_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-tolerance 3.0.0
Propagated dependencies: r-mass@7.3-65 r-plotly@4.11.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/tolerance/
Licenses: GPL 2+
Build system: r
Synopsis: Statistical tolerance intervals and regions
Description:

This package provides functions for estimating tolerance limits (intervals) for various univariate distributions (binomial, Cauchy, discrete Pareto, exponential, two-parameter exponential, extreme value, hypergeometric, Laplace, logistic, negative binomial, negative hypergeometric, normal, Pareto, Poisson-Lindley, Poisson, uniform, and Zipf-Mandelbrot), Bayesian normal tolerance limits, multivariate normal tolerance regions, nonparametric tolerance intervals, tolerance bands for regression settings (linear regression, nonlinear regression, nonparametric regression, and multivariate regression), and analysis of variance tolerance intervals. Visualizations are also available for most of these settings.

r-prroc 1.4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/PRROC/
Licenses: GPL 3
Build system: r
Synopsis: Precision-Recall and ROC curves for weighted and unweighted data
Description:

This package computes the areas under the precision-recall (PR) and ROC curve for weighted (e.g. soft-labeled) and unweighted data. In contrast to other implementations, the interpolation between points of the PR curve is done by a non-linear piecewise function. In addition to the areas under the curves, the curves themselves can also be computed and plotted by a specific S3-method.

r-systemfonts 1.3.1
Dependencies: fontconfig-minimal@2.14.0 freetype@2.13.3 zlib@1.3.1
Propagated dependencies: r-base64enc@0.1-3 r-cpp11@0.5.2 r-jsonlite@2.0.0 r-lifecycle@1.0.4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/r-lib/systemfonts
Licenses: Expat
Build system: r
Synopsis: System native font finding
Description:

This package provides system native access to the font catalogue. As font handling varies between systems it is difficult to correctly locate installed fonts across different operating systems. The 'systemfonts' package provides bindings to the native libraries for finding font files that can then be used further by e.g. graphic devices.

r-mcmcglmm 2.36
Propagated dependencies: r-ape@5.8-1 r-coda@0.19-4.1 r-corpcor@1.6.10 r-cubature@2.1.4-1 r-matrix@1.7-4 r-tensora@0.36.2.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/jarrodhadfield/MCMCglmm
Licenses: GPL 2+
Build system: r
Synopsis: MCMC generalised linear mixed models
Description:

This package fits multivariate generalized linear mixed models and related models. This is done using Markov chain Monte Carlo techniques.

r-aricode 1.0.3
Propagated dependencies: r-matrix@1.7-4 r-rcpp@1.1.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/jchiquet/aricode
Licenses: GPL 3+
Build system: r
Synopsis: Efficient computations of standard clustering comparison measures
Description:

This package implements an efficient O(n) algorithm based on bucket-sorting for fast computation of standard clustering comparison measures. Available measures include adjusted Rand index (ARI), normalized information distance (NID), normalized mutual information (NMI), adjusted mutual information (AMI), normalized variation information (NVI) and entropy.

r-abind 1.4-8
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/abind/
Licenses: LGPL 2.0+
Build system: r
Synopsis: Combine multidimensional arrays
Description:

This package provides tools to combine multidimensional arrays into a single array. This is a generalization of cbind and rbind. It works with vectors, matrices, and higher-dimensional arrays. It also provides the functions adrop, asub, and afill for manipulating, extracting and replacing data in arrays.

r-rliger 0.4.2
Propagated dependencies: r-cowplot@1.2.0 r-dosnow@1.0.20 r-dplyr@1.1.4 r-fnn@1.1.4.1 r-foreach@1.5.2 r-ggplot2@4.0.1 r-ggrepel@0.9.6 r-hmisc@5.2-4 r-ica@1.0-3 r-irlba@2.3.5.1 r-matrix@1.7-4 r-mclust@6.1.2 r-patchwork@1.3.2 r-plyr@1.8.9 r-rann-l1@2.5.2 r-rcpp@1.1.0 r-rcpparmadillo@15.2.2-1 r-riverplot@0.10 r-rtsne@0.17 r-snow@0.4-4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/MacoskoLab/liger
Licenses: GPL 3
Build system: r
Synopsis: Integrate and analyze multiple single-cell datasets
Description:

LIGER is a package for integrating and analyzing multiple single-cell datasets, developed and maintained by the Macosko lab. It relies on integrative non-negative matrix factorization to identify shared and dataset-specific factors.

r-tweedie 2.3.5
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/tweedie/
Licenses: GPL 2+
Build system: r
Synopsis: Evaluation of Tweedie exponential family models
Description:

Maximum likelihood computations for Tweedie families, including the series expansion (Dunn and Smyth, 2005; <doi10.1007/s11222-005-4070-y>) and the Fourier inversion (Dunn and Smyth, 2008; <doi:10.1007/s11222-007-9039-6>), and related methods.

r-rcdt 1.3.0
Propagated dependencies: r-bh@1.87.0-1 r-colorsgen@1.0.0 r-gplots@3.2.0 r-polychrome@1.5.4 r-rcpp@1.1.0 r-rcpparmadillo@15.2.2-1 r-rgl@1.3.31 r-rvcg@0.25
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/stla/RCDT
Licenses: GPL 3
Build system: r
Synopsis: Fast 2D constrained Delaunay triangulation
Description:

This package performs 2D Delaunay triangulation, constrained or unconstrained, with the help of the C++ library CDT. A function to plot the triangulation is provided. The constrained Delaunay triangulation has applications in geographic information systems.

r-profmem 0.7.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/HenrikBengtsson/profmem
Licenses: LGPL 2.1+
Build system: r
Synopsis: Simple memory profiling for R
Description:

This package provides a simple and light-weight API for memory profiling of R expressions. The profiling is built on top of R's built-in memory profiler utils::Rprofmem(), which records every memory allocation done by R (also native code).

r-sctransform 0.4.2
Propagated dependencies: r-dplyr@1.1.4 r-future@1.68.0 r-future-apply@1.20.0 r-ggplot2@4.0.1 r-gridextra@2.3 r-magrittr@2.0.4 r-mass@7.3-65 r-matrix@1.7-4 r-matrixstats@1.5.0 r-rcpp@1.1.0 r-rcpparmadillo@15.2.2-1 r-reshape2@1.4.5 r-rlang@1.1.6
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/ChristophH/sctransform
Licenses: GPL 3
Build system: r
Synopsis: Variance stabilizing transformations for Single Cell UMI Data
Description:

This package provides a normalization method for single-cell UMI count data using a variance stabilizing transformation. The transformation is based on a negative binomial regression model with regularized parameters. As part of the same regression framework, this package also provides functions for batch correction, and data correction.

r-acebayes 1.11
Propagated dependencies: r-compare@0.2-6 r-lhs@1.2.0 r-randtoolbox@2.0.5 r-rcpp@1.1.0 r-rcpparmadillo@15.2.2-1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/acebayes/
Licenses: GPL 2
Build system: r
Synopsis: Optimal Bayesian experimental design using the ACE algorithm
Description:

Finding an optimal Bayesian experimental design involves maximizing an objective function given by the expectation of some appropriately chosen utility function with respect to the joint distribution of unknown quantities (including responses). This objective function is usually not available in closed form and the design space can be continuous and of high dimensionality. This package uses Approximate Coordinate Exchange (ACE) to maximise an approximation to the expectation of the utility function.

r-invgamma 1.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/dkahle/invgamma
Licenses: GPL 2
Build system: r
Synopsis: Inverse gamma distribution
Description:

This package provides a light weight implementation of the standard distribution functions for the inverse gamma distribution, wrapping those for the gamma distribution in the stats package.

r-sftime 0.3.1
Propagated dependencies: r-sf@1.0-23
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=sftime
Licenses: ASL 2.0
Build system: r
Synopsis: Simple feature objects that have a time column
Description:

This package provides classes and methods for spatial objects that have a registered time column, in particular for irregular spatiotemporal data. The time column can be of any type, but needs to be ordinal. Regularly laid out spatiotemporal data (vector or raster data cubes) are handled by package stars'.

r-striprtf 0.6.0
Propagated dependencies: r-magrittr@2.0.4 r-rcpp@1.1.0 r-stringr@1.6.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/kota7/striprtf
Licenses: Expat
Build system: r
Synopsis: Extract Text from RTF File
Description:

Extracts plain text from Rich Text Format (RTF) file.

r-priorsense 1.2.0
Propagated dependencies: r-checkmate@2.3.3 r-ggdist@3.3.3 r-ggh4x@0.3.1 r-ggplot2@4.0.1 r-matrixstats@1.5.0 r-posterior@1.6.1 r-rlang@1.1.6 r-tibble@3.3.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/n-kall/priorsense
Licenses: GPL 3+
Build system: r
Synopsis: Prior diagnostics and sensitivity analysis
Description:

This package provides functions for prior and likelihood sensitivity analysis in Bayesian models. It implements methods to determine the sensitivity of the posterior to power-scaling perturbations of the prior and likelihood.

r-digest 0.6.39
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://dirk.eddelbuettel.com/code/digest.html
Licenses: GPL 2+
Build system: r
Synopsis: Create cryptographic hash digests of R objects
Description:

This package contains an implementation of a function digest() for the creation of hash digests of arbitrary R objects (using the md5, sha-1, sha-256, crc32, xxhash and murmurhash algorithms) permitting easy comparison of R language objects, as well as a function hmac() to create hash-based message authentication code.

Please note that this package is not meant to be deployed for cryptographic purposes for which more comprehensive (and widely tested) libraries such as OpenSSL should be used.

r-raceid 0.3.9
Propagated dependencies: r-cluster@2.1.8.1 r-coop@0.6-3 r-fateid@0.2.2 r-fnn@1.1.4.1 r-fpc@2.2-13 r-ggplot2@4.0.1 r-harmony@1.2.4 r-ica@1.0-3 r-igraph@2.2.1 r-irlba@2.3.5.1 r-leiden@0.4.3.1 r-locfit@1.5-9.12 r-mass@7.3-65 r-matrix@1.7-4 r-matrixstats@1.5.0 r-pheatmap@1.0.13 r-princurve@2.1.6 r-quadprog@1.5-8 r-randomforest@4.7-1.2 r-rcolorbrewer@1.1-3 r-rcpp@1.1.0 r-rtsne@0.17 r-runner@0.4.4 r-umap@0.2.10.0 r-vegan@2.7-2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=RaceID
Licenses: GPL 3
Build system: r
Synopsis: Algorithm for inferring cell types from single-cell RNA-seq data
Description:

This tool provides an algorithm to identify rare cell types in single-cell data. It also identifies abundant cell types. The method is based on transcript counts obtained with unique molecular identifies.

r-gplots 3.2.0
Propagated dependencies: r-catools@1.18.3 r-gtools@3.9.5 r-kernsmooth@2.23-26
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/gplots
Licenses: GPL 2+
Build system: r
Synopsis: Various R programming tools for plotting data
Description:

This package provides various R programming tools for plotting data, including:

  • calculating and plotting locally smoothed summary function

  • enhanced versions of standard plots

  • manipulating colors

  • calculating and plotting two-dimensional data summaries

  • enhanced regression diagnostic plots

  • formula-enabled interface to stats::lowess function

  • displaying textual data in plots

  • balloon plots

  • plotting "Venn" diagrams

  • displaying Open-Office style plots

  • plotting multiple data on same region, with separate axes

  • plotting means and confidence intervals

  • spacing points in an x-y plot so they don't overlap

r-intervals 0.15.5
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/edzer/intervals
Licenses: Artistic License 2.0
Build system: r
Synopsis: Tools for Working with Points and Intervals
Description:

Tools for working with and comparing sets of points and intervals.

r-delaporte 8.4.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/aadler/Delaporte
Licenses: FreeBSD
Build system: r
Synopsis: Statistical functions for the Delaporte distribution
Description:

This package provides probability mass, distribution, quantile, random-variate generation, and method-of-moments parameter-estimation functions for the Delaporte distribution with parameterization based on Vose (2008). The Delaporte is a discrete probability distribution which can be considered the convolution of a negative binomial distribution with a Poisson distribution. Alternatively, it can be considered a counting distribution with both Poisson and negative binomial components. It has been studied in actuarial science as a frequency distribution which has more variability than the Poisson, but less than the negative binomial.

r-tdthap 1.3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/tdthap/
Licenses: Artistic License 2.0
Build system: r
Synopsis: TDT tests for extended haplotypes
Description:

Functions and examples are provided for transmission/disequilibrium tests for extended marker haplotypes, as in Clayton, D. and Jones, H. (1999) "Transmission/disequilibrium tests for extended marker haplotypes".

r-countrycode 1.6.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://vincentarelbundock.github.io/countrycode/
Licenses: GPL 3
Build system: r
Synopsis: Convert country names and country codes
Description:

This package lets you standardize country names, convert them into one of 40 different coding schemes, convert between coding schemes, and assign region descriptors.

r-memuse 4.2-3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/shinra-dev/memuse
Licenses: FreeBSD
Build system: r
Synopsis: Memory Estimation Utilities
Description:

This package provides procedures to answer the following questions: How much ram do you need to store a 100,000 by 100,000 matrix? How much ram is your current R session using? How much ram do you even have?

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Total results: 68658