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This comprehensive toolkit for Distributed Elliptical model is designated as "ELIC" (The LIC for Distributed Elliptical Model Analysis) analysis. It is predicated on the assumption that the error term adheres to a Elliptical distribution. The philosophy of the package is described in Guo G. (2020) <doi:10.1080/02664763.2022.2053949>.
Extends the Changes-in-Changes model a la Athey and Imbens (2006) <doi:10.1111/j.1468-0262.2006.00668.x> to multiple cohorts and time periods, which generalizes difference-in-differences estimation techniques to the entire distribution. Computes quantile treatment effects for every possible two-by-two combination in ecic(). Then, aggregating all bootstrap runs adds the standard errors in summary_ecic(). Results can be plotted with plot_ecic() aggregated over all cohort-group combinations or in an event-study style for either individual periods or individual quantiles.
Work with Ecological Metadata Language ('EML') files. EML is a widely used metadata standard in the ecological and environmental sciences, described in Jones et al. (2006), <doi:10.1146/annurev.ecolsys.37.091305.110031>.
Randomized multiple-select and single-select question generation for the MyLearn teaching and learning platform. Question templates in the form of the R/exams package (see <http://www.r-exams.org/>) are transformed into XML format required by MyLearn'.
This package contains data about emojis with relevant metadata, and functions to work with emojis when they are in strings.
The purpose of this package is to estimate the potential of urban agriculture to contribute to addressing several urban challenges at the city-scale. Within this aim, we selected 8 indicators directly related to one or several urban challenges. Also, a function is provided to compute new scenarios of urban agriculture. Methods are described by Pueyo-Ros, Comas & Corominas (2023) <doi:10.12688/openreseurope.16054.1>.
This package provides a simple interface to search and retrieve scientific articles from the SciELO (Scientific Electronic Library Online) database <https://scielo.org>. It allows querying, filtering, and visualizing results in an interactive table.
Build experience life tables.
The cointegration based support vector regression model enables researchers to use data obtained from the cointegrating vector as input in the support vector regression model.
Treatments of a one-way layout, being equivalent to a control, can be selected with this package. Bonferroni adjusted "two one-sided t-tests" (TOST) and related simultaneous confidence intervals are given for both differences or ratios of means of normally distributed data. For the case of equal variances and balanced sample sizes for the treatment groups, the single-step procedure of Bofinger and Bofinger (1995) <doi:10.1111/j.2517-6161.1995.tb02058.x> can be chosen. For non-normal data, the Wilcoxon test is applied.
Constructs a shiny app function with interactive displays for summary and analysis of variance regression tables, and parallel coordinate plots of data and residuals.
This package provides a wrapper of different methods from Linear Algebra for the equations introduced in The Atlas of Economic Complexity and related literature. This package provides standard matrix and graph output that can be used seamlessly with other packages. See <doi:10.21105/joss.01866> for a summary of these methods and its evolution in literature.
Conduct one- and two-sample goodness-of-fit tests for univariate data. In the one-sample case, normal, uniform, exponential, Bernoulli, binomial, geometric, beta, Poisson, lognormal, Laplace, asymmetric Laplace, inverse Gaussian, half-normal, chi-squared, gamma, F, Weibull, Cauchy, and Pareto distributions are supported. egof.test() can also test goodness-of-fit to any distribution with a continuous distribution function. A subset of the available distributions can be tested for the composite goodness-of-fit hypothesis, that is, one can test for distribution fit with unknown parameters. P-values are calculated via parametric bootstrap.
This package provides a predictable and pipeable framework for performing ETL (extract-transform-load) operations on publicly-accessible medium-sized data set. This package sets up the method structure and implements generic functions. Packages that depend on this package download specific data sets from the Internet, clean them up, and import them into a local or remote relational database management system.
This package provides a complete rewrite and reimagining of bakR (see Vock et al. (2025) <doi:10.1371/journal.pcbi.1013179>). Designed to support a wide array of analyses of nucleotide recoding RNA-seq (NR-seq) datasets of any type, including TimeLapse-seq/SLAM-seq/TUC-seq, Start-TimeLapse-seq (STL-seq), TT-TimeLapse-seq (TT-TL-seq), and subcellular NR-seq. EZbakR extends standard NR-seq standard NR-seq mutational modeling to support multi-label analyses (e.g., 4sU and 6sG dual labeling), and implements an improved hierarchical model to better account for transcript-to-transcript variance in metabolic label incorporation. EZbakR also generalized dynamical systems modeling of NR-seq data to support analyses of premature mRNA processing and flow between subcellular compartments. Finally, EZbakR implements flexible and well-powered comparative analyses of all estimated parameters via design matrix-specified generalized linear modeling.
Environmental seismology is a scientific field that studies the seismic signals, emitted by Earth surface processes. This package provides all relevant functions to read/write seismic data files, prepare, analyse and visualise seismic data, and generate reports of the processing history.
This package provides classes and methods for implementing aquatic ecosystem models, for running these models, and for visualizing their results.
This SVG elements generator can easily generate SVG elements such as rect, line, circle, ellipse, polygon, polyline, text and group. Also, it can combine and output SVG elements into a SVG file.
It allows structuring electoral data of different size and structure to calculate various indicators frequently used in the studies of electoral systems and party systems. Indicators of electoral volatility, electoral disproportionality, party nationalization and the effective number of parties are included.
This package provides statistical and visualization tools for the analysis of demographic indicators, and spatio-temporal behavior and characterization of outbreaks of vector-borne diseases (VBDs) in Colombia. It implements travel times estimated in Bravo-Vega C., Santos-Vega M., & Cordovez J.M. (2022), and the endemic channel method (Bortman, M. (1999) <https://iris.paho.org/handle/10665.2/8562>).
Calculates conditional exact tests (Fisher's exact test, Blaker's exact test, or exact McNemar's test) and unconditional exact tests (including score-based tests on differences in proportions, ratios of proportions, and odds ratios, and Boshcloo's test) with appropriate matching confidence intervals, and provides power and sample size calculations. Gives melded confidence intervals for the binomial case (Fay, et al, 2015, <DOI:10.1111/biom.12231>). Gives boundary-optimized rejection region test (Gabriel, et al, 2018, <DOI:10.1002/sim.7579>), an unconditional exact test for the situation where the controls are all expected to fail. Gives confidence intervals compatible with exact McNemar's or sign tests (Fay and Lumbard, 2021, <DOI:10.1002/sim.8829>). For review of these kinds of exact tests see Fay and Hunsberger (2021, <DOI:10.1214/21-SS131>).
This package provides functions for the Bayesian analysis of extreme value models, using Markov chain Monte Carlo methods. Allows the construction of both uninformative and informed prior distributions for common statistical models applied to extreme event data, including the generalized extreme value distribution.
The EXPOS model uses a digital elevation model (DEM) to estimate exposed and protected areas for a given hurricane wind direction and inflection angle. The resulting topographic exposure maps can be combined with output from the HURRECON model to estimate hurricane wind damage across a region. For details on the original version of the EXPOS model written in Borland Pascal', see: Boose, Foster, and Fluet (1994) <doi:10.2307/2937142>, Boose, Chamberlin, and Foster (2001) <doi:10.1890/0012-9615(2001)071[0027:LARIOH]2.0.CO;2>, and Boose, Serrano, and Foster (2004) <doi:10.1890/02-4057>.
This package provides a principled framework for sampling Virtual Control Group (VCG) using energy distance-based covariate balancing. The package offers visualization tools to assess covariate balance and includes a permutation test to evaluate the statistical significance of observed deviations.