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This package implements the methods described in Bond S, Farewell V, 2006, Exact Likelihood Estimation for a Negative Binomial Regression Model with Missing Outcomes, Biometrics.
This package provides a general framework for clinical trial simulations based on the Clinical Scenario Evaluation (CSE) approach. The package supports a broad class of data models (including clinical trials with continuous, binary, survival-type and count-type endpoints as well as multivariate outcomes that are based on combinations of different endpoints), analysis strategies and commonly used evaluation criteria.
This package provides a procedure for comparing multivariate samples associated with different groups. It uses principal component analysis to convert multivariate observations into a set of linearly uncorrelated statistical measures, which are then compared using a number of statistical methods. The procedure is independent of the distributional properties of samples and automatically selects features that best explain their differences, avoiding manual selection of specific points or summary statistics. It is appropriate for comparing samples of time series, images, spectrometric measures or similar multivariate observations. This package is described in Fachada et al. (2016) <doi:10.32614/RJ-2016-055>.
Fits and tests meta regression models and generates a number of useful test statistics: next to t- and z-tests, the likelihood ratio, bartlett corrected likelihood ratio and permutation tests are performed on the model coefficients.
This package provides a graphical user interface for the MuToss Project.
This package provides functions to calculate the minimum and maximum possible values of Cronbach's alpha when item-level missing data are present. Cronbach's alpha (Cronbach, 1951 <doi:10.1007/BF02310555>) is one of the most widely used measures of internal consistency in the social, behavioral, and medical sciences (Bland & Altman, 1997 <doi:10.1136/bmj.314.7080.572>; Tavakol & Dennick, 2011 <doi:10.5116/ijme.4dfb.8dfd>). However, conventional implementations assume complete data, and listwise deletion is often applied when missingness occurs, which can lead to biased or overly optimistic reliability estimates (Enders, 2003 <doi:10.1037/1082-989X.8.3.322>). This package implements computational strategies including enumeration, Monte Carlo sampling, and optimization algorithms (e.g., Genetic Algorithm, Differential Evolution, Sequential Least Squares Programming) to obtain sharp lower and upper bounds of Cronbach's alpha under arbitrary missing data patterns. The approach is motivated by Manski's partial identification framework and pessimistic bounding ideas from optimization literature.
This package provides functions to compute and plot multivariate (partial) Mantel correlograms.
This package provides tools for high-dimensional peaks-over-threshold inference and simulation of Brown-Resnick and extremal Student spatial extremal processes. These include optimization routines based on censored likelihood and gradient scoring, and exact simulation algorithms for max-stable and multivariate Pareto distributions based on rejection sampling. Fast multivariate Gaussian and Student distribution functions using separation-of-variable algorithm with quasi Monte Carlo integration are also provided. Key references include de Fondeville and Davison (2018) <doi:10.1093/biomet/asy026>, Thibaud and Opitz (2015) <doi:10.1093/biomet/asv045>, Wadsworth and Tawn (2014) <doi:10.1093/biomet/ast042> and Genz and Bretz (2009) <doi:10.1007/978-3-642-01689-9>.
This package provides sample data sets that are used in statistics and data science courses at the Münster School of Business. The datasets refer to different business topics but also other domains, e.g. sports, traffic, etc.
This package implements area level of multivariate small area estimation using Hierarchical Bayesian method under Normal and T distribution. The rjags package is employed to obtain parameter estimates. For the reference, see Rao and Molina (2015) <doi:10.1002/9781118735855>.
To test whether the missing data mechanism, in a set of incompletely observed data, is one of missing completely at random (MCAR). For detailed description see Jamshidian, M. Jalal, S., and Jansen, C. (2014). "MissMech: An R Package for Testing Homoscedasticity, Multivariate Normality, and Missing Completely at Random (MCAR)", Journal of Statistical Software, 56(6), 1-31. <https://www.jstatsoft.org/v56/i06/> <doi:10.18637/jss.v056.i06>.
Gibbs sampler for fitting multivariate Bayesian linear regression with shrinkage priors (MBSP), using the three parameter beta normal family. The method is described in Bai and Ghosh (2018) <doi:10.1016/j.jmva.2018.04.010>.
Support JSON flattening in a long data frame way, where the nesting keys will be stored in the absolute path. It also provides an easy way to summarize the basic description of a JSON list. The idea of mojson is to transform a JSON object in an absolute serialization way, which means the early key-value pairs will appear in the heading rows of the resultant data frame. mojson also provides an alternative way of comparing two different JSON lists, returning the left/inner/right-join style results.
This package provides a suite of utility functions providing functionality commonly needed for production level projects such as logging, error handling, cache management and date-time parsing. Functions for date-time parsing and formatting require that time zones be specified explicitly, avoiding a common source of error when working with environmental time series.
This package provides a HTML widget rendering the Monaco editor. The Monaco editor is the code editor which powers VS Code'. It is particularly well developed for JavaScript'. In addition to the built-in features of the Monaco editor, the widget allows to prettify multiple languages, to view the HTML rendering of Markdown code, and to view and resize SVG images.
Use the open source MDB Tools utilities <https://github.com/mdbtools/mdbtools/>. Primarily used for converting proprietary Microsoft Access files to simple text files and then reading those as data frames.
This package provides functions for measuring population divergence from genotypic data.
This package provides a simple informative powerful test (mvnTest()) for multivariate normality proposed by Zhou and Shao (2014) <doi:10.1080/02664763.2013.839637>, which combines kurtosis with Shapiro-Wilk test that is easy for biomedical researchers to understand and easy to implement in all dimensions. This package also contains some other multivariate normality tests including Fattorini's FA test (faTest()), Mardia's skewness and kurtosis test (mardia()), Henze-Zirkler's test (mhz()), Bowman and Shenton's test (msk()), Roystonâ s H test (msw()), and Villasenor-Alva and Gonzalez-Estrada's test (msw()). Empirical power calculation functions for these tests are also provided. In addition, this package includes some functions to generate several types of multivariate distributions mentioned in Zhou and Shao (2014).
This package provides a complete toolkit to process the Munich ChronoType Questionnaire (MCTQ) for its three versions (standard, micro, and shift). MCTQ is a quantitative and validated tool to assess chronotypes using peoples sleep behavior, originally presented by Till Roenneberg, Anna Wirz-Justice, and Martha Merrow (2003, <doi:10.1177/0748730402239679>).
This package implements three bias-correction techniques from Battaglia et al. (2025 <doi:10.48550/arXiv.2402.15585>) to improve inference in regression models with covariates generated by AI or machine learning.
This package provides a toolbox for modeling manifest and latent group differences and moderation effects in various statistical network models.
Compendium of the most representative algorithms in print---vector-valued dynamic programming, linear programming, policy iteration, the weighting factor approach---for solving multi-objective Markov decision processes, with or without reward discount, over a finite or infinite horizon. Mifrani, A. (2024) <doi:10.1007/s10479-024-06439-x>; Mifrani, A. & Noll, D. <doi:10.48550/arXiv.2502.13697>; Wakuta, K. (1995) <doi:10.1016/0304-4149(94)00064-Z>.
An implementation of the Monte Carlo techniques described in details by Dufour (2006) <doi:10.1016/j.jeconom.2005.06.007> and Dufour and Khalaf (2007) <doi:10.1002/9780470996249.ch24>. The two main features available are the Monte Carlo method with tie-breaker, mc(), for discrete statistics, and the Maximized Monte Carlo, mmc(), for statistics with nuisance parameters.
This package provides an extension to MadanText for creating and analyzing co-occurrence networks in Persian text data. This package mainly makes use of the PersianStemmer (Safshekan, R., et al. (2019). <https://CRAN.R-project.org/package=PersianStemmer>), udpipe (Wijffels, J., et al. (2023). <https://CRAN.R-project.org/package=udpipe>), and shiny (Chang, W., et al. (2023). <https://CRAN.R-project.org/package=shiny>) packages.