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Packaging is a Python module for dealing with Python packages. It offers an interface for working with package versions, names, and dependency information.
Python's built-in itertools module implements a number of iterator building blocks inspired by constructs from APL, Haskell, and SML. more-itertools includes additional building blocks for working with iterables.
Python Build Reasonableness (PBR) is a library that injects some useful and sensible default behaviors into your setuptools run. It will set versions, process requirements files and generate AUTHORS and ChangeLog file from git information.
importlib_metadata is a library which provides an API for accessing an installed Python package's metadata, such as its entry points or its top-level name. This functionality intends to replace most uses of pkg_resources entry point API and metadata API. Along with importlib.resources in Python 3.7 and newer, this can eliminate the need to use the older and less efficient pkg_resources package.
The dateutil module provides powerful extensions to the standard datetime module, available in Python 2.3+.
The lxml XML toolkit is a Pythonic binding for the C libraries libxml2 and libxslt.
ScientificPython is a collection of Python modules that are useful for scientific computing. Most modules are rather general (Geometry, physical units, automatic derivatives, ...) whereas others are more domain-specific (e.g. netCDF and PDB support). The library is currently not actively maintained and works only with Python 2 and NumPy < 1.9.
Beautiful Soup is a Python library designed for rapidly setting up screen-scraping projects. It offers Pythonic idioms for navigating, searching, and modifying a parse tree, providing a toolkit for dissecting a document and extracting what you need. It automatically converts incoming documents to Unicode and outgoing documents to UTF-8.
python-configparser is a backport of configparser from Python 3.5 so that it can be used directly in other versions.
Cython is an optimising static compiler for both the Python programming language and the extended Cython programming language. It makes writing C extensions for Python as easy as Python itself.
MMTK is a library for molecular simulations with an emphasis on biomolecules. It provides widely used methods such as Molecular Dynamics and normal mode analysis, but also basic routines for implementing new methods for simulation and analysis. The library is currently not actively maintained and works only with Python 2 and NumPy < 1.9.
Wcwidth measures the number of terminal column cells of wide-character codes. It is useful for those implementing a terminal emulator, or programs that carefully produce output to be interpreted by one. It is a Python implementation of the wcwidth and wcswidth C functions specified in POSIX.1-2001 and POSIX.1-2008.
Pysam is a Python module for reading and manipulating files in the SAM/BAM format. Pysam is a lightweight wrapper of the SAMtools C API. It also includes an interface for tabix.
Kiwi is an efficient C++ implementation of the Cassowary constraint solving algorithm. Kiwi has been designed from the ground up to be lightweight and fast. Kiwi ranges from 10x to 500x faster than the original Cassowary solver with typical use cases gaining a 40x improvement. Memory savings are consistently > 5x.
Certifi is a Python library that contains a CA certificate bundle, which is used by the Requests library to verify HTTPS requests.
Pycairo is a set of Python bindings for the Cairo graphics library.
The linecache module allows one to get any line from any file, while attempting to optimize internally, using a cache, the common case where many lines are read from a single file.
Pandas is a Python package providing fast, flexible, and expressive data structures designed to make working with structured (tabular, multidimensional, potentially heterogeneous) and time series data both easy and intuitive. It aims to be the fundamental high-level building block for doing practical, real world data analysis in Python.
This module is primarily a backport of the Python 3.2 contextlib to earlier Python versions. Like contextlib, it provides utilities for common tasks involving decorators and context managers. It also contains additional features that are not part of the standard library.
The SciPy library is one of the core packages that make up the SciPy stack. It provides many user-friendly and efficient numerical routines such as routines for numerical integration and optimization.
This is a backport of the standard library typing module to Python versions older than 3.5. Typing defines a standard notation for Python function and variable type annotations. The notation can be used for documenting code in a concise, standard format, and it has been designed to also be used by static and runtime type checkers, static analyzers, IDEs and other tools.
Pluggy is an extraction of the plugin manager as used by Pytest but stripped of Pytest specific details.
Directory iteration function like os.listdir(), except that instead of returning a list of bare filenames, it yields DirEntry objects that include file type and stat information along with the name. Using scandir() increases the speed of os.walk() by 2-20 times (depending on the platform and file system) by avoiding unnecessary calls to os.stat() in most cases.
This package is part of the Python standard library since version 3.5.
This Python library provides functions for converting between Julian dates and Gregorian dates.