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Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-polypharmacy 1.0.0
Propagated dependencies: r-stringr@1.6.0 r-lubridate@1.9.4 r-itertools@0.1-3 r-foreach@1.5.2 r-doparallel@1.0.17 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=polypharmacy
Licenses: Expat
Build system: r
Synopsis: Calculate Several Polypharmacy Indicators
Description:

Analyse prescription drug deliveries to calculate several indicators of polypharmacy corresponding to the various definitions found in the literature. Bjerrum, L., Rosholm, J. U., Hallas, J., & Kragstrup, J. (1997) <doi:10.1007/s002280050329>. Chan, D.-C., Hao, Y.-T., & Wu, S.-C. (2009a) <doi:10.1002/pds.1712>. Fincke, B. G., Snyder, K., Cantillon, C., Gaehde, S., Standring, P., Fiore, L., ... Gagnon, D.R. (2005) <doi:10.1002/pds.966>. Hovstadius, B., Astrand, B., & Petersson, G. (2009) <doi:10.1186/1472-6904-9-11>. Hovstadius, B., Astrand, B., & Petersson, G. (2010) <doi:10.1002/pds.1921>. Kennerfalk, A., Ruigómez, A., Wallander, M.-A., Wilhelmsen, L., & Johansson, S. (2002) <doi:10.1345/aph.1A226>. Masnoon, N., Shakib, S., Kalisch-Ellett, L., & Caughey, G. E. (2017) <doi:10.1186/s12877-017-0621-2>. Narayan, S. W., & Nishtala, P. S. (2015) <doi:10.1007/s40801-015-0020-y>. Nishtala, P. S., & Salahudeen, M. S. (2015) <doi:10.1159/000368191>. Park, H. Y., Ryu, H. N., Shim, M. K., Sohn, H. S., & Kwon, J. W. (2016) <doi:10.5414/cp202484>. Veehof, L., Stewart, R., Haaijer-Ruskamp, F., & Jong, B. M. (2000) <doi:10.1093/fampra/17.3.261>.

r-pwranova 1.0.3
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/mutopsy/pwranova
Licenses: GPL 3
Build system: r
Synopsis: Power Analysis of Flexible ANOVA Designs and Related Tests
Description:

This package provides functions for conducting power analysis in ANOVA designs, including between-, within-, and mixed-factor designs, with full support for both main effects and interactions. The package allows calculation of statistical power, required total sample size, significance level, and minimal detectable effect sizes expressed as partial eta squared or Cohen's f for ANOVA terms and planned contrasts. In addition, complementary functions are included for common related tests such as t-tests and correlation tests, making the package a convenient toolkit for power analysis in experimental psychology and related fields.

r-phyext2 0.0.4
Propagated dependencies: r-phylobase@0.8.12 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=phyext2
Licenses: GPL 3
Build system: r
Synopsis: An Extension (for Package 'SigTree') of Some of the Classes in Package 'phylobase'
Description:

Based on (but not identical to) the no-longer-maintained package phyext', provides enhancements to phylobase classes, specifically for use by package SigTree'; provides classes and methods which help users manipulate branch-annotated trees (as in SigTree'); also provides support for a few other extra features.

r-pwrgsd 2.3.8
Propagated dependencies: r-survival@3.8-3
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PwrGSD
Licenses: GPL 2+
Build system: r
Synopsis: Power in a Group Sequential Design
Description:

This package provides tools for the evaluation of interim analysis plans for sequentially monitored trials on a survival endpoint; tools to construct efficacy and futility boundaries, for deriving power of a sequential design at a specified alternative, template for evaluating the performance of candidate plans at a set of time varying alternatives. See Izmirlian, G. (2014) <doi:10.4310/SII.2014.v7.n1.a4>.

r-pemultinom 0.1.1
Propagated dependencies: r-rcpp@1.1.0 r-nnet@7.3-20 r-magrittr@2.0.4 r-lpsolve@5.6.23 r-foreach@1.5.2 r-doparallel@1.0.17
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pemultinom
Licenses: GPL 2
Build system: r
Synopsis: L1-Penalized Multinomial Regression with Statistical Inference
Description:

We aim for fitting a multinomial regression model with Lasso penalty and doing statistical inference (calculating confidence intervals of coefficients and p-values for individual variables). It implements 1) the coordinate descent algorithm to fit an l1-penalized multinomial regression model (parameterized with a reference level); 2) the debiasing approach to obtain the inference results, which is described in "Tian, Y., Rusinek, H., Masurkar, A. V., & Feng, Y. (2024). L1â Penalized Multinomial Regression: Estimation, Inference, and Prediction, With an Application to Risk Factor Identification for Different Dementia Subtypes. Statistics in Medicine, 43(30), 5711-5747.".

r-pnt 0.1.0
Propagated dependencies: r-rlang@1.1.6 r-magrittr@2.0.4 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PnT
Licenses: Expat
Build system: r
Synopsis: Peak Finder
Description:

This program contains a function to find the peaks and troughs of a data set. It filters the set of peaks to remove noise based on the expected height and expected slope of a peak. Peaks that are too short (caused by random noise), or too shallow (part of the background data) are filtered out.

r-psgp 0.3-25
Propagated dependencies: r-sp@2.2-0 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-intamap@1.5-11 r-gstat@2.1-4 r-foreach@1.5.2 r-doparallel@1.0.17 r-automap@1.1-20
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=psgp
Licenses: GPL 2+
Build system: r
Synopsis: Projected Spatial Gaussian Process Methods
Description:

This package implements projected sparse Gaussian process Kriging ('Ingram et. al.', 2008, <doi:10.1007/s00477-007-0163-9>) as an additional method for the intamap package. More details on implementation ('Barillec et. al.', 2010, <doi:10.1016/j.cageo.2010.05.008>).

r-powerupr 1.1.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PowerUpR
Licenses: GPL 3+
Build system: r
Synopsis: Power Analysis Tools for Multilevel Randomized Experiments
Description:

Includes tools to calculate statistical power, minimum detectable effect size (MDES), MDES difference (MDESD), and minimum required sample size for various multilevel randomized experiments (MRE) with continuous outcomes. Accomodates 14 types of MRE designs to detect main treatment effect, seven types of MRE designs to detect moderated treatment effect (2-1-1, 2-1-2, 2-2-1, 2-2-2, 3-3-1, 3-3-2, and 3-3-3 designs; <total.lev> - <trt.lev> - <mod.lev>), five types of MRE designs to detect mediated treatment effects (2-1-1, 2-2-1, 3-1-1, 3-2-1, and 3-3-1 designs; <trt.lev> - <med.lev> - <out.lev>), four types of partially nested (PN) design to detect main treatment effect, and three types of PN designs to detect mediated treatment effects (2/1, 3/1, 3/2; <trt.arm.lev> / <ctrl.arm.lev>). See PowerUp! Excel series at <https://www.causalevaluation.org/>.

r-plotftir 1.2.1
Propagated dependencies: r-scales@1.4.0 r-rlang@1.1.6 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/NRCan/PlotFTIR
Licenses: GPL 3+
Build system: r
Synopsis: Plot FTIR Spectra
Description:

The goal of PlotFTIR is to easily and quickly kick-start the production of journal-quality Fourier Transform Infra-Red (FTIR) spectral plots in R using ggplot2'. The produced plots can be published directly or further modified by ggplot2 functions. L'objectif de PlotFTIR est de démarrer facilement et rapidement la production des tracés spectraux de spectroscopie infrarouge à transformée de Fourier (IRTF) de qualité journal dans R à l'aide de ggplot2'. Les tracés produits peuvent être publiés directement ou modifiés davantage par les fonctions ggplot2'.

r-pder 1.0-2
Propagated dependencies: r-plm@2.6-7
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pder
Licenses: GPL 2+
Build system: r
Synopsis: Panel Data Econometrics with R
Description:

Data sets for the Panel Data Econometrics with R <doi:10.1002/9781119504641> book.

r-pharmaverseraw 0.1.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://pharmaverse.github.io/pharmaverseraw/
Licenses: ASL 2.0
Build system: r
Synopsis: Raw Data for 'pharmaversesdtm' Package
Description:

This package provides a set of raw datasets used to create SDTM domains in pharmaversesdtm package.

r-perk 0.0.9.2
Propagated dependencies: r-zoo@1.8-14 r-viridis@0.6.5 r-tidyr@1.3.1 r-tibble@3.3.0 r-shinywidgets@0.9.0 r-shinyjs@2.1.0 r-shiny@1.11.1 r-readr@2.1.6 r-plotly@4.11.0 r-magrittr@2.0.4 r-golem@0.5.1 r-ggplot2@4.0.1 r-forcats@1.0.1 r-dt@0.34.0 r-dplyr@1.1.4 r-config@0.3.2 r-colourpicker@1.3.0 r-bs4dash@2.3.5
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/jkkishore85/PERK/
Licenses: GPL 3+
Build system: r
Synopsis: Predicting Environmental Concentration and Risk
Description:

This package provides a Shiny Web Application to predict and visualize concentrations of pharmaceuticals in the aqueous environment. Jagadeesan K., Barden R. and Kasprzyk-Hordern B. (2022) <https://www.ssrn.com/abstract=4306129>.

r-provolleyballr 0.1.0
Propagated dependencies: r-stringr@1.6.0 r-selenider@0.4.1 r-rvest@1.0.5 r-rlang@1.1.6 r-purrr@1.2.0 r-lifecycle@1.0.4 r-janitor@2.2.1 r-dplyr@1.1.4 r-curl@7.0.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/JeffreyRStevens/provolleyballr
Licenses: Expat
Build system: r
Synopsis: Extract Data from US Women's Professional Volleyball Websites
Description:

This package provides tools for scraping match statistics and player data from the Athletes Unlimited (UA) website <https://auprosports.com/volleyball/>, the League One Volleyball website <https://lovb.com>, and the Major League (MLV) website <https://provolleyball.com>.

r-penalizedclr 2.0.0
Propagated dependencies: r-survival@3.8-3 r-penalized@0.9-53 r-clogitl1@1.5
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=penalizedclr
Licenses: Expat
Build system: r
Synopsis: Integrative Penalized Conditional Logistic Regression
Description:

This package implements L1 and L2 penalized conditional logistic regression with penalty factors allowing for integration of multiple data sources. Implements stability selection for variable selection.

r-plugdensity 0.8-5
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: http://curves-etc.r-forge.r-project.org/
Licenses: GPL 2+
Build system: r
Synopsis: Plug-in Kernel Density Estimation
Description:

Kernel density estimation with global bandwidth selection via "plug-in".

r-psvd 1.1-0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=psvd
Licenses: GPL 2+
Build system: r
Synopsis: Eigendecomposition, Singular-Values and the Power Method
Description:

For a data matrix with m rows and n columns (m>=n), the power method is used to compute, simultaneously, the eigendecomposition of a square symmetric matrix. This result is used to obtain the singular value decomposition (SVD) and the principal component analysis (PCA) results. Compared to the classical SVD method, the first r singular values can be computed.

r-potions 0.2.0
Propagated dependencies: r-yaml@2.3.10 r-stringi@1.8.7 r-rrapply@1.2.8 r-rlang@1.1.6 r-purrr@1.2.0 r-lobstr@1.1.3 r-jsonlite@2.0.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://potions.ala.org.au
Licenses: FSDG-compatible
Build system: r
Synopsis: Easy Options Management
Description:

Store and retrieve data from options() using syntax derived from the here package. potions makes it straightforward to update and retrieve options, either in the workspace or during package development, without overwriting global options.

r-psinference 0.2.2
Propagated dependencies: r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/ricardomourarpm/PSinference
Licenses: GPL 2+
Build system: r
Synopsis: Inference for Released Plug-in Sampling Single Synthetic Dataset
Description:

Considering the singly imputed synthetic data generated via plug-in sampling under the multivariate normal model, draws inference procedures including the generalized variance, the sphericity test, the test for independence between two subsets of variables, and the test for the regression of one set of variables on the other. For more details see Klein et al. (2021) <doi:10.1007/s13571-019-00215-9>.

r-ppgm 1.1
Propagated dependencies: r-stringi@1.8.7 r-sp@2.2-0 r-sf@1.0-23 r-phytools@2.5-2 r-phangorn@2.12.1 r-gifski@1.32.0-2 r-geiger@2.0.11 r-foreach@1.5.2 r-fields@17.1 r-doparallel@1.0.17 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=ppgm
Licenses: GPL 3+
Build system: r
Synopsis: PaleoPhyloGeographic Modeling of Climate Niches and Species Distributions
Description:

Reconstruction of paleoclimate niches using phylogenetic comparative methods and projection reconstructed niches onto paleoclimate maps. The user can specify various models of trait evolution or estimate the best fit model, include fossils, use one or multiple phylogenies for inference, and make animations of shifting suitable habitat through time. This model was first used in Lawing and Polly (2011), and further implemented in Lawing et al (2016) and Rivera et al (2020). Lawing and Polly (2011) <doi:10.1371/journal.pone.0028554> "Pleistocene climate, phylogeny and climate envelope models: An integrative approach to better understand species response to climate change" Lawing et al (2016) <doi:10.1086/687202> "Including fossils in phylogenetic climate reconstructions: A deep time perspective on the climatic niche evolution and diversification of spiny lizards (Sceloporus)" Rivera et al (2020) <doi:10.1111/jbi.13915> "Reconstructing historical shifts in suitable habitat of Sceloporus lineages using phylogenetic niche modelling.".

r-primes 1.6.1
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/ironholds/primes
Licenses: Expat
Build system: r
Synopsis: Fast Functions for Prime Numbers
Description:

Fast functions for dealing with prime numbers, such as testing whether a number is prime and generating a sequence prime numbers. Additional functions include finding prime factors and Ruth-Aaron pairs, finding next and previous prime numbers in the series, finding or estimating the nth prime, estimating the number of primes less than or equal to an arbitrary number, computing primorials, prime k-tuples (e.g., twin primes), finding the greatest common divisor and smallest (least) common multiple, testing whether two numbers are coprime, and computing Euler's totient function. Most functions are vectorized for speed and convenience.

r-pingr 2.0.5
Propagated dependencies: r-processx@3.8.6
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://r-lib.github.io/pingr/
Licenses: Expat
Build system: r
Synopsis: Check if a Remote Computer is Up
Description:

Check if a remote computer is up. It can either just call the system ping command, or check a specified TCP port.

r-partools 1.1.7
Propagated dependencies: r-regtools@1.7.0 r-pdist@1.2.1 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/matloff/partools
Licenses: GPL 2+
Build system: r
Synopsis: Tools for the 'Parallel' Package
Description:

Miscellaneous utilities for parallelizing large computations. Alternative to MapReduce. File splitting and distributed operations such as sort and aggregate. "Software Alchemy" method for parallelizing most statistical methods, presented in N. Matloff, Parallel Computation for Data Science, Chapman and Hall, 2015. Includes a debugging aid.

r-paleodiv 0.4.6
Propagated dependencies: r-stringr@1.6.0 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=paleoDiv
Licenses: GPL 3+
Build system: r
Synopsis: Extracting and Visualizing Paleobiodiversity
Description:

This package contains various tools for conveniently downloading and editing taxon-specific datasets from the Paleobiology Database <https://paleobiodb.org>, extracting information on abundance, temporal distribution of subtaxa and taxonomic diversity through deep time, and visualizing these data in relation to phylogeny and stratigraphy.

r-permanova 0.2.0
Propagated dependencies: r-xtable@1.8-4 r-scales@1.4.0 r-matrix@1.7-4 r-mass@7.3-65 r-deldir@2.0-4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PERMANOVA
Licenses: GPL 2+
Build system: r
Synopsis: Multivariate Analysis of Variance Based on Distances and Permutations
Description:

Calculates multivariate analysis of variance based on permutations and some associated pictorial representations. The pictorial representation is based on the principal coordinates of the group means. There are some original results that will be published soon.

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Total results: 68655