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Robust estimators for generalized ratio model (Wada, Sakashita and Tsubaki, 2021)<doi:10.17713/ajs.v50i1.994> and linear regression model by the IRLS(iterative reweighted least squares) algorithm are contained.
KEEL is a popular Java software for a large number of different knowledge data discovery tasks. Furthermore, RKEEL is a package with a R code layer between R and KEEL', for using KEEL in R code. This package includes the datasets from KEEL in .dat format for its use in RKEEL package. For more information about KEEL', see <http://www.keel.es/>.
This package provides an R interface to the Data Retriever <https://retriever.readthedocs.io/en/latest/> via the Data Retriever's command line interface. The Data Retriever automates the tasks of finding, downloading, and cleaning public datasets, and then stores them in a local database.
The tools and utilities to estimate the model described in "Gremlin's in the Data: Identifying the Information Content of Research Subjects" (Howell et al. (2021) <doi:10.1177/0022243720965930>) using conjoint analysis data such as that collected in Sawtooth Software's Lighthouse or Discover products. Additional utilities are included for formatting the input data.
This package provides tools for basic and advance cancer statistics and graphics. Groups individual data, merges registry data and population data, calculates age-specific rate, age-standardized rate, cumulative risk, estimated annual percentage rate with standards error. Creates graphics across variable and time, such as age-specific trends, bar chart and period-cohort trends.
Designed to be compatible with the R package DBI (Database Interface) when connecting to Amazon Web Service ('AWS') Athena <https://aws.amazon.com/athena/>. To do this Python Boto3 Software Development Kit ('SDK') <https://boto3.amazonaws.com/v1/documentation/api/latest/index.html> is used as a driver.
Collection of functions designed to compute risk-based portfolios as described in Ardia et al. (2017) <doi:10.1007/s10479-017-2474-7> and Ardia et al. (2017) <doi:10.21105/joss.00171>.
Graphics for statistics on a sphere, as applied to geological fault data, crystallography, earthquake focal mechanisms, radiation patterns, ternary plots and geographical/geological maps. Non-double couple plotting of focal spheres and source type maps are included for statistical analysis of moment tensors.
This package provides functions used in the R: Einführung durch angewandte Statistik (second edition).
An extremely simple stack data type, implemented with R6 classes. The size of the stack increases as needed, and the amortized time complexity is O(1). The stack may contain arbitrary objects.
Perform robust estimation and inference in platform trials and other master protocol trials. Yuhan Qian, Yifan Yi, Jun Shao, Yanyao Yi, Gregory Levin, Nicole Mayer-Hamblett, Patrick J. Heagerty, Ting Ye (2025) <doi:10.48550/arXiv.2411.12944>.
R Commander plug-in for repeated-measures and mixed-design ('split-plot') ANOVA. It adds a new menu entry for repeated measures that allows to deal with up to three within-subject factors and optionally with one or several between-subject factors. It also provides supplementary options to oneWayAnova() and multiWayAnova() functions, such as choice of ANOVA type, display of effect sizes and post hoc analysis for multiWayAnova().
Enhances the R Optimization Infrastructure ('ROI') package with the quadratic solver HiGHS'. More information about HiGHS can be found at <https://highs.dev>.
Personalized assignment to one of many treatment arms via regularized and clustered joint assignment forests as described in Ladhania, Spiess, Ungar, and Wu (2023) <doi:10.48550/arXiv.2311.00577>. The algorithm pools information across treatment arms: it considers a regularized forest-based assignment algorithm based on greedy recursive partitioning that shrinks effect estimates across arms; and it incorporates a clustering scheme that combines treatment arms with consistently similar outcomes.
Facilitates making a connection to the Revenera API and executing various queries. You can use it to get event data and metadata. The Revenera documentation is available at <https://rui-api.redoc.ly/>. This package is not supported by Flexera (owner of the software).
An implementation of the RaCE-NMA (Rank-Clustered Estimation for Network Meta-Analysis) model for post-hoc clustering of treatments or interventions by rank in network meta-analysis data. Functions for model estimation, assessment, and displaying results are provided. For more details, see Pearce and Zhou (2025) <doi:10.1017/rsm.2025.10049>.
This is a Google Forms and Google Classroom API Wrapper for R for managing Google Classrooms from R. The documentation for these APIs is here <https://developers.google.com/forms/api/guides> .
Encrypt R objects to a raw vector or file using modern cryptographic techniques. Password-based key derivation is with Argon2 (<https://en.wikipedia.org/wiki/Argon2>). Objects are serialized and then encrypted using XChaCha20-Poly1305 (<https://en.wikipedia.org/wiki/ChaCha20-Poly1305>) which follows RFC 8439 for authenticated encryption (<https://en.wikipedia.org/wiki/Authenticated_encryption>). Cryptographic functions are provided by the included monocypher C library (<https://monocypher.org>).
Calculates the distance between each voter in a voter file (given lat/long coordinates or sf point geometries) and multiple polling or vote-by-mail drop box locations. Returns nearest location, k-nearest locations, or all locations within a distance threshold. Core computation uses the Haversine formula implemented in C++ via Rcpp'.
Calculates risk differences (or prevalence differences for cross-sectional data) and Number Needed to Treat (NNT) using generalized linear models with automatic link function selection. Provides robust model fitting with fallback methods, support for stratification and adjustment variables, inverse probability of treatment weighting (IPTW) for causal inference with NNT calculations, and publication-ready output formatting. Handles model convergence issues gracefully and provides confidence intervals using multiple approaches. Methods are based on approaches described in Mark W. Donoghoe and Ian C. Marschner (2018) "logbin: An R Package for Relative Risk Regression Using the Log-Binomial Model" <doi:10.18637/jss.v086.i09> for robust GLM fitting, Peter C. Austin (2011) "An Introduction to Propensity Score Methods for Reducing the Effects of Confounding in Observational Studies" <doi:10.1080/00273171.2011.568786> for IPTW methods, and standard epidemiological methods for risk difference estimation as described in Kenneth J. Rothman, Sander Greenland and Timothy L. Lash (2008, ISBN:9780781755641) "Modern Epidemiology".
Compute spatially explicit land-use metrics for stream survey sites in GRASS GIS and R as an open-source implementation of IDW-PLUS (Inverse Distance Weighted Percent Land Use for Streams). The package includes functions for preprocessing digital elevation and streams data, and one function to compute all the spatially explicit land use metrics described in Peterson et al. (2011) <doi:10.1111/j.1365-2427.2010.02507.x> and previously implemented by Peterson and Pearse (2017) <doi:10.1111/1752-1688.12558> in ArcGIS-Python as IDW-PLUS.
This package provides tools for filtering occurrence records, generating alpha-hull-derived range polygons and mapping species distributions.
Collects published kinetics of ribulose 1,5-bisphosphate carboxylase/oxygenase (Rubisco) and uses these kinetics to model the carboxylation rate across CO2 and O2 concentrations and different temperatures. The carboxylation rate can be modeled as the gross rate or the net rate, which takes into account the oxygenase activity of the enzyme using one of the three known phosphoglycolate salvage pathways. Custom enzymes and temperature dependences can be created with user kinetics, or published kinetics can be accessed through a meta-analysis contained within the package. An expansion of methods from Harrison et al. (2025) <doi:10.1128/aem.00604-25>.
This package provides tools for constructing longitudinal decision paths, quantifying temporal drift, tracking subgroup disparity trajectories, and stress-testing longitudinal conclusions under hidden bias. Implements three signature metrics: the Drift Intensity Index (DII), which measures structural instability in transition dynamics using the Frobenius norm of consecutive transition matrix differences; the Bias Amplification Index (BAI), which quantifies whether group disparities widen or converge over time; and the Temporal Fragility Index (TFI), which estimates the minimum hidden-bias perturbation required to nullify a longitudinal trend conclusion. An interactive shiny application supports exploratory analysis, visualization, and reproducible reporting. Methods are motivated by applications in educational and social science research, including the Early Childhood Longitudinal Study (ECLS). The DII is based on the Frobenius norm as described in Golub and Van Loan (2013, ISBN:9781421407944). The TFI extends the hidden-bias sensitivity framework of Rosenbaum (2002, ISBN:9781441912633). The BAI draws on disparity-trajectory methods discussed in Duncan and Murnane (2011, ISBN:9780871542731).