This package provides a package containing an environment representing the Ye6100subA.CDF file.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was YG-S98\_probe\_tab.

This package provides a package containing an environment representing the Ye6100subC.CDF file.

Affymetrix Affymetrix Yeast_2 Array annotation data (chip yeast2) assembled using data from public repositories.

This package provides a package containing an environment representing the Ye6100subB.CDF file.

This package provides a package containing an environment representing the YG_S98.cdf file.

ExpressionSet for Spellman et al. (1998) yeast cell cycle microarray experiment.

Base annotation databases for yeast, intended ONLY to be used by AnnotationDbi to produce regular annotation packages.

This package provides a collection of different sets of experimental data from yeast.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Yeast\_2\_probe\_tab.

This package provides a collection of so-called gold (and other) standard data sets.

This package provides a selection of RNA-Seq data from a yeast transcriptome experiment.

This package was created by frmaTools version 1.19.3 and hgu133ahsentrezgcdf version 19.0.0.

This package provides a package containing an environment representing the Ye6100subD.CDF file.

The ZygosityPredictor allows to predict how many copies of a gene are affected by small variants. In addition to the basic calculations of the affected copy number of a variant, the Zygosity-Predictor can integrate the influence of several variants on a gene and ultimately make a statement if and how many wild-type copies of the gene are left. This information proves to be of particular use in the context of translational medicine. For example, in cancer genomes, the Zygosity-Predictor can address whether unmutated copies of tumor-suppressor genes are present. Beyond this, it is possible to make this statement for all genes of an organism. The Zygosity-Predictor was primarily developed to handle SNVs and INDELs (later addressed as small-variants) of somatic and germline origin. In order not to overlook severe effects outside of the small-variant context, it has been extended with the assessment of large scale deletions, which cause losses of whole genes or parts of them.

zitools allows for zero inflated count data analysis by either using down-weighting of excess zeros or by replacing an appropriate proportion of excess zeros with NA. Through overloading frequently used statistical functions (such as mean, median, standard deviation), plotting functions (such as boxplots or heatmap) or differential abundance tests, it allows a wide range of downstream analyses for zero-inflated data in a less biased manner. This becomes applicable in the context of microbiome analyses, where the data is often overdispersed and zero-inflated, therefore making data analysis extremly challenging.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Zebrafish\_probe\_tab.

Base annotation databases for zebrafish, intended ONLY to be used by AnnotationDbi to produce regular annotation packages.

Zenith performs gene set analysis on the result of differential expression using linear (mixed) modeling with dream by considering the correlation between gene expression traits. This package implements the camera method from the limma package proposed by Wu and Smyth (2012). Zenith is a simple extension of camera to be compatible with linear mixed models implemented in variancePartition::dream().

This package provides a package containing an environment representing the Zebrafish.cdf file.

Affymetrix Affymetrix Zebrafish Array annotation data (chip zebrafish) assembled using data from public repositories.

arttime is a CLI application that blends beauty of ASCII / text art with functionality of clock / timer / pattern-based time manager in terminal ⏰

Clickclack is a simple haptic feedback and audio feedback tool. It does nothing more than emulate the clickclack sound and vibration when pressing keys. This tools reads from standard input and emits a vibration and/or a sound whenever it receives a character. It is intented to be used in combination with a virtual keyboard like svkbd (X11) or wvkbd (wayland).

The Factor programming language is a concatenative, stack-based programming language with high-level features including dynamic types, extensible syntax, macros, and garbage collection. On a practical side, Factor has a full-featured library, supports many different platforms, and has been extensively documented.