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This package provides functions to convert R objects into JSON objects and vice-versa.
This package provides auxiliary functions and data sets for "Ecological Models and Data", a book presenting maximum likelihood estimation and related topics for ecologists (ISBN 978-0-691-12522-0).
This package contains a number of common astronomy conversion routines, particularly the HMS and degrees schemes, which can be fiddly to convert between on mass due to the textural nature of the former. It allows users to coordinate match datasets quickly. It also contains functions for various cosmological calculations.
This package provides the exponential integrals E_1(x), E_2(x), E_n(x) and Ei(x), and the incomplete gamma function G(a, x) defined for negative values of its first argument. The package also gives easy access to the underlying C routines through an API; see the package vignette for details.
This package implements the Python leidenalg module to be called in R. It enables clustering using the Leiden algorithm for partitioning a graph into communities. See also Traag et al (2018) "From Louvain to Leiden: guaranteeing well-connected communities." <arXiv:1810.08473>.
ExtRemes is a suite of functions for carrying out analyses on the extreme values of a process of interest; be they block maxima over long blocks or excesses over a high threshold.
This package provides miscellaneous functions for training and plotting classification and regression models.
This package provides an interface to Amazon Web Services customer engagement services, including Simple Email Service, Connect contact center service, and more.
Multiple imputation using Fully Conditional Specification (FCS) implemented by the MICE algorithm as described in http://doi.org/10.18637/jss.v045.i03. Each variable has its own imputation model. Built-in imputation models are provided for continuous data (predictive mean matching, normal), binary data (logistic regression), unordered categorical data (polytomous logistic regression) and ordered categorical data (proportional odds). MICE can also impute continuous two-level data (normal model, pan, second-level variables). Passive imputation can be used to maintain consistency between variables. Various diagnostic plots are available to inspect the quality of the imputations.
Tools to clean and process text. Tools are geared at checking for substrings that are not optimal for analysis and replacing or removing them (normalizing) with more analysis friendly substrings (see Sproat, Black, Chen, Kumar, Ostendorf, & Richards (2001) doi:10.1006/csla.2001.0169) or extracting them into new variables. For example, emoticons are often used in text but not always easily handled by analysis algorithms. The replace_emoticon() function replaces emoticons with word equivalents.
This package provides functions and scripts used in the book "Chemometrics with R - Multivariate Data Analysis in the Natural Sciences and Life Sciences" by Ron Wehrens, Springer (2011).
This package provides various R programming tools for data manipulation, including:
medical unit conversions
combining objects
character vector operations
factor manipulation
obtaining information about R objects
generating fixed-width format files
extricating components of date and time objects
operations on columns of data frames
matrix operations
operations on vectors and data frames
value of last evaluated expression
wrapper for
samplethat ensures consistent behavior for both scalar and vector arguments
The brew package implements a templating framework for mixing text and R code for report generation. The template syntax is similar to PHP, Ruby's erb module, Java Server Pages, and Python's psp module.
This package provides tooling to group dates by a variety of periods including: yearly, monthly, by second, by week of the month, and more. The groups are defined in such a way that they also represent the distance between dates in terms of the period. This extracts valuable information that can be used in further calculations that rely on a specific temporal spacing between observations.
This package performs complex string operations compactly and efficiently. It supports string interpolation jointly with over 50 string operations. It also enhances regular string functions (like grep() and co).
This package provides a collection of efficient, vectorized algorithms for the creation and investigation of magic squares and hypercubes, including a variety of functions for the manipulation and analysis of arbitrarily dimensioned arrays.
This package provides a collection of functions to visualize spatial data and models on top of static maps from various online sources (e.g Google Maps and Stamen Maps). It includes tools common to those tasks, including functions for geolocation and routing.
This is a package for parallel computing with a network of local and remote workers. It enables fast exchange of results between the workers through a Redis database. Key features include task queues, local caching, and sophisticated error handling.
This package provides fast algorithms for the Theil-Sen estimator, Siegel's repeated median slope estimator, and Passing-Bablok regression. The implementation is based on algorithms by Dillencourt et al. (1992) <doi:10.1142/S0218195992000020> and Matousek et al. (1998) <doi:10.1007/PL00009190>. The implementations are detailed in Raymaekers (2023) <doi:10.32614/RJ-2023-012> and Raymaekers J., Dufey F. (2022) <arXiv:2202.08060>. All algorithms run in quasilinear time.
Tools for working with and comparing sets of points and intervals.
This package provides methods for manipulating regression models and for describing these in a style adapted for medical journals. It contains functions for generating an HTML table with crude and adjusted estimates, plotting hazard ratio, plotting model estimates and confidence intervals using forest plots, extending this to comparing multiple models in a single forest plots. In addition to the descriptive methods, there are functions for the robust covariance matrix provided by the sandwich package, a function for adding non-linearities to a model, and a wrapper around the Epi package's Lexis() functions for time-splitting a dataset when modeling non-proportional hazards in Cox regressions.
This is package for regression modeling using rules with added instance-based corrections.
This package provides tools to safely and efficiently organize and execute Monte Carlo simulation experiments in R. The package controls the structure and back-end of Monte Carlo simulation experiments by utilizing a generate-analyse-summarise workflow. The workflow safeguards against common simulation coding issues, such as automatically re-simulating non-convergent results, prevents inadvertently overwriting simulation files, catches error and warning messages during execution, implicitly supports parallel processing with high-quality random number generation, and provides tools for managing high-performance computing (HPC) array jobs submitted to schedulers such as SLURM. For a pedagogical introduction to the package see Sigal and Chalmers (2016) <doi:10.1080/10691898.2016.1246953>. For a more in-depth overview of the package and its design philosophy see Chalmers and Adkins (2020) <doi:10.20982/tqmp.16.4.p248>.
R-wrs2 offers a range of strong stats methods from Wilcox WRS functions. It implements robust t-tests, both independent and dependent, robust ANOVA, including designs with between-within subjects, quantile ANOVA, robust correlation, robust mediation, and nonparametric ANCOVA models using robust location measures.