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The Penn World Table provides purchasing power parity and national income accounts converted to international prices for 189 countries for some or all of the years 1950-2010.
This package provides a user friendly way to create patient level prediction models using the Observational Medical Outcomes Partnership Common Data Model. Given a cohort of interest and an outcome of interest, the package can use data in the Common Data Model to build a large set of features. These features can then be used to fit a predictive model with a number of machine learning algorithms. This is further described in Reps (2017) <doi:10.1093/jamia/ocy032>.
Statistical power analysis for designs including t-tests, correlations, multiple regression, ANOVA, mediation, and logistic regression. Functions accompany Aberson (2019) <doi:10.4324/9781315171500>.
This package provides a PEP, or Portable Encapsulated Project, is a dataset that subscribes to the PEP structure for organizing metadata. It is written using a simple YAML + CSV format, it is your one-stop solution to metadata management across data analysis environments. This package reads this standardized project configuration structure into R. Described in Sheffield et al. (2021) <doi:10.1093/gigascience/giab077>.
Package for processing downloaded MODIS Calibrated radiances Product HDF files. Specifically, MOD02 calibrated radiance product files, and the associated MOD03 geolocation files (for MODIS-TERRA). The package will be most effective if the user installs MRTSwath (MODIS Reprojection Tool for swath products; <https://lpdaac.usgs.gov/tools/modis_reprojection_tool_swath>, and adds the directory with the MRTSwath executable to the default R PATH by editing ~/.Rprofile.
This package provides a tidyverse'-style interface to the Brazilian Central Bank (<https://www.bcb.gov.br>) PIX Open Data API <https://olinda.bcb.gov.br/olinda/servico/Pix_DadosAbertos/versao/v1/aplicacao#!/recursos>. Retrieve statistics on PIX keys, transactions by municipality, and monthly transaction summaries. All functions return tibbles and support OData query parameters for filtering, selecting, and ordering data.
This package provides functionality for calculating pregnancy-related dates and tracking medications during pregnancy and fertility treatment. Calculates due dates from various starting points including last menstrual period and IVF (In Vitro Fertilisation) transfer dates, determines pregnancy progress on any given date, and identifies when specific pregnancy weeks are reached. Includes medication tracking capabilities for individuals undergoing fertility treatment or during pregnancy, allowing users to monitor remaining doses and quantities needed over specified time periods. Designed for those tracking their own pregnancies or supporting partners through the process, making use of options to personalise output messages. For details on due date calculations, see <https://www.acog.org/clinical/clinical-guidance/committee-opinion/articles/2017/05/methods-for-estimating-the-due-date>.
This package provides functions for graph-based multiple-sample testing and visualization of microbiome data, in particular data stored in phyloseq objects. The tests are based on those described in Friedman and Rafsky (1979) <http://www.jstor.org/stable/2958919>, and the tests are described in more detail in Callahan et al. (2016) <doi:10.12688/f1000research.8986.1>.
This is a collection of data and functions for common metrics in political science research. Data measuring ideology, and functions calculating geographical diffusion and ideological diffusion - geog.diffuse() and ideo.dist(), respectively. Functions derived from methods developed in: Soule and King (2006) <doi:10.1086/499908>, Berry et al. (1998) <doi:10.2307/2991759>, Cruz-Aceves and Mallinson (2019) <doi:10.1177/0160323X20902818>, and Grossback et al. (2004) <doi:10.1177/1532673X04263801>.
The rgl implementation of plot3D functions.
Plots with high flexibility and easy handling, including informative regression diagnostics for many models.
This package implements generalized statistical point prediction and prediction intervals for future failure times under various hybrid censoring schemes. Supported censoring schemes include Type-I, Type-II, Generalized Type-I, Generalized Type-II, Unified, Progressive Type-I, and Progressive Type-II hybrid censoring schemes. Available prediction methods include Best Unbiased Predictor (BUP), Conditional Median Predictor (CMP), Maximum Likelihood Predictor (MLP), equal-tailed classical prediction intervals, Highest Conditional Density (HCD) prediction intervals, and Bayesian prediction intervals. Algorithms accept user-defined continuous probability density functions, cumulative distribution functions, quantile functions, or survival functions along with estimated parameter values. Methodological foundations are based on Balakrishnan, Cramer, and Kundu (2023, ISBN:978-0123983879), Shafay and Balakrishnan (2012) <doi:10.1080/03610918.2011.579367> for Type-I hybrid censoring, Balakrishnan and Shafay (2012) <doi:10.1080/03610926.2010.543300> for Type-II hybrid censoring, Shafay (2017) <doi:10.1080/03610926.2016.1200093> for Generalized Type-I hybrid censoring, Shafay (2016) <doi:10.1080/00949655.2015.1096361> for Generalized Type-II hybrid censoring, Mohie El-Din, Nagy, and Shafay (2017) <doi:10.18576/jsap/060113> for Unified hybrid censoring, Ebrahimi (1992) <doi:10.1109/24.126685>, Valiollahi, Asgharzadeh, and Kundu (2017) <doi:10.1214/15-BJPS302>, and Asgharzadeh, Valiollahi, and Kundu (2015) <doi:10.1080/00949655.2013.848451>.
Computes power and level tables for goodness-of-fit tests for the normal, Laplace, and uniform distributions. Generates output in LaTeX format to facilitate reporting and reproducibility. Explanatory graphs help visualize the statistical power of test statistics under various alternatives. For more details, see Lafaye De Micheaux and Tran (2016) <doi:10.18637/jss.v069.i03>.
This package provides functions for bootstrapping the power of ANOVA designs based on estimated means and standard deviations of the conditions. Please refer to the documentation of the boot.power.anova() function for further details.
Plot marginal effects for interactions estimated from linear models.
Recursive construction of balanced incomplete block designs (BIBDs), their successive generations, resolvable BIBDs (RBIBDs) and associated uniform designs (UDs), derived from finite projective geometries PG(m, p) over a Galois field GF(p) of any prime order p. Implements and generalises the method of Boudraa, Gheribi-Aoulmi and Laib (2013, International Journal of Research and Reviews in Applied Sciences, 17(2), 167-176), which was previously available only for p = 2, and the uniform design constructions of Fang et al. (2004) <doi:10.1016/S0012-365X(03)00100-6>. Designs of every recursion stage can be extracted, and all constructions are validated against the parameters published in the original paper.
Portfolio optimization and analysis routines and graphics.
This package provides an updated database of accepted endemic plant taxa from Peru. The current collection contains over 8,000 taxonomic records at species and infraspecific ranks. Data are derived from Govaerts, R., Nic Lughadha, E., Black, N. et al., The World Checklist of Vascular Plants: A continuously updated resource for exploring global plant diversity', published in Sci Data 8, 215 (2021) <doi:10.1038/s41597-021-00997-6>.
Prepares groundwater-level observations from measured hydraulic head or from depth-to-water and land-surface elevation, interpolates potentiometric surfaces using thin-plate splines, inverse-distance weighting, ordinary Kriging, universal Kriging, or user-supplied methods, and creates raster, contour, diagnostic, support, and hydraulic-gradient products for review and export. Functions retain method conditions and fit diagnostics, validate explicit prediction tasks, inspect model-conditional uncertainty and monitoring-network sensitivity, identify limited prediction support, and check whether scaled hydraulic-gradient arrows remain within finite raster support and end at lower modeled head. Raster processing uses methods from terra (Hijmans 2025) <doi:10.32614/CRAN.package.terra>, thin-plate splines use methods from fields (Nychka et al. 2021) <doi:10.5065/D6W957CT>, and geostatistical interpolation uses methods from gstat (Pebesma 2004) <doi:10.1016/j.cageo.2004.03.012>.
Set of functions to polish content for Microsoft Word and PowerPoint into OOXML'. Polishing is the conversion of the R object into an OOXML representation of the object that can then be added to Word or PowerPoint files.
Prepares data for statistical analysis (e.g., analysis of variance ;ANOVA) by enabling the user to easily and quickly merge (using the file_merge() function) raw data files into one merged table and then aggregate the merged table (using the prep() function) into a finalized table while keeping track and summarizing every step of the preparation. The finalized table contains several possibilities for dependent measures of the dependent variable. Most suitable when measuring variables in an interval or ratio scale (e.g., reaction-times) and/or discrete values such as accuracy. Main functions included are file_merge() and prep(). The file_merge() function vertically merges individual data files (in a long format) in which each line is a single observation to one single dataset. The prep() function aggregates the single dataset according to any combination of grouping variables (i.e., between-subjects and within-subjects independent variables, respectively), and returns a data frame with a number of dependent measures for further analysis for each cell according to the combination of provided grouping variables. Dependent measures for each cell include among others means before and after rejecting all values according to a flexible standard deviation criteria, number of rejected values according to the flexible standard deviation criteria, proportions of rejected values according to the flexible standard deviation criteria, number of values before rejection, means after rejecting values according to procedures described in Van Selst & Jolicoeur (1994; suitable when measuring reaction-times), standard deviations, medians, means according to any percentile (e.g., 0.05, 0.25, 0.75, 0.95) and harmonic means. The data frame prep() returns can also be exported as a txt file to be used for statistical analysis in other statistical programs.
This package provides functionality for the prior and posterior projected Polya tree for the analysis of circular data (Nieto-Barajas and Nunez-Antonio (2019) <arXiv:1902.06020>).
Set the R prompt dynamically, from a function. The package contains some examples to include various useful dynamic information in the prompt: the status of the last command (success or failure); the amount of memory allocated by the current R process; the name of the R package(s) loaded by pkgload and/or devtools'; various git information: the name of the active branch, whether it is dirty, if it needs pushes pulls. You can also create your own prompt if you don't like the predefined examples.
This package implements (1) panel cointegration rank tests, (2) estimators for panel vector autoregressive (VAR) models, and (3) identification methods for panel structural vector autoregressive (SVAR) models as described in the accompanying vignette. The implemented functions allow to account for cross-sectional dependence and for structural breaks in the deterministic terms of the VAR processes. Among the large set of functions, particularly noteworthy are those that implement (1) the correlation-augmented inverse normal test on the cointegration rank by Arsova and Oersal (2021, <doi:10.1016/j.ecosta.2020.05.002>), (2) the two-step estimator for pooled cointegrating vectors by Breitung (2005, <doi:10.1081/ETC-200067895>), and (3) the pooled identification based on independent component analysis by Herwartz and Wang (2024, <doi:10.1002/jae.3044>).