The pyparsing module is an alternative approach to creating and executing simple grammars, vs. the traditional lex/yacc approach, or the use of regular expressions. The pyparsing module provides a library of classes that client code uses to construct the grammar directly in Python code.

Setuptools_scm handles managing your Python package versions in software configuration management (SCM) metadata instead of declaring them as the version argument or in a SCM managed file.

This package provides an implementation of importlib.resources for older versions of Python.

This package is a backport of the functools module from Python 3.2.3 for use with older versions of Python and PyPy.

Pluggy is an extraction of the plugin manager as used by Pytest but stripped of Pytest specific details.

Coverage measures code coverage, typically during test execution. It uses the code analysis tools and tracing hooks provided in the Python standard library to determine which lines are executable, and which have been executed.

NumPy is the fundamental package for scientific computing with Python. It contains among other things: a powerful N-dimensional array object, sophisticated (broadcasting) functions, tools for integrating C/C++ and Fortran code, useful linear algebra, Fourier transform, and random number capabilities.

python2-backports-functools-lru-cache is a backport of functools.lru_cache from Python 3.3.

importlib_metadata is a library which provides an API for accessing an installed Python package's metadata, such as its entry points or its top-level name. This functionality intends to replace most uses of pkg_resources entry point API and metadata API. Along with importlib.resources in Python 3.7 and newer, this can eliminate the need to use the older and less efficient pkg_resources package.

Pluggy is an extraction of the plugin manager as used by Pytest but stripped of Pytest specific details.

Soup Sieve is a CSS selector library designed to be used with Beautiful Soup 4. It aims to provide selecting, matching, and filtering using modern CSS selectors. Soup Sieve currently provides selectors from the CSS level 1 specifications up through the latest CSS level 4 drafts and beyond (though some are not yet implemented).

Pytest is a testing tool that provides auto-discovery of test modules and functions, detailed info on failing assert statements, modular fixtures, and many external plugins.

Pandas is a Python package providing fast, flexible, and expressive data structures designed to make working with structured (tabular, multidimensional, potentially heterogeneous) and time series data both easy and intuitive. It aims to be the fundamental high-level building block for doing practical, real world data analysis in Python.

Pytest-cov produces coverage reports. It supports centralised testing and distributed testing in both load and each modes. It also supports coverage of subprocesses.

This module is primarily a backport of the Python 3.2 contextlib to earlier Python versions. Like contextlib, it provides utilities for common tasks involving decorators and context managers. It also contains additional features that are not part of the standard library.

Cython is an optimising static compiler for both the Python programming language and the extended Cython programming language. It makes writing C extensions for Python as easy as Python itself.

Enum34 is the new Python stdlib enum module available in Python 3.4 backported for previous versions of Python from 2.4 to 3.3.

ScientificPython is a collection of Python modules that are useful for scientific computing. Most modules are rather general (Geometry, physical units, automatic derivatives, ...) whereas others are more domain-specific (e.g. netCDF and PDB support). The library is currently not actively maintained and works only with Python 2 and NumPy < 1.9.

Pysam is a Python module for reading and manipulating files in the SAM/BAM format. Pysam is a lightweight wrapper of the SAMtools C API. It also includes an interface for tabix.

importlib_metadata is a library which provides an API for accessing an installed Python package's metadata, such as its entry points or its top-level name. This functionality intends to replace most uses of pkg_resources entry point API and metadata API. Along with importlib.resources in Python 3.7 and newer, this can eliminate the need to use the older and less efficient pkg_resources package.

Python bindings for GLib, GObject, and GIO.

Pyro is a Distributed Object Technology system written in Python that is designed to be easy to use. It resembles Java's Remote Method Invocation (RMI). It has less similarity to CORBA, which is a system and language independent Distributed Object Technology and has much more to offer than Pyro or RMI. Pyro 3.x is no longer maintained. New projects should use Pyro4 instead, which is the new Pyro version that is actively developed.

The goal of pathlib2 is to provide a backport of standard pathlib module which tracks the standard library module, so all the newest features of the standard pathlib can be used also on older Python versions.

Pathlib offers a set of classes to handle file system paths. It offers the following advantages over using string objects:

1. No more cumbersome use of os and os.path functions. Everything can be done easily through operators, attribute accesses, and method calls.

2. Embodies the semantics of different path types. For example, comparing Windows paths ignores casing.

3. Well-defined semantics, eliminating any inconsistencies or ambiguities (forward vs. backward slashes, etc.).

Thin-wrapper around the mock package for easier use with pytest