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This library brings functools.singledispatch from Python 3.4 to Python 2.6-3.3.
Packaging is a Python module for dealing with Python packages. It offers an interface for working with package versions, names, and dependency information.
Pyro is a Distributed Object Technology system written in Python that is designed to be easy to use. It resembles Java's Remote Method Invocation (RMI). It has less similarity to CORBA, which is a system and language independent Distributed Object Technology and has much more to offer than Pyro or RMI. Pyro 3.x is no longer maintained. New projects should use Pyro4 instead, which is the new Pyro version that is actively developed.
Setuptools_scm handles managing your Python package versions in software configuration management (SCM) metadata instead of declaring them as the version argument or in a SCM managed file.
The dateutil module provides powerful extensions to the standard datetime module, available in Python 2.3+.
NumPy is the fundamental package for scientific computing with Python. It contains among other things: a powerful N-dimensional array object, sophisticated (broadcasting) functions, tools for integrating C/C++ and Fortran code, useful linear algebra, Fourier transform, and random number capabilities. Version 1.8 is the last one to contain the numpy.oldnumeric API that includes the compatibility layer numpy.oldnumeric with NumPy's predecessor Numeric.
Pluggy is an extraction of the plugin manager as used by Pytest but stripped of Pytest specific details.
Setuptools is a fully-featured, stable library designed to facilitate packaging Python projects, where packaging includes:
Python package and module definitions
distribution package metadata
test hooks
project installation
platform-specific details.
Pluggy is an extraction of the plugin manager as used by Pytest but stripped of Pytest specific details.
This package provides a pathlib-compatible Zipfile object wrapper. It provides a backport of the Path object.
Pysam is a Python module for reading and manipulating files in the SAM/BAM format. Pysam is a lightweight wrapper of the SAMtools C API. It also includes an interface for tabix.
python2-backports-functools-lru-cache is a backport of functools.lru_cache from Python 3.3.
Matplotlib is a Python 2D plotting library which produces publication quality figures in a variety of hardcopy formats and interactive environments across platforms. Matplotlib can be used in Python scripts, the python and ipython shell, web application servers, and six graphical user interface toolkits.
Cython is an optimising static compiler for both the Python programming language and the extended Cython programming language. It makes writing C extensions for Python as easy as Python itself.
This package provides an implementation of importlib.resources for older versions of Python.
This package is a backport of the functools module from Python 3.2.3 for use with older versions of Python and PyPy.
Certifi is a Python library that contains a CA certificate bundle, which is used by the Requests library to verify HTTPS requests.
Thin-wrapper around the mock package for easier use with pytest
This package provides chardet, a Python module that can automatically detect a wide range of file encodings.
This package provides a Python library intended for use in automated tests. One difficulty when testing software is that the code under test might need to read or write to files in the local file system. If the file system is not set up in just the right way, it might cause a spurious error during the test. The pyfakefs library provides a solution to problems like this by mocking file system interactions. In other words, it arranges for the code under test to interact with a fake file system instead of the real file system. The code under test requires no modification to work with pyfakefs.
Backport of funcsigs which was introduced in Python 3.3.
The lxml XML toolkit is a Pythonic binding for the C libraries libxml2 and libxslt.
Mock is a library for testing in Python. It allows you to replace parts of your system under test with mock objects and make assertions about how they have been used. This library is now part of Python (since Python 3.3), available via the unittest.mock module.
Six is a Python 2 and 3 compatibility library. It provides utility functions for smoothing over the differences between the Python versions with the goal of writing Python code that is compatible on both Python versions. Six supports every Python version since 2.5. It is contained in only one Python file, so it can be easily copied into your project.