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Display a randomly selected quote about Richard M. Stallman based on the collection in the GNU Octave function fact() which was aggregated by Jordi Gutiérrez Hermoso based on the (now defunct) site stallmanfacts.com (which is accessible only via <http://archive.org>).
This package implements the "Stemming Algorithm for the Portuguese Language" <DOI:10.1109/SPIRE.2001.10024>.
This package performs goodness-of-fit tests for capture-recapture models as described by Gimenez et al. (2018) <doi:10.1111/2041-210X.13014>. Also contains several functions to process capture-recapture data.
This package implements various Riemannian metrics for symmetric positive definite matrices, including AIRM (Affine Invariant Riemannian Metric, <doi:10.1007/s11263-005-3222-z>), Log-Euclidean (<doi:10.1002/mrm.20965>), Euclidean, Log-Cholesky (<doi:10.1137/18M1221084>), and Bures-Wasserstein metrics (<doi:10.1016/j.exmath.2018.01.002>). Provides functions for computing logarithmic and exponential maps, vectorization, and statistical operations on the manifold of positive definite matrices.
Test for effects of both individual factors and their interaction on replicated spatial patterns in a two factorial design, as explained in Ramon et al. (2016) <doi:10.1111/ecog.01848>.
Plots multiple run charts, finds successive signals of improvement, and revises medians when each signal occurs. Finds runs above, below, or on both sides of the median, and returns a plot and a data.table summarising original medians and any revisions, for all groups within the supplied data.
Show physics, math and engineering students how an ODE solver is made and how effective R classes can be for the construction of the equations that describe natural phenomena. Inspiration for this work comes from the book on "Computer Simulations in Physics" by Harvey Gould, Jan Tobochnik, and Wolfgang Christian. Book link: <http://www.compadre.org/osp/items/detail.cfm?ID=7375>.
This package provides a tidy interface to the COROS Training Hub API (<https://coros.com/traininghub>), the web platform that accompanies COROS GPS sports watches. Retrieves activities, daily wellness metrics (heart rate variability, resting heart rate, VO2 max and training load), workout programmes and training calendars. All results are returned as tibbles, ready for analysis with dplyr and ggplot2'. Both the US and EU regional endpoints are supported.
Additional matrix functionality for R including: (1) wrappers for the base matrix function that allow matrices to be created from character strings and lists (the former is especially useful for creating block matrices), (2) better printing of large matrices via the generic "pretty" print function, and (3) a number of convenience functions for users more familiar with other scientific languages like Julia', Matlab'/'Octave', or Python'+'NumPy'.
Learning modules for reliability analysis including modules for Reliability, Availability, and Maintainability (RAM) Analysis, Life Data Analysis, Reliability Testing, Repairable Systems Analysis, and Reliability Block Diagrams.
Wrapper and plotting utilities for the spatial population genetics tool EEMS (Estimated Effective Migration Surfaces) for SNP (Single Nucleotide Polymorphism) data, originally provided as a command-line tool written in C++ together with an accompanying R package for plotting the output of the EEMS tool itself (<https://github.com/dipetkov/eems/>). There are four main motivations for offering this to R users as a package. Firstly, to remove the installation and configuration burden for the EEMS command-line tool, which relies on manually installed Boost and Eigen system libraries and configuring their location; secondly, to streamline the workflow by having a singe environment (the R system) for the entire analysis rather than a file-based command-line executable whose output files are then to be imported and analysed by a separate R script; thirdly, to make the input formats compatible with other, R'-based spatial population genetics tools such as the ConStruct package; and lastly, to allow for easily running several chains in parallel and combining them for plotting and further analysis. The package also adds more intuitive, streamlined tooling around creating more complex habitats. The method of estimating effective migration surfaces was first described by Petkova, D., Novembre, J. & Stephens, M. (2016) <doi:10.1038/ng.3464>.
This package provides a toolkit for the analysis of paths from spatial tracking experiments and calculation of goal-finding strategies. This package is centered on an approach using machine learning for path classification.
This package provides a collection of implementations of semi-supervised classifiers and methods to evaluate their performance. The package includes implementations of, among others, Implicitly Constrained Learning, Moment Constrained Learning, the Transductive SVM, Manifold regularization, Maximum Contrastive Pessimistic Likelihood estimation, S4VM and WellSVM.
An R interface to estimate structured additive regression (STAR) models with BayesX'.
Feasible multivariate GARCH models including DCC, GO-GARCH and Copula-GARCH.
Updates values within csv format data files using a custom, User-built csv format lookup file. Based on data.table package.
Implemented are an ANOVA-type test statistic for testing hypotheses formulated in Mann-Whitney-type effects in nonparametric factorial designs. Statistical inference is based on a wild or a sample-specific bootstrap approach as described in Dobler et al. (2019) <doi:10.1007/s10463-019-00717-3>'. The unweighted treatment effects considered do not depend on sample sizes and allow for transitive ordering. The package thus provides an extension of the univariate rankFD package to multivariate data.
Designed to create and display complex tables with R, the rtables R package allows cells in an rtables object to contain any high-dimensional data structure, which can then be displayed with cell-specific formatting instructions. Additionally, the rtables.officer package supports export formats related to the Microsoft Office software suite, including Microsoft Word ('docx') and Microsoft PowerPoint ('pptx').
This package provides an R interface to the RCSB Protein Data Bank ('PDB') Search and Data APIs (<https://www.rcsb.org/>). Supports full-text, attribute, sequence, motif, structure, and chemical searches; retrieval of entry-, assembly-, polymer-entity-, and chemical-component-level metadata; and conversion of API responses into analysis-ready tables and typed R objects for reproducible structural bioinformatics workflows.
Data for the examples and exercises in the book "R by Example". Jim Albert and Maria Rizzo (2012, ISBN 978-1-4614-1365-3).
Interoperability between Rcpp and the C++11 array and tuple types. Linking to this package allows fixed-length std::array objects to be converted to and from equivalent R vectors, and std::tuple objects converted to lists, via the as() and wrap() functions. There is also experimental support for std::span from C++20'.
An R interface to the SYMPHONY solver for mixed-integer linear programs.
An implementation of the WOFOST ("World Food Studies") crop growth model. WOFOST is a dynamic simulation model that uses daily weather data, and crop, soil and management parameters to simulate crop growth and development. See De Wit et al. (2019) <doi:10.1016/j.agsy.2018.06.018> for a recent review of the history and use of the model.
Calculate representativity indicators for survey quality based on survey data and response models. Use partial indicators to analyse the impact of individual variables and categories. Monitor changes in representativity during data collection. Improve representativity through adaptive survey design. Supports both R-indicators and coefficients of variation. See also Schouten, Cobben, Bethlehem (2009) <https://api.semanticscholar.org/CorpusID:33654901>, Shlomo, Skinner, Schouten (2012) <doi:10.1016/j.jspi.2011.07.008> and Schouten, Shlomo (2017) <doi:10.1111/insr.12159>.