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This package provides a utility to quickly obtain clean and tidy men's basketball play by play data. Provides functions to access live play by play and box score data from ESPN<https://www.espn.com> with shot locations when available. It is also a full NBA Stats API<https://www.nba.com/stats/> wrapper. It is also a scraping and aggregating interface for Ken Pomeroy's men's college basketball statistics website<https://kenpom.com>. It provides users with an active subscription the capability to scrape the website tables and analyze the data for themselves.
Computation of generalized hypergeometric function with tunable high precision in a vectorized manner, with the floating-point datatypes from mpfr or gmp library. The computation is limited to real numbers.
Function to identify haplotypes within QTL (Quantitative Trait Loci). One haplotype is a combination of SNP (Single Nucleotide Polymorphisms) within the QTL. This function groups together all individuals of a population with the same haplotype. Each group contains individual with the same allele in each SNP, whether or not missing data. Thus, haplotyper groups individuals, that to be imputed, have a non-zero probability of having the same alleles in the entire sequence of SNP's. Moreover, haplotyper calculates such probability from relative frequencies.
Generates valid HTML tag strings for HTML5 elements documented by Mozilla. Attributes are passed as named lists, with names being the attribute name and values being the attribute value. Attribute values are automatically double-quoted. To declare a DOCTYPE, wrap html() with function doctype(). Mozilla's documentation for HTML5 is available here: <https://developer.mozilla.org/en-US/docs/Web/HTML/Element>. Elements marked as obsolete are not included.
Perform hierarchical Bayesian Aldrich-McKelvey scaling using Hamiltonian Monte Carlo via Stan'. Aldrich-McKelvey ('AM') scaling is a method for estimating the latent positions of survey respondents and external objects on a common scale using positional survey data. The hierarchical versions of the Bayesian AM model included in this package outperform other versions both in terms of yielding meaningful posterior distributions for respondent positions and in terms of recovering true respondent positions in simulations. The package contains functions for preparing data, fitting models, extracting estimates, plotting key results, and comparing models using cross-validation. The original version of the default model is described in Bølstad (2024) <doi:10.1017/pan.2023.18>.
Most common exact, asymptotic and resample based tests are provided for testing the homogeneity of variances of k normal distributions under normality. These tests are Barlett, Bhandary & Dai, Brown & Forsythe, Chang et al., Gokpinar & Gokpinar, Levene, Liu and Xu, Gokpinar. Also, a data generation function from multiple normal distribution is provided using any multiple normal parameters. Bartlett, M. S. (1937) <doi:10.1098/rspa.1937.0109> Bhandary, M., & Dai, H. (2008) <doi:10.1080/03610910802431011> Brown, M. B., & Forsythe, A. B. (1974).<doi:10.1080/01621459.1974.10482955> Chang, C. H., Pal, N., & Lin, J. J. (2017) <doi:10.1080/03610918.2016.1202277> Gokpinar E. & Gokpinar F. (2017) <doi:10.1080/03610918.2014.955110> Liu, X., & Xu, X. (2010) <doi:10.1016/j.spl.2010.05.017> Levene, H. (1960) <https://cir.nii.ac.jp/crid/1573950400526848896> Gökpınar, E. (2020) <doi:10.1080/03610918.2020.1800037>.
Identification of recombination events, haplotype reconstruction, sire imputation and pedigree reconstruction using half-sib family SNP data.
This package implements indirect demographic methods for estimating adult mortality from orphanhood data. The package includes the standard Brass and Hill (1973) method <https://scholar.google.com/scholar_lookup?&title=Estimating%20Adult%20Mortality%20from%20Orphanhood&pages=111-23&publication_year=1973&author=Brass%2CW.&author=Hill.%2CK.>, the regression-based approach developed by Timaeus (1992) <https://pubmed.ncbi.nlm.nih.gov/12317481/>, and the adjustments proposed by Luy (2012) <doi:10.1007/s13524-012-0101-4> for low-mortality populations. A relational model is used to harmonize estimates into comparable adult mortality indicators. The package also provides diagnostic tools to assess the sensitivity of results to assumptions about the mean age of childbearing and the choice of model life table family.
Error type I and Optimal critical values to test statistical hypothesis based on Neyman-Pearson Lemma and Likelihood ratio test based on random samples from several distributions. The families of distributions are Bernoulli, Exponential, Geometric, Inverse Normal, Normal, Gamma, Gumbel, Lognormal, Poisson, and Weibull. This package is an ideal resource to help with the teaching of Statistics. The main references for this package are Casella G. and Berger R. (2003,ISBN:0-534-24312-6 , "Statistical Inference. Second Edition", Duxbury Press) and Hogg, R., McKean, J., and Craig, A. (2019,ISBN:013468699, "Introduction to Mathematical Statistic. Eighth edition", Pearson).
This package contains ten datasets used in the chapters and exercises of Paul, Alice (2023) "Health Data Science in R" <https://alicepaul.github.io/health-data-science-using-r/>.
This package provides a collection of datasets of human-computer interaction (HCI) experiments. Each dataset is from an HCI paper, with all fields described and the original publication linked. All paper authors of included data have consented to the inclusion of their data in this package. The datasets include data from a range of HCI studies, such as pointing tasks, user experience ratings, and steering tasks. Dataset sources: Bergström et al. (2022) <doi:10.1145/3490493>; Dalsgaard et al. (2021) <doi:10.1145/3489849.3489853>; Larsen et al. (2019) <doi:10.1145/3338286.3340115>; Lilija et al. (2019) <doi:10.1145/3290605.3300676>; Pohl and Murray-Smith (2013) <doi:10.1145/2470654.2481307>; Pohl and Mottelson (2022) <doi:10.3389/frvir.2022.719506>.
This package implements an estimation method for Hawkes processes when count data are only observed in discrete time, using a spectral approach derived from the Bartlett spectrum, see Cheysson and Lang (2020) <arXiv:2003.04314>. Some general use functions for Hawkes processes are also included: simulation of (in)homogeneous Hawkes process, maximum likelihood estimation, residual analysis, etc.
In medical research, supervised heterogeneity analysis has important implications. Assume that there are two types of features. Using both types of features, our goal is to conduct the first supervised heterogeneity analysis that satisfies a hierarchical structure. That is, the first type of features defines a rough structure, and the second type defines a nested and more refined structure. A penalization approach is developed, which has been motivated by but differs significantly from penalized fusion and sparse group penalization. Reference: Ren, M., Zhang, Q., Zhang, S., Zhong, T., Huang, J. & Ma, S. (2022). "Hierarchical cancer heterogeneity analysis based on histopathological imaging features". Biometrics, <doi:10.1111/biom.13426>.
Manipulate data through memory-mapped files, as vectors, matrices or arrays. Basic arithmetic functions are implemented, but currently no matrix arithmetic. Can write and read descriptor files for compatibility with the bigmemory package.
This package provides tools for species distribution modeling using H3 hexagonal grids (Uber Technologies Inc., 2022, <https://h3geo.org>). Facilitates retrieval of species occurrence records, generation of H3 grids, computation of landscape metrics, and preparation of spatial data for modern species distribution models workflows. Designed for biodiversity and landscape ecology research.
This package provides a simple implementation of doughnut plots - pie charts with a blank center. The package is named after Homer Simpson - arguably the best-known lover of doughnuts.
Audio interactivity within shiny applications using howler.js'. Enables the status of the audio player to be sent from the UI to the server, and events such as playing and pausing the audio can be triggered from the server.
This package implements the Brakerski-Fan-Vercauteren (BFV, 2012) <https://eprint.iacr.org/2012/144>, Brakerski-Gentry-Vaikuntanathan (BGV, 2014) <doi:10.1145/2633600>, and Cheon-Kim-Kim-Song (CKKS, 2016) <https://eprint.iacr.org/2016/421.pdf> schema for Fully Homomorphic Encryption. The included vignettes demonstrate the encryption procedures.
This package contains functions to construct high-dimensional orthogonal maximin distance designs in two, four, eight, and sixteen levels from rotating the Kronecker product of sub-Hadamard matrices.
This package provides a streamlined pipeline to simulate household infection dynamics, estimate transmission parameters, and visualize epidemic timelines. Uses a Bayesian approach with Stan that models transmission probability as a function of viral load, seasonality and infectivity, multiple infection episodes (reinfections), and waning immunity modeling. Li et al. (2026) <doi:10.64898/2026.04.01.26349903>).
Probabilistic models describing the behavior of workload and queue on a High Performance Cluster and computing GRID under FIFO service discipline basing on modified Kiefer-Wolfowitz recursion. Also sample data for inter-arrival times, service times, number of cores per task and waiting times of HPC of Karelian Research Centre are included, measurements took place from 06/03/2009 to 02/30/2011. Functions provided to import/export workload traces in Standard Workload Format (swf). Stability condition of the model may be verified either exactly, or approximately. Stability analysis: see Rumyantsev and Morozov (2017) <doi:10.1007/s10479-015-1917-2>, workload recursion: see Rumyantsev (2014) <doi:10.1109/PDCAT.2014.36>.
Empirical value of the Hellinger correlation, a measure of dependence between two continuous random variables. More details can be found in Geenens and Lafaye De Micheaux (2019) <arXiv:1810.10276v4>.
This package provides functions to perform dimensionality reduction for classification if the covariance matrices of the classes are unequal.
Fit, summarize and plot sinusoidal hysteretic processes using: two-step simple harmonic least squares, ellipse-specific non-linear least squares, the direct method, geometric least squares or linear least squares. See Yang, F and A. Parkhurst, "Efficient Estimation of Elliptical Hysteresis with Application to the Characterization of Heat Stress" <DOI:10.1007/s13253-015-0213-6>.