FSL is a comprehensive library of analysis tools for FMRI, MRI and diffusion brain imaging data.

This meta-package provides all the FSL modules.

Eddy is a tool within FSL that corrects for eddy current distortions and head movements in diffusion MRI data.

The meshclass module in FSL provides the Mesh class for representing and manipulating 3D models made of triangles, supporting various geometric operations and querie

MCFLIRT (Motion Correction using FMRIB's Linear Image Registration Tool) is a tool within FSL designed to perform motion correction on fMRI data.

Module within FSL that provides visualization functionalities, with its source code available on GitLab.

Library within FSL for creating and analyzing shape models of brain structures, aiding in morphometric studies and neuroimaging research.

Tool within FSL for FMRIB's Local Analysis of Mixed Effects, used for higher-level analysis of fMRI data, providing robust statistical modeling.

A library that implement miscellaneous mathematicals methods.

Verbena is a Bayesian Inference tool for quantification of perfusion and other haemodynamic parameters from Dynamic Susceptibility Contrast perfusion MRI of the brain.

This package is a set of utilities libraries all FSL modules

FNIRT (FMRIB's Non-linear Image Registration Tool) is a tool for non-linear registration of brain images, used to align images from different subjects or modalities.

Module within FSL that provides advanced functionalities for FEAT (FMRI Expert Analysis Tool), including pre-processing steps, model setup, and statistical analysis for fMRI data.

Collection of miscellaneous C functions and utilities within FSL, providing various helper functions for neuroimaging analysis.

FAST4 is an automated segmentation tool in FSL that segments brain images into different tissue types and corrects for bias field inhomogeneities.

Basisfield is a tool within the FSL (FMRIB Software Library) used to model and correct B0 field inhomogeneities in MRI images, which can cause geometric distortions. It is essential for improving image quality and precision in both clinical and research applications.

libgdc is a module within FSL that provides essential graphical or data handling functionalities, with its source code available on GitLab.

A wrapper that encapsulates the CEPHES Cmath library.

Tool within FSL for FMRIB's Improved Linear Model, used for statistical analysis of fMRI data, enhancing accuracy and reliability.

FLIRT (FMRIB's Linear Image Registration Tool) is a fully automated robust and accurate tool for linear (affine) intra- and inter-modal brain image registration.

Module within FSL that facilitates input/output operations using VTK (Visualization Toolkit), enabling advanced visualization and data handling for neuroimaging.

Giftiio is a library within FSL for reading and writing GIFTI files, a format used for surface-based data representation in neuroimaging.

A library that encapsulates the reference implementation of the NIfTI format as well as the legacy code necessary to perform I/O operations on NIfTI files.

Module within FSL that provides advanced functionalities for noise reduction in MRI data using nonlinear filtering techniques.

A library that returns the object representing an image/volume once it has been deserialized by the newnifti library. The library implements a data container and common operations for nifti images/volumes