hepunits collects the most commonly used units and constants in the HEP System of Units, as derived from the basic units originally defined by the CLHEP project.

This package provides a stable interface for interactions between Snakemake and its executor plugins.

DecayLanguage implements a language to describe and convert particle decays between digital representations, effectively making it possible to interoperate several fitting programs. Particular interest is given to programs dedicated to amplitude analyses.

This package implements a functionality to tell whether two images look nearly identical. The image hash algorithms (average, perceptual, difference, wavelet) analyse the image structure on luminance (without color information). The color hash algorithm analyses the color distribution and black & gray fractions (without position information).

Features:

• average hashing

• perceptual hashing

• difference hashing

• wavelet hashing

• HSV color hashing (colorhash)

• crop-resistant hashing

This is a package for image processing with Dask arrays. Features:

• Provides support for loading image files.

• Implements commonly used N-D filters.

• Includes a few N-D Fourier filters.

• Provides some functions for working with N-D label images.

• Supports a few N-D morphological operators.

Optimized einsum can significantly reduce the overall execution time of einsum-like expressions by optimizing the expression's contraction order and dispatching many operations to canonical BLAS, cuBLAS, or other specialized routines. Optimized einsum is agnostic to the backend and can handle NumPy, Dask, PyTorch, Tensorflow, CuPy, Sparse, Theano, JAX, and Autograd arrays as well as potentially any library which conforms to a standard API. See the documentation for more information.

This is a Python package to compute statistical test and add statistical annotations on an existing boxplots and barplots generated by seaborn.

Ruffus is designed to allow scientific and other analyses to be automated with the minimum of fuss and the least effort.

pyjanitor provides a set of data cleaning routines for pandas DataFrames. These routines extend the method chaining API defined by pandas for a subset of its methods. Originally, this package was a port of the R package by the same name and it is inspired by the ease-of-use and expressiveness of the dplyr package.

This package provides accelerated simulations and potentials of solids.

Snakemake aims to reduce the complexity of creating workflows by providing a clean and modern domain specific specification language (DSL) in Python style, together with a fast and comfortable execution environment.

This package provides a stable interface for interactions between Snakemake and its storage plugins.

PyTensor is a Python library that allows one to define, optimize, and efficiently evaluate mathematical expressions involving multi-dimensional arrays. It is a fork of the Aesara library.

The fastcluster package implements seven common hierarchical clustering schemes efficiently. The package is made with two interfaces to standard software: R and Python.

Vector is a Python library for 2D and 3D spatial vectors, as well as 4D space-time vectors. It is especially intended for performing geometric calculations on arrays of vectors, rather than one vector at a time in a Python for loop.

meshzoo is a mesh generator for finite element or finite volume computations for simple domains like regular polygons, disks, spheres, cubes, etc.

Pythran is an ahead of time compiler for a subset of the Python language, with a focus on scientific computing. It takes a Python module annotated with a few interface descriptions and turns it into a native Python module with the same interface, but (hopefully) faster.

xarray-dataclasses is a Python package that makes it easy to create xarray's DataArray and Datase objects that are "typed" (i.e. fixed dimensions, data type, coordinates, attributes, and name) using the Python's dataclass.

Plotnine is a Python implementation of the Grammar of Graphics. It is a powerful graphics concept for creating plots and visualizations in a structured and declarative manner. It is inspired by the R package ggplot2 and aims to provide a similar API and functionality in Python.

nibabel is a library that provides read and write access to common neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2 and later), GIFTI, NIfTI1, NIfTI2, CIFTI-2, MINC1, MINC2, AFNI BRIK/HEAD, ECAT and Philips PAR/REC. In addition, NiBabel also supports FreeSurfer’s MGH, geometry, annotation and morphometry files, and provides some limited support for DICOM.

Plotly's Python graphing library makes interactive,publication-quality graphs online. Examples of how to make line plots, scatter plots, area charts, bar charts, error bars, box plots, histograms, heatmaps, subplots, multiple-axes, polar charts, and bubble charts.

This package provides a stable interface for interactions between Snakemake and its software deployment plugins.

Baycomp is a library for Bayesian comparison of classifiers. Functions in the library compare two classifiers on one or on multiple data sets. They compute three probabilities: the probability that the first classifier has higher scores than the second, the probability that differences are within the region of practical equivalence (rope), or that the second classifier has higher scores.

This is the Python package for ECOS: Embedded Cone Solver. ECOS is numerical software for solving convex second-order cone programs (SOCPs).