006>, Johnson et al. (2020) <doi:10.1186/s12942-020-00200-w>, and Wilson and Wakefield (2020) <doi:10.1093/biostatistics/kxy041>. The interpolation methodology is (mostly) based on Goodchild and Lam (1980, ISSN:01652273).

r-soiltaxonomy 0.2.8
Propagated dependencies: r-stringr@1.6.0 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/ncss-tech/SoilTaxonomy
Licenses: GPL 3+
Build system: r
Synopsis: System of Soil Classification for Making and Interpreting Soil Surveys
Description:

Taxonomic dictionaries, formative element lists, and functions related to the maintenance, development and application of U.S. Soil Taxonomy. Data and functionality are based on official U.S. Department of Agriculture sources including the latest edition of the Keys to Soil Taxonomy. Descriptions and metadata are obtained from the National Soil Information System or Soil Survey Geographic databases. Other sources are referenced in the data documentation. Provides tools for understanding and interacting with concepts in the U.S. Soil Taxonomic System. Most of the current utilities are for working with taxonomic concepts at the "higher" taxonomic levels: Order, Suborder, Great Group, and Subgroup.

r-shinytitle 0.1.0
Propagated dependencies: r-shiny@1.11.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/ashbaldry/shinytitle
Licenses: GPL 2
Build system: r
Synopsis: Update Browser Window Title in 'shiny' Session
Description:

Enables the ability to change or flash the title of the browser window during a shiny session.

r-squat 0.5.0
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-scales@1.4.0 r-roahd@1.4.3 r-rlang@1.1.6 r-rcppeigen@0.3.4.0.2 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-progressr@0.18.0 r-mfpca@1.3-11 r-ggrepel@0.9.6 r-ggplot2@4.0.1 r-future-apply@1.20.0 r-fundata@1.3-9 r-fdasrvf@2.4.3 r-fdacluster@0.4.2 r-dtw@1.23-1 r-dbscan@1.2.3 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/LMJL-Alea/squat
Licenses: GPL 3+
Build system: r
Synopsis: Statistics for Quaternion Temporal Data
Description:

An implementation of statistical tools for the analysis of rotation-valued time series and functional data. It relies on pre-existing quaternion data structure provided by the Eigen C++ library.

r-svgpanzoom 0.3.4
Propagated dependencies: r-htmlwidgets@1.6.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/timelyportfolio/svgPanZoom
Licenses: Expat
Build system: r
Synopsis: R 'Htmlwidget' to Add Pan and Zoom to Almost any R Graphic
Description:

This htmlwidget provides pan and zoom interactivity to R graphics, including base', lattice', and ggplot2'. The interactivity is provided through the svg-pan-zoom.js library. Various options to the widget can tailor the pan and zoom experience to nearly any user desire.

r-sampsizeval 1.0.0.0
Propagated dependencies: r-sn@2.1.1 r-pracma@2.4.6 r-plyr@1.8.9 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/mpavlou/sampsizeval
Licenses: Expat
Build system: r
Synopsis: Sample Size for Validation of Risk Models with Binary Outcomes
Description:

Estimation of the required sample size to validate a risk model for binary outcomes, based on the sample size equations proposed by Pavlou et al. (2021) <doi:10.1177/09622802211007522>. For precision-based sample size calculations, the user is required to enter the anticipated values of the C-statistic and outcome prevalence, which can be obtained from a previous study. The user also needs to specify the required precision (standard error) for the C-statistic, the calibration slope and the calibration in the large. The calculations are valid under the assumption of marginal normality for the distribution of the linear predictor.

r-spreg 1.0
Propagated dependencies: r-ucminf@1.2.2 r-sn@2.1.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SPreg
Licenses: GPL 3
Build system: r
Synopsis: Bias Reduction in the Skew-Probit Model for a Binary Response
Description:

This package provides a function for the estimation of parameters in a binary regression with the skew-probit link function. Naive MLE, Jeffrey type of prior and Cauchy prior type of penalization are implemented, as described in DongHyuk Lee and Samiran Sinha (2019+) <doi:10.1080/00949655.2019.1590579>.

r-sangertools 1.0.2
Propagated dependencies: r-tibble@3.3.0 r-scales@1.4.0 r-rlang@1.1.6 r-readxl@1.4.5 r-readr@2.1.6 r-odbc@1.6.4.1 r-magrittr@2.0.4 r-janitor@2.2.1 r-ggthemes@5.1.0 r-ggtext@0.1.2 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-dbi@1.2.3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SangerTools
Licenses: AGPL 3+
Build system: r
Synopsis: Tools for Population Health Management Analytics
Description:

Created for population health analytics and monitoring. The functions in this package work best when working with patient level Master Patient Index-like datasets . Built to be used by NHS bodies and other health service providers.

r-samplingin 1.1.1
Propagated dependencies: r-sampling@2.11 r-rlang@1.1.6 r-magrittr@2.0.4 r-dplyr@1.1.4 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=samplingin
Licenses: Expat
Build system: r
Synopsis: Dynamic Survey Sampling Solutions
Description:

This package provides a robust solution employing the SRS (Simple Random Sampling), systematic and PPS (Probability Proportional to Size) sampling methods, ensuring a methodical and representative selection of data. Seamlessly allocate predetermined allocations to smaller levels.

r-sptimer 3.3.3
Propagated dependencies: r-spacetime@1.3-3 r-sp@2.2-0 r-extradistr@1.10.0 r-coda@0.19-4.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=spTimer
Licenses: GPL 2+
Build system: r
Synopsis: Spatio-Temporal Bayesian Modelling
Description:

Fits, spatially predicts and temporally forecasts large amounts of space-time data using [1] Bayesian Gaussian Process (GP) Models, [2] Bayesian Auto-Regressive (AR) Models, and [3] Bayesian Gaussian Predictive Processes (GPP) based AR Models for spatio-temporal big-n problems. Bakar and Sahu (2015) <doi:10.18637/jss.v063.i15>.

r-streamcattools 0.10.0
Propagated dependencies: r-tigris@2.2.1 r-sf@1.0-23 r-patchwork@1.3.2 r-nhdplustools@1.4.2 r-jsonlite@2.0.0 r-httr2@1.2.1 r-ggplot2@4.0.1 r-ggpattern@1.2.1 r-curl@7.0.0 r-cowplot@1.2.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://usepa.github.io/StreamCatTools/
Licenses: CC0
Build system: r
Synopsis: 'StreamCatTools'
Description:

This package provides tools for using the StreamCat and LakeCat API and interacting with the StreamCat and LakeCat database. Convenience functions in the package wrap the API for StreamCat on <https://api.epa.gov/StreamCat/streams/metrics>.

r-seagraphs 0.1.3
Propagated dependencies: r-terra@1.8-86 r-sfnetworks@0.6.5 r-sf@1.0-23 r-leaflet-minicharts@0.6.3 r-leaflet-extras2@1.3.2 r-leaflet@2.2.3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/cadam00/SeaGraphs
Licenses: GPL 3
Build system: r
Synopsis: Sea Currents to Connectivity Transformation
Description:

Transformation of sea currents to connectivity data. Two files of horizontal and vertical currents flows are transformed into connectivity data in the form of sfnetwork', shapefile, edge list and adjacency matrix. An application example is shown at Nagkoulis et al. (2025) <doi:10.1016/j.dib.2024.111268>.

r-sae-projection 0.1.5
Propagated dependencies: r-yardstick@1.3.2 r-workflows@1.3.0 r-tune@2.0.1 r-tidymodels@1.4.1 r-themis@1.0.3 r-survey@4.4-8 r-rsample@1.3.1 r-rlang@1.1.6 r-recipes@1.3.1 r-ranger@0.17.0 r-randomforest@4.7-1.2 r-parsnip@1.3.3 r-lightgbm@4.6.0 r-dplyr@1.1.4 r-doparallel@1.0.17 r-cli@3.6.5 r-caret@7.0-1 r-bonsai@0.4.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/Alfrzlp/sae.projection
Licenses: Expat
Build system: r
Synopsis: Small Area Estimation Using Model-Assisted Projection Method
Description:

Combines information from two independent surveys using a model-assisted projection method. Designed for survey sampling scenarios where a large sample collects only auxiliary information (Survey 1) and a smaller sample provides data on both variables of interest and auxiliary variables (Survey 2). Implements a working model to generate synthetic values of the variable of interest by fitting the model to Survey 2 data and predicting values for Survey 1 based on its auxiliary variables (Kim & Rao, 2012) <doi:10.1093/biomet/asr063>.

r-spexvb 0.1.0
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-glmnet@4.1-10 r-foreach@1.5.2 r-caret@7.0-1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=spexvb
Licenses: Expat
Build system: r
Synopsis: Parameter Expanded Variational Bayes for High-Dimensional Linear Regression
Description:

This package implements a parameter expanded variational Bayes algorithm for linear regression models with high-dimensional variable selection. The methodology utilizes spike-and-slab priors to perform simultaneous estimation and selection. Details can be found in Olejua et al. (2024) <doi:10.21203/rs.3.rs-7208847/v1>.

r-smitidstruct 0.0.5
Propagated dependencies: r-sf@1.0-23 r-ggplot2@4.0.1 r-biostrings@2.78.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://informatique-mia.inra.fr/biosp/anr-smitid-project
Licenses: GPL 2+ FSDG-compatible
Build system: r
Synopsis: Data Structure and Manipulations Tool for Host and Viral Population
Description:

Statistical Methods for Inferring Transmissions of Infectious Diseases from deep sequencing data (SMITID). It allow sequence-space-time host and viral population data storage, indexation and querying.

r-safeframe 1.0.0
Propagated dependencies: r-tidyselect@1.2.1 r-rlang@1.1.6 r-lifecycle@1.0.4 r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://epiverse-trace.github.io/safeframe/
Licenses: Expat
Build system: r
Synopsis: Generic Data Tagging and Validation Tool
Description:

This package provides tools to help tag and validate data according to user-specified rules. The safeframe class adds variable level attributes to data.frame columns. Once tagged, these variables can be seamlessly used in downstream analyses, making data pipelines clearer, more robust, and more reliable.

r-spatialreg-hp 0.0-1
Propagated dependencies: r-vegan@2.7-2 r-spdep@1.4-1 r-spatialreg@1.4-2 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=spatialreg.hp
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Hierarchical Partitioning of R2 for Spatial Simultaneous Autoregressive Model
Description:

Conducts hierarchical partitioning to calculate individual contributions of spatial and predictors (groups) towards total R2 for spatial simultaneous autoregressive model.

r-simmer 4.4.7
Propagated dependencies: r-rcpp@1.1.0 r-magrittr@2.0.4 r-codetools@0.2-20
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://r-simmer.org
Licenses: GPL 2+
Build system: r
Synopsis: Discrete-Event Simulation for R
Description:

This package provides a process-oriented and trajectory-based Discrete-Event Simulation (DES) package for R. It is designed as a generic yet powerful framework. The architecture encloses a robust and fast simulation core written in C++ with automatic monitoring capabilities. It provides a rich and flexible R API that revolves around the concept of trajectory, a common path in the simulation model for entities of the same type. Documentation about simmer is provided by several vignettes included in this package, via the paper by Ucar, Smeets & Azcorra (2019, <doi:10.18637/jss.v090.i02>), and the paper by Ucar, Hernández, Serrano & Azcorra (2018, <doi:10.1109/MCOM.2018.1700960>); see citation("simmer") for details.

r-stepcount 0.3.2
Propagated dependencies: r-reticulate@1.44.1 r-readr@2.1.6 r-magrittr@2.0.4 r-lubridate@1.9.4 r-curl@7.0.0 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=stepcount
Licenses: Expat
Build system: r
Synopsis: Estimate Step Counts from 'Accelerometry' Data
Description:

Interfaces the stepcount Python module <https://github.com/OxWearables/stepcount> to estimate step counts and other activities from accelerometry data.

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