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First, we provide functions to calculate the partial derivative of the first-passage time diffusion probability density function (PDF) and cumulative distribution function (CDF) with respect to the first-passage time t (only for PDF), the upper barrier a, the drift rate v, the relative starting point w, the non-decision time t0, the inter-trial variability of the drift rate sv, the inter-trial variability of the rel. starting point sw, and the inter-trial variability of the non-decision time st0. In addition the PDF and CDF themselves are also provided. Most calculations are done on the logarithmic scale to make it more stable. Since the PDF, CDF, and their derivatives are represented as infinite series, we give the user the option to control the approximation errors with the argument precision'. For the numerical integration we used the C library cubature by Johnson, S. G. (2005-2013) <https://github.com/stevengj/cubature>. Numerical integration is required whenever sv, sw, and/or st0 is not zero. Note that numerical integration reduces speed of the computation and the precision cannot be guaranteed anymore. Therefore, whenever numerical integration is used an estimate of the approximation error is provided in the output list. Note: The large number of contributors (ctb) is due to copying a lot of C/C++ code chunks from the GNU Scientific Library (GSL). Second, we provide methods to sample from the first-passage time distribution with or without user-defined truncation from above. The first method is a new adaptive rejection sampler building on the works of Gilks and Wild (1992; <doi:10.2307/2347565>) and Hartmann and Klauer (in press). The second method is a rejection sampler provided by Drugowitsch (2016; <doi:10.1038/srep20490>). The third method is an inverse transformation sampler. The fourth method is a "pseudo" adaptive rejection sampler that builds on the first method. For more details see the corresponding help files.
Evaluation of alternatives based on multiple criteria using weighted technique for Order preference by similarity to an ideal solution method. Reference: Hwang CL. (1981, ISBN:978-3-540-10558-9).
The main aim of this package is to combine the advantage of wavelet and support vector machine models for time series forecasting. This package also gives the accuracy measurements in terms of RMSE and MAPE. This package fits the hybrid Wavelet SVR model for time series forecasting The main aim of this package is to combine the advantage of wavelet and Support Vector Regression (SVR) models for time series forecasting. This package also gives the accuracy measurements in terms of Root Mean Square Error (RMSE) and Mean Absolute Prediction Error (MAPE). This package is based on the algorithm of Raimundo and Okamoto (2018) <DOI: 10.1109/INFOCT.2018.8356851>.
This package contains functions for computing and plotting discrete wavelet transforms (DWT) and maximal overlap discrete wavelet transforms (MODWT), as well as their inverses. Additionally, it contains functionality for computing and plotting wavelet transform filters that are used in the above decompositions as well as multiresolution analyses.
The outcome of various rehabilitation strategies for water distribution systems can be modeled with the Water Management Simulator (WaMaSim). Pipe breaks and the corresponding damage and rehabilitation costs are simulated. It is mainly intended to be used as educational tool for the Water Infrastructure Experimental and Computer Laboratory at ETH Zurich, Switzerland.
Access Wikipedia through the several MediaWiki APIs (<https://www.mediawiki.org/wiki/API>), as well as through the XTools API (<https://www.mediawiki.org/wiki/XTools/API>). Ensure your API calls are correct, and receive results in tidy tibbles.
This package provides a wrapper around Michel Scheffers's libassp (<https://libassp.sourceforge.net/>). The libassp (Advanced Speech Signal Processor) library aims at providing functionality for handling speech signal files in most common audio formats and for performing analyses common in phonetic science/speech science. This includes the calculation of formants, fundamental frequency, root mean square, auto correlation, a variety of spectral analyses, zero crossing rate, filtering etc. This wrapper provides R with a large subset of libassp's signal processing functions and provides them to the user in a (hopefully) user-friendly manner.
This package provides a collection of functions related to novel methods for estimating R(t), created by the lab of Professor Laura White. Currently implemented methods include two-step Bayesian back-calculation and now-casting for line-list data with missing reporting delays, adapted in STAN from Li (2021) <doi:10.1371/journal.pcbi.1009210>, and calculation of time-varying reproduction number assuming a flux between various adjacent states, adapted into STAN from Zhou (2021) <doi:10.1371/journal.pcbi.1010434>.
This package implements the 2019 World Health Organization (WHO) cardiovascular disease (CVD) risk prediction models, as described in Kaptoge et al. (2019) <doi:10.1016/S2214-109X(19)30318-3>. Provides two validated models for estimating 10-year risk of fatal and non-fatal cardiovascular events (myocardial infarction and stroke): a laboratory-based model using age, sex, systolic blood pressure, total cholesterol, smoking status, and diabetes history; and a non-laboratory-based model substituting body mass index (BMI) for cholesterol and diabetes, suitable for resource-limited settings. Risk estimates are recalibrated to 21 Global Burden of Disease regions using region-specific incidence rates and risk factor distributions derived from the Emerging Risk Factors Collaboration. Functions are fully vectorized for efficient batch calculations and support automatic country-to-region mapping via ISO 3166-1 alpha-3 country codes.
This package provides a fast visualization tool for creating wordcloud by using wordcloud2.js'. wordcloud2.js is a JavaScript library to create wordle presentation on 2D canvas or HTML <https://timdream.org/wordcloud2.js/>.
This package implements Weighted-Average Least Squares model averaging for negative binomial regression models of Huynh (2024) <doi:10.48550/arXiv.2404.11324>, generalized linear models of De Luca, Magnus, Peracchi (2018) <doi:10.1016/j.jeconom.2017.12.007> and linear regression models of Magnus, Powell, Pruefer (2010) <doi:10.1016/j.jeconom.2009.07.004>, see also Magnus, De Luca (2016) <doi:10.1111/joes.12094>. Weighted-Average Least Squares for the linear regression model is based on the original MATLAB code by Magnus and De Luca <https://www.janmagnus.nl/items/WALS.pdf>, see also Kumar, Magnus (2013) <doi:10.1007/s13571-013-0060-9> and De Luca, Magnus (2011) <doi:10.1177/1536867X1201100402>.
This package provides Water Year Hydrologic Classification Indices based on measured unimpaired runoff (in million acre-feet). Data is provided by California Department of Water Resources and subject to revision.
Calculates the water balance of starch potatoes from Normalized Distance Vegetation Index (NDVI) images, German Weather Service (DWD) reference evapotranspiration, German Weather Service RADOLAN precipitation data and irrigation information. For more details see Piernicke et al. (2025) <doi:10.3390/rs17183227>.
Convert, validate, format and elegantly print geographic coordinates and waypoints (paired latitude and longitude values) in decimal degrees, degrees and minutes, and degrees, minutes and seconds using high performance C++ code to enable rapid conversion and formatting of large coordinate and waypoint datasets.
Use the what3words API <https://developer.what3words.com/public-api> to return three words which uniquely identify every 3m x 3m square on Earth. It is also possible to return coordinates from any valid three words location. Supports multiple languages.
This package provides functions to convert between weather metrics, including conversions for metrics of temperature, air moisture, wind speed, and precipitation. This package also includes functions to calculate the heat index from air temperature and air moisture.
Non- and semiparametric regression for generalized additive, partial linear, and varying coefficient models as well as their combinations via smoothed backfitting. Based on Roca-Pardinas J and Sperlich S (2010) <doi:10.1007/s11222-009-9130-2>; Mammen E, Linton O and Nielsen J (1999) <doi:10.1214/aos/1017939138>; Lee YK, Mammen E, Park BU (2012) <doi:10.1214/12-AOS1026>.
Clusters state sequences and weighted data. It provides an optimized weighted PAM algorithm as well as functions for aggregating replicated cases, computing cluster quality measures for a range of clustering solutions, sequence analysis typology validation using parametric bootstraps and plotting (fuzzy) clusters of state sequences. It further provides a fuzzy and crisp CLARA algorithm to cluster large database with sequence analysis, and a methodological framework for Robustness Assessment of Regressions using Cluster Analysis Typologies (RARCAT).
Estimate and plot wavelet quantile correlations(Kumar and Padakandla,2022) between two time series. Wavelet quantile correlation is used to capture the dependency between two time series across quantiles and different frequencies. This method is useful in identifying potential hedges and safe-haven instruments for investment purposes. See Kumar and Padakandla(2022) <doi:10.1016/j.frl.2022.102707> for further details.
This package provides statistical methods and visualizations that are often used in reliability engineering. Comprises a compact and easily accessible set of methods and visualization tools that make the examination and adjustment as well as the analysis and interpretation of field data (and bench tests) as simple as possible. Non-parametric estimators like Median Ranks, Kaplan-Meier (Abernethy, 2006, <ISBN:978-0-9653062-3-2>), Johnson (Johnson, 1964, <ISBN:978-0444403223>), and Nelson-Aalen for failure probability estimation within samples that contain failures as well as censored data are included. The package supports methods like Maximum Likelihood and Rank Regression, (Genschel and Meeker, 2010, <DOI:10.1080/08982112.2010.503447>) for the estimation of multiple parametric lifetime distributions, as well as the computation of confidence intervals of quantiles and probabilities using the delta method related to Fisher's confidence intervals (Meeker and Escobar, 1998, <ISBN:9780471673279>) and the beta-binomial confidence bounds. If desired, mixture model analysis can be done with segmented regression and the EM algorithm. Besides the well-known Weibull analysis, the package also contains Monte Carlo methods for the correction and completion of imprecisely recorded or unknown lifetime characteristics. (Verband der Automobilindustrie e.V. (VDA), 2016, <ISSN:0943-9412>). Plots are created statically ('ggplot2') or interactively ('plotly') and can be customized with functions of the respective visualization package. The graphical technique of probability plotting as well as the addition of regression lines and confidence bounds to existing plots are supported.
The web version WebGestalt <https://www.webgestalt.org> supports 12 organisms, 354 gene identifiers and 321,251 function categories. Users can upload the data and functional categories with their own gene identifiers. In addition to the Over-Representation Analysis, WebGestalt also supports Gene Set Enrichment Analysis and Network Topology Analysis. The user-friendly output report allows interactive and efficient exploration of enrichment results. The WebGestaltR package not only supports all above functions but also can be integrated into other pipeline or simultaneously analyze multiple gene lists.
This package provides data from the United Nation's World Population Prospects 2019.
Organizational framework for web development in R including functions to serve static and dynamic content via HTTP methods, includes the html5 package to create HTML pages, and offers other utility functions for common tasks related to web development.
This package provides functions to create factor variables with contrasts based on weighted effect coding, and their interactions. In weighted effect coding the estimates from a first order regression model show the deviations per group from the sample mean. This is especially useful when a researcher has no directional hypotheses and uses a sample from a population in which the number of observation per group is different.