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\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-humanstemcell 0.50.0
Propagated dependencies: r-hgu133plus2-db@3.13.0 r-biobase@2.70.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/humanStemCell
Licenses: Artistic License 2.0
Build system: r
Synopsis: Human Stem Cells time course experiment
Description:

Affymetrix time course experiment on human stem cells (two time points: undifferentiated and differentiated).

r-hibed 1.8.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://github.com/SalasLab/HiBED
Licenses: GPL 3
Build system: r
Synopsis: HiBED
Description:

Hierarchical deconvolution for extensive cell type resolution in the human brain using DNA methylation. The HiBED deconvolution estimates proportions up to 7 cell types (GABAergic neurons, glutamatergic neurons, astrocytes, microglial cells, oligodendrocytes, endothelial cells, and stromal cells) in bulk brain tissues.

r-hgug4110b-db 3.2.3
Propagated dependencies: r-org-hs-eg-db@3.22.0 r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hgug4110b.db
Licenses: Artistic License 2.0
Build system: r
Synopsis: Agilent Human 1A (V2) annotation data (chip hgug4110b)
Description:

Agilent Human 1A (V2) annotation data (chip hgug4110b) assembled using data from public repositories.

r-h5vc 2.44.0
Propagated dependencies: r-s4vectors@0.48.0 r-rsamtools@2.26.0 r-rhtslib@3.6.0 r-rhdf5@2.54.0 r-reshape@0.8.10 r-iranges@2.44.0 r-h5vcdata@2.30.0 r-gridextra@2.3 r-ggplot2@4.0.1 r-genomicranges@1.62.0 r-genomeinfodb@1.46.0 r-biostrings@2.78.0 r-biocparallel@1.44.0 r-batchjobs@1.10 r-abind@1.4-8
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/h5vc
Licenses: GPL 3+
Build system: r
Synopsis: Managing alignment tallies using a hdf5 backend
Description:

This package contains functions to interact with tally data from NGS experiments that is stored in HDF5 files.

r-htmg430aprobe 2.18.0
Propagated dependencies: r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/htmg430aprobe
Licenses: LGPL 2.0+
Build system: r
Synopsis: Probe sequence data for microarrays of type htmg430a
Description:

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HT\_MG-430A\_probe\_tab.

r-hiccompare 1.32.0
Propagated dependencies: r-s4vectors@0.48.0 r-rhdf5@2.54.0 r-pheatmap@1.0.13 r-mgcv@1.9-4 r-kernsmooth@2.23-26 r-iranges@2.44.0 r-interactionset@1.38.0 r-gtools@3.9.5 r-gridextra@2.3 r-ggplot2@4.0.1 r-genomicranges@1.62.0 r-dplyr@1.1.4 r-data-table@1.17.8 r-biocparallel@1.44.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://github.com/dozmorovlab/HiCcompare
Licenses: Expat
Build system: r
Synopsis: HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasets
Description:

HiCcompare provides functions for joint normalization and difference detection in multiple Hi-C datasets. HiCcompare operates on processed Hi-C data in the form of chromosome-specific chromatin interaction matrices. It accepts three-column tab-separated text files storing chromatin interaction matrices in a sparse matrix format which are available from several sources. HiCcompare is designed to give the user the ability to perform a comparative analysis on the 3-Dimensional structure of the genomes of cells in different biological states.`HiCcompare` differs from other packages that attempt to compare Hi-C data in that it works on processed data in chromatin interaction matrix format instead of pre-processed sequencing data. In addition, `HiCcompare` provides a non-parametric method for the joint normalization and removal of biases between two Hi-C datasets for the purpose of comparative analysis. `HiCcompare` also provides a simple yet robust method for detecting differences between Hi-C datasets.

r-hgu219-db 3.2.3
Propagated dependencies: r-org-hs-eg-db@3.22.0 r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hgu219.db
Licenses: Artistic License 2.0
Build system: r
Synopsis: Affymetrix Human Genome 219 Plate annotation data (chip hgu219)
Description:

Affymetrix Human Genome 219 Plate annotation data (chip hgu219) assembled using data from public repositories.

r-hgug4112a-db 3.2.3
Propagated dependencies: r-org-hs-eg-db@3.22.0 r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hgug4112a.db
Licenses: Artistic License 2.0
Build system: r
Synopsis: Agilent "Human Genome, Whole" annotation data (chip hgug4112a)
Description:

Agilent "Human Genome, Whole" annotation data (chip hgug4112a) assembled using data from public repositories.

r-hgu95av2probe 2.18.0
Propagated dependencies: r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hgu95av2probe
Licenses: LGPL 2.0+
Build system: r
Synopsis: Probe sequence data for microarrays of type hgu95av2
Description:

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HG\_U95Av2\_probe\_tab.

r-hu35ksubaprobe 2.18.0
Propagated dependencies: r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hu35ksubaprobe
Licenses: LGPL 2.0+
Build system: r
Synopsis: Probe sequence data for microarrays of type hu35ksuba
Description:

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Hu35KsubA\_probe\_tab.

r-hubmapr 1.4.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://christinehou11.github.io/HuBMAPR/
Licenses: Artistic License 2.0
Build system: r
Synopsis: Interface to 'HuBMAP'
Description:

HuBMAP provides an open, global bio-molecular atlas of the human body at the cellular level. The `datasets()`, `samples()`, `donors()`, `publications()`, and `collections()` functions retrieves the information for each of these entity types. `*_details()` are available for individual entries of each entity type. `*_derived()` are available for retrieving derived datasets or samples for individual entries of each entity type. Data files can be accessed using `bulk_data_transfer()`.

r-hthgu133a-db 3.13.0
Propagated dependencies: r-org-hs-eg-db@3.22.0 r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hthgu133a.db
Licenses: Artistic License 2.0
Build system: r
Synopsis: Affymetrix Affymetrix HT_HG-U133A Array annotation data (chip hthgu133a)
Description:

Affymetrix Affymetrix HT_HG-U133A Array annotation data (chip hthgu133a) assembled using data from public repositories.

r-human660quadv1acrlmm 1.0.3
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/human660quadv1aCrlmm
Licenses: Artistic License 2.0
Build system: r
Synopsis: Metadata for fast genotyping with the 'crlmm' package
Description:

Package with metadata for genotyping Illumina 660kQuad arrays using the crlmm package.

r-hgu95eprobe 2.18.0
Propagated dependencies: r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hgu95eprobe
Licenses: LGPL 2.0+
Build system: r
Synopsis: Probe sequence data for microarrays of type hgu95e
Description:

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HG-U95E\_probe\_tab.

r-hspeccdf 0.99.1
Propagated dependencies: r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hspeccdf
Licenses: LGPL 2.0+
Build system: r
Synopsis: hspeccdf
Description:

This package provides a package containing an environment representing the HGU133Plus2_Hs_Hspec.cdf file.

r-hugene10stv1cdf 2.18.0
Propagated dependencies: r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hugene10stv1cdf
Licenses: LGPL 2.0+
Build system: r
Synopsis: hugene10stv1cdf
Description:

This package provides a package containing an environment representing the HuGene-1_0-st-v1.cdf file.

r-hcg110-db 3.13.0
Propagated dependencies: r-org-hs-eg-db@3.22.0 r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hcg110.db
Licenses: Artistic License 2.0
Build system: r
Synopsis: Affymetrix Affymetrix HC_G110 Array annotation data (chip hcg110)
Description:

Affymetrix Affymetrix HC_G110 Array annotation data (chip hcg110) assembled using data from public repositories.

r-hicdatalymphoblast 1.46.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/HiCDataLymphoblast
Licenses: GPL 3
Build system: r
Synopsis: Human lymphoblastoid HiC data from Lieberman-Aiden et al. 2009
Description:

The HiC data from human lymphoblastoid cell line (HindIII restriction) was retrieved from the sequence read archive and two ends of the paired reads were aligned separately with bowtie.

r-hthgu133aprobe 2.18.0
Propagated dependencies: r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hthgu133aprobe
Licenses: LGPL 2.0+
Build system: r
Synopsis: Probe sequence data for microarrays of type hthgu133a
Description:

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HT\_HG-U133A\_probe\_tab.

r-htmg430a-db 3.13.0
Propagated dependencies: r-org-mm-eg-db@3.22.0 r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/htmg430a.db
Licenses: Artistic License 2.0
Build system: r
Synopsis: Affymetrix Affymetrix HT_MG-430A Array annotation data (chip htmg430a)
Description:

Affymetrix Affymetrix HT_MG-430A Array annotation data (chip htmg430a) assembled using data from public repositories.

r-hgu133plus2frmavecs 1.5.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hgu133plus2frmavecs
Licenses: GPL 2+
Build system: r
Synopsis: Vectors used by frma for microarrays of type hgu133plus2
Description:

This package was created by frmaTools version 1.19.3 and hgu133ahsentrezgcdf version 19.0.0.

r-hapmap500knsp 1.52.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hapmap500knsp
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Sample data - Hapmap 500K NSP Affymetrix
Description:

Sample dataset obtained from http://www.hapmap.org.

r-hu6800subbcdf 2.18.0
Propagated dependencies: r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hu6800subbcdf
Licenses: LGPL 2.0+
Build system: r
Synopsis: hu6800subbcdf
Description:

This package provides a package containing an environment representing the Hu6800subB.CDF file.

r-hgu95acdf 2.18.0
Propagated dependencies: r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hgu95acdf
Licenses: LGPL 2.0+
Build system: r
Synopsis: hgu95acdf
Description:

This package provides a package containing an environment representing the HG_U95A.CDF file.

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Total results: 69112