_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-prettyb 0.2.2
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/jumpingrivers/prettyB/
Licenses: GPL 2 GPL 3
Build system: r
Synopsis: Pretty Base Graphics
Description:

Drop-in replacements for standard base graphics functions. The replacements are prettier versions of the originals.

r-pedometrics 0.12.1
Dependencies: pandoc@2.19.2
Propagated dependencies: r-rcpp@1.1.0 r-latticeextra@0.6-31 r-lattice@0.22-7
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/Laboratorio-de-Pedometria/pedometrics-package
Licenses: GPL 2+
Build system: r
Synopsis: Miscellaneous Pedometric Tools
Description:

An R implementation of methods employed in the field of pedometrics, soil science discipline dedicated to studying the spatial, temporal, and spatio-temporal variation of soil using statistical and computational methods. The methods found here include the calibration of linear regression models using covariate selection strategies, computation of summary validation statistics for predictions, generation of summary plots, evaluation of the local quality of a geostatistical model of uncertainty, and so on. Other functions simply extend the functionalities of or facilitate the usage of functions from other packages that are commonly used for the analysis of soil data. Formerly available versions of suggested packages no longer available from CRAN can be obtained from the CRAN archive <https://cran.r-project.org/src/contrib/Archive/>.

r-phrases 0.1
Propagated dependencies: r-usethis@3.2.1 r-tidyverse@2.0.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/sumanstats/phrases
Licenses: GPL 3
Build system: r
Synopsis: Phrasal Verbs in English Club Website
Description:

This package contains all phrasal verbs listed in <https://www.englishclub.com/ref/Phrasal_Verbs/> as data frame. Useful for educational purpose as well as for text mining.

r-peptides 2.4.6
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/dosorio/Peptides/
Licenses: GPL 2
Build system: r
Synopsis: Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences
Description:

Includes functions to calculate several physicochemical properties and indices for amino-acid sequences as well as to read and plot XVG output files from the GROMACS molecular dynamics package.

r-plainview 0.2.2
Propagated dependencies: r-viridislite@0.4.2 r-raster@3.6-32 r-png@0.1-8 r-lattice@0.22-7 r-htmlwidgets@1.6.4 r-htmltools@0.5.8.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://r-spatial.github.io/plainview/
Licenses: Expat
Build system: r
Synopsis: Plot Raster Images Interactively on a Plain HTML Canvas
Description:

This package provides methods for plotting potentially large (raster) images interactively on a plain HTML canvas. In contrast to package mapview data are plotted without background map, but data can be projected to any spatial coordinate reference system. Supports plotting of classes RasterLayer', RasterStack', RasterBrick (from package raster') as well as png files located on disk. Interactivity includes zooming, panning, and mouse location information. In case of multi-layer RasterStacks or RasterBricks', RGB image plots are created (similar to raster::plotRGB - but interactive).

r-partitioncomparison 0.2.6
Propagated dependencies: r-rdpack@2.6.4 r-lpsolve@5.6.23
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/KIT-IISM-EM/partitionComparison
Licenses: Expat
Build system: r
Synopsis: Implements Measures for the Comparison of Two Partitions
Description:

This package provides several measures ((dis)similarity, distance/metric, correlation, entropy) for comparing two partitions of the same set of objects. The different measures can be assigned to three different classes: Pair comparison (containing the famous Jaccard and Rand indices), set based, and information theory based. Many of the implemented measures can be found in Albatineh AN, Niewiadomska-Bugaj M and Mihalko D (2006) <doi:10.1007/s00357-006-0017-z> and Meila M (2007) <doi:10.1016/j.jmva.2006.11.013>. Partitions are represented by vectors of class labels which allow a straightforward integration with existing clustering algorithms (e.g. kmeans()). The package is mostly based on the S4 object system.

r-passed 1.2-2
Propagated dependencies: r-rootsolve@1.8.2.4 r-betareg@3.2-4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PASSED
Licenses: GPL 2+
Build system: r
Synopsis: Calculate Power and Sample Size for Two Sample Mean Tests
Description:

Power calculations are a critical component of any research study to determine the minimum sample size necessary to detect differences between multiple groups. Here we present an R package, PASSED', that performs power and sample size calculations for the test of two-sample means or ratios with data following beta, gamma (Chang et al. (2011), <doi:10.1007/s00180-010-0209-1>), normal, Poisson (Gu et al. (2008), <doi:10.1002/bimj.200710403>), binomial, geometric, and negative binomial (Zhu and Lakkis (2014), <doi:10.1002/sim.5947>) distributions.

r-plottools 0.4.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://ms609.github.io/PlotTools/
Licenses: GPL 2+
Build system: r
Synopsis: Extended Tools for Continuous Legends, Polygon Manipulation, and Visual Display of Categorical Data
Description:

Annotate plots with legends for continuous variables and colour spectra using the base graphics plotting tools; and manipulate irregular polygons. Includes palettes for colour-blind viewers.

r-peaxai 1.0.0
Propagated dependencies: r-rms@8.1-0 r-rminer@1.5.0 r-prroc@1.4 r-proc@1.19.0.1 r-isotone@1.1-2 r-iml@0.11.4 r-fastshap@0.1.1 r-dplyr@1.1.4 r-dear@1.5.3 r-caret@7.0-1 r-benchmarking@0.33
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/rgonzalezmoyano/PEAXAI
Licenses: GPL 3
Build system: r
Synopsis: Probabilistic Efficiency Analysis Using Explainable Artificial Intelligence
Description:

This package provides a probabilistic framework that integrates Data Envelopment Analysis (DEA) (Banker et al., 1984) <doi:10.1287/mnsc.30.9.1078> with machine learning classifiers (Kuhn, 2008) <doi:10.18637/jss.v028.i05> to estimate both the (in)efficiency status and the probability of efficiency for decision-making units. The approach trains predictive models on DEA-derived efficiency labels (Charnes et al., 1985) <doi:10.1016/0304-4076(85)90133-2>, enabling explainable artificial intelligence (XAI) workflows with global and local interpretability tools, including permutation importance (Molnar et al., 2018) <doi:10.21105/joss.00786>, Shapley value explanations (Strumbelj & Kononenko, 2014) <doi:10.1007/s10115-013-0679-x>, and sensitivity analysis (Cortez, 2011) <https://CRAN.R-project.org/package=rminer>. The framework also supports probability-threshold peer selection and counterfactual improvement recommendations for benchmarking and policy evaluation. The probabilistic efficiency framework is detailed in González-Moyano et al. (2025) "Probability-based Technical Efficiency Analysis through Machine Learning", in review for publication.

r-powerbal 0.0.1.1
Propagated dependencies: r-treebalance@1.2.0 r-scales@1.4.0 r-r-utils@2.13.0 r-phytools@2.5-2 r-diversitree@0.10-1 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=poweRbal
Licenses: GPL 3+
Build system: r
Synopsis: Phylogenetic Tree Models and the Power of Tree Shape Statistics
Description:

The first goal of this package is to provide a multitude of tree models, i.e., functions that generate rooted binary trees with a given number of leaves. Second, the package allows for an easy evaluation and comparison of tree shape statistics by estimating their power to differentiate between different tree models. Please note that this R package was developed alongside the manuscript "Tree balance in phylogenetic models" by S. J. Kersting, K. Wicke, and M. Fischer (2024) <doi:10.48550/arXiv.2406.05185>, which provides further background and the respective mathematical definitions. This project was supported by the project ArtIGROW, which is a part of the WIR!-Alliance ArtIFARM â Artificial Intelligence in Farming funded by the German Federal Ministry of Education and Research (No. 03WIR4805).

r-precondition 0.1.0
Propagated dependencies: r-rlang@1.1.6
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=precondition
Licenses: Expat
Build system: r
Synopsis: Lightweight Precondition, Postcondition, and Sanity Checks
Description:

This package implements fast, safe, and customizable assertions routines, which can be used in place of base::stopifnot().

r-pooledpeaks 1.2.2
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-rlang@1.1.6 r-qpdf@1.4.1 r-pdftools@3.6.0 r-magrittr@2.0.4 r-fragman@1.0.9 r-dplyr@1.1.4 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/kmkuesters/pooledpeaks
Licenses: GPL 3+
Build system: r
Synopsis: Genetic Analysis of Pooled Samples
Description:

Analyzing genetic data obtained from pooled samples. This package can read in Fragment Analysis output files, process the data, and score peaks, as well as facilitate various analyses, including cluster analysis, calculation of genetic distances and diversity indices, as well as bootstrap resampling for statistical inference. Specifically tailored to handle genetic data efficiently, researchers can explore population structure, genetic differentiation, and genetic relatedness among samples. We updated some functions from Covarrubias-Pazaran et al. (2016) <doi:10.1186/s12863-016-0365-6> to allow for the use of new file formats and referenced the following to write our genetic analysis functions: Long et al. (2022) <doi:10.1038/s41598-022-04776-0>, Jost (2008) <doi:10.1111/j.1365-294x.2008.03887.x>, Nei (1973) <doi:10.1073/pnas.70.12.3321>, Foulley et al. (2006) <doi:10.1016/j.livprodsci.2005.10.021>, Chao et al. (2008) <doi:10.1111/j.1541-0420.2008.01010.x>.

r-paleoam 1.0.1
Propagated dependencies: r-vegan@2.7-2
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=paleoAM
Licenses: CC0
Build system: r
Synopsis: Simulating Assemblage Models of Abundance for the Fossil Record
Description:

This package provides functions for fitting abundance distributions over environmental gradients to the species in ecological communities, and tools for simulating the fossil assemblages from those abundance models for such communities, as well as simulating assemblages across various patterns of sedimentary history and sampling. These tools are for particular use with fossil records with detailed age models and abundance distributions used for calculating environmental gradients from ordinations or other indices based on fossil assemblages.

r-pstest 0.1.3.900
Propagated dependencies: r-mass@7.3-65 r-glmx@0.2-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/pedrohcgs/pstest
Licenses: GPL 2
Build system: r
Synopsis: Specification Tests for Parametric Propensity Score Models
Description:

The propensity score is one of the most widely used tools in studying the causal effect of a treatment, intervention, or policy. Given that the propensity score is usually unknown, it has to be estimated, implying that the reliability of many treatment effect estimators depends on the correct specification of the (parametric) propensity score. This package implements the data-driven nonparametric diagnostic tools for detecting propensity score misspecification proposed by Sant'Anna and Song (2019) <doi:10.1016/j.jeconom.2019.02.002>.

r-plotscaper 0.2.8
Propagated dependencies: r-uuid@1.2-1 r-knitr@1.50 r-jsonlite@2.0.0 r-httpuv@1.6.16 r-htmlwidgets@1.6.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://bartonicek.github.io/plotscaper/
Licenses: Expat
Build system: r
Synopsis: Explore Your Data with Interactive Figures
Description:

This package provides a framework for creating interactive figures for data exploration. All plots are automatically linked and support several kinds of interactive features, including selection, zooming, panning, and parameter manipulation. The figures can be interacted with either manually, using a mouse and a keyboard, or by running code from inside an active R session.

r-projectionbasedclustering 1.2.2
Propagated dependencies: r-vegan@2.7-2 r-shinythemes@1.2.0 r-shinyjs@2.1.0 r-shiny@1.11.1 r-rcpp@1.1.0 r-plotly@4.11.0 r-ggplot2@4.0.1 r-geometry@0.5.2 r-generalizedumatrix@1.3.1 r-deldir@2.0-4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://www.deepbionics.org
Licenses: GPL 3
Build system: r
Synopsis: Projection Based Clustering
Description:

This package provides a clustering approach applicable to every projection method is proposed here. The two-dimensional scatter plot of any projection method can construct a topographic map which displays unapparent data structures by using distance and density information of the data. The generalized U*-matrix renders this visualization in the form of a topographic map, which can be used to automatically define the clusters of high-dimensional data. The whole system is based on Thrun and Ultsch, "Using Projection based Clustering to Find Distance and Density based Clusters in High-Dimensional Data" <DOI:10.1007/s00357-020-09373-2>. Selecting the correct projection method will result in a visualization in which mountains surround each cluster. The number of clusters can be determined by counting valleys on the topographic map. Most projection methods are wrappers for already available methods in R. By contrast, the neighbor retrieval visualizer (NeRV) is based on C++ source code of the dredviz software package, and the Curvilinear Component Analysis (CCA) is translated from MATLAB ('SOM Toolbox 2.0) to R.

r-pwrgsd 2.3.8
Propagated dependencies: r-survival@3.8-3
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PwrGSD
Licenses: GPL 2+
Build system: r
Synopsis: Power in a Group Sequential Design
Description:

This package provides tools for the evaluation of interim analysis plans for sequentially monitored trials on a survival endpoint; tools to construct efficacy and futility boundaries, for deriving power of a sequential design at a specified alternative, template for evaluating the performance of candidate plans at a set of time varying alternatives. See Izmirlian, G. (2014) <doi:10.4310/SII.2014.v7.n1.a4>.

r-primertree 1.1.0
Propagated dependencies: r-xml@3.99-0.20 r-stringr@1.6.0 r-scales@1.4.0 r-reshape2@1.4.5 r-plyr@1.8.9 r-lubridate@1.9.4 r-httr2@1.2.1 r-httr@1.4.7 r-gridextra@2.3 r-ggplot2@4.0.1 r-foreach@1.5.2 r-directlabels@2025.6.24 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=primerTree
Licenses: GPL 2
Build system: r
Synopsis: Visually Assessing the Specificity and Informativeness of Primer Pairs
Description:

Identifies potential target sequences for a given set of primers and generates phylogenetic trees annotated with the taxonomies of the predicted amplification products.

r-prt 0.2.1
Propagated dependencies: r-vctrs@0.6.5 r-tibble@3.3.0 r-rlang@1.1.6 r-pillar@1.11.1 r-fst@0.9.8 r-data-table@1.17.8 r-crayon@1.5.3 r-cli@3.6.5 r-backports@1.5.0 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://nbenn.github.io/prt/
Licenses: GPL 3
Build system: r
Synopsis: Tabular Data Backed by Partitioned 'fst' Files
Description:

Intended for larger-than-memory tabular data, prt objects provide an interface to read row and/or column subsets into memory as data.table objects. Data queries, constructed as R expressions, are evaluated using the non-standard evaluation framework provided by rlang and file-backing is powered by the fast and efficient fst package.

r-psqn 0.3.2
Propagated dependencies: r-testthat@3.3.0 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-matrix@1.7-4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/boennecd/psqn
Licenses: FSDG-compatible
Build system: r
Synopsis: Partially Separable Quasi-Newton
Description:

This package provides quasi-Newton methods to minimize partially separable functions. The methods are largely described by Nocedal and Wright (2006) <doi:10.1007/978-0-387-40065-5>.

r-pop 0.1
Propagated dependencies: r-mass@7.3-65 r-igraph@2.2.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pop
Licenses: Expat
Build system: r
Synopsis: Flexible Syntax for Population Dynamic Modelling
Description:

Population dynamic models underpin a range of analyses and applications in ecology and epidemiology. The various approaches for analysing population dynamics models (MPMs, IPMs, ODEs, POMPs, PVA) each require the model to be defined in a different way. This makes it difficult to combine different modelling approaches and data types to solve a given problem. pop aims to provide a flexible and easy to use common interface for constructing population dynamic models and enabling to them to be fitted and analysed in lots of different ways.

r-phonfieldwork 0.0.17
Propagated dependencies: r-xml2@1.5.0 r-tuner@1.4.7 r-rmarkdown@2.30 r-readr@2.1.6 r-phontools@0.2-2.2 r-mime@0.13
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://CRAN.R-project.org/package=phonfieldwork
Licenses: GPL 2+
Build system: r
Synopsis: Linguistic Phonetic Fieldwork Tools
Description:

There are a lot of different typical tasks that have to be solved during phonetic research and experiments. This includes creating a presentation that will contain all stimuli, renaming and concatenating multiple sound files recorded during a session, automatic annotation in Praat TextGrids (this is one of the sound annotation standards provided by Praat software, see Boersma & Weenink 2020 <https://www.fon.hum.uva.nl/praat/>), creating an html table with annotations and spectrograms, and converting multiple formats ('Praat TextGrid, ELAN', EXMARaLDA', Audacity', subtitles .srt', and FLEx flextext). All of these tasks can be solved by a mixture of different tools (any programming language has programs for automatic renaming, and Praat contains scripts for concatenating and renaming files, etc.). phonfieldwork provides a functionality that will make it easier to solve those tasks independently of any additional tools. You can also compare the functionality with other packages: rPraat <https://CRAN.R-project.org/package=rPraat>, textgRid <https://CRAN.R-project.org/package=textgRid>.

r-pointr 0.2.0
Propagated dependencies: r-stringr@1.6.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/jsugarelli/pointr/
Licenses: GPL 3
Build system: r
Synopsis: Working Comfortably with Pointers and Shortcuts to R Objects
Description:

R has no built-in pointer functionality. The pointr package fills this gap and lets you create pointers to R objects, including subsets of dataframes. This makes your R code more readable and maintainable.

r-permalgo 1.2
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PermAlgo
Licenses: GPL 2
Build system: r
Synopsis: Permutational Algorithm to Simulate Survival Data
Description:

This version of the permutational algorithm generates a dataset in which event and censoring times are conditional on an user-specified list of covariates, some or all of which are time-dependent.

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Total results: 68658