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The APT Package Management System provides Debian and Debian-derived Linux systems with a powerful system to resolve package dependencies. This package offers access directly from R. This can only work on a system with a suitable libapt-pkg-dev installation so functionality is curtailed if such a library is not found.
Perform a Relative Weights Analysis (RWA) (a.k.a. Key Drivers Analysis) as per the method described in Tonidandel & LeBreton (2015) <DOI:10.1007/s10869-014-9351-z>, with its original roots in Johnson (2000) <DOI:10.1207/S15327906MBR3501_1>. In essence, RWA decomposes the total variance predicted in a regression model into weights that accurately reflect the proportional contribution of the predictor variables, which addresses the issue of multi-collinearity. In typical scenarios, RWA returns similar results to Shapley regression, but with a significant advantage on computational performance.
Traditional latent variable models assume that the population is homogeneous, meaning that all individuals in the population are assumed to have the same latent structure. However, this assumption is often violated in practice given that individuals may differ in their age, gender, socioeconomic status, and other factors that can affect their latent structure. The robust expectation maximization (REM) algorithm is a statistical method for estimating the parameters of a latent variable model in the presence of population heterogeneity as recommended by Nieser & Cochran (2023) <doi:10.1037/met0000413>. The REM algorithm is based on the expectation-maximization (EM) algorithm, but it allows for the case when all the data are generated by the assumed data generating model.
Higher-order spectra or polyspectra of time series, such as bispectrum and bicoherence, have been investigated in abundant literature and applied to problems of signal detection in a wide range of fields. This package aims to provide a simple API to estimate and analyze them. The current implementation is based on Brillinger and Irizarry (1998) <doi:10.1016/S0165-1684(97)00217-X> for estimating bispectrum or bicoherence, Lii and Helland (1981) <doi:10.1145/355958.355961> for cross-bispectrum, and Kim and Powers (1979) <doi:10.1109/TPS.1979.4317207> for cross-bicoherence.
The Nearest Neighbor Descent method for finding approximate nearest neighbors by Dong and co-workers (2010) <doi:10.1145/1963405.1963487>. Based on the Python package PyNNDescent <https://github.com/lmcinnes/pynndescent>.
This package provides a bagging predictor based on generalized linear models (GLMs) is implemented. The method is published in Song, Langfelder and Horvath (2013) <doi:10.1186/1471-2105-14-5>.
This package provides a collection of fast statistical and utility functions for data analysis. Functions for regression, maximum likelihood, column-wise statistics and many more have been included. C++ has been utilized to speed up the functions. References: Tsagris M., Papadakis M. (2018). Taking R to its limits: 70+ tips. PeerJ Preprints 6:e26605v1 <doi:10.7287/peerj.preprints.26605v1>.
This package performs exploratory projection pursuit via REPPlab (Daniel Fischer, Alain Berro, Klaus Nordhausen & Anne Ruiz-Gazen (2019) <doi:10.1080/03610918.2019.1626880>) using a Shiny app.
Data sets are often corrupted by outliers. When data are multivariate outliers can be classified as case-wise or cell-wise. The latters are particularly challenge to handle. We implement a robust estimation procedure for Seemingly Unrelated Regression Models which is able to cope well with both type of outliers. Giovanni Saraceno, Fatemah Alqallaf, Claudio Agostinelli (2021) <doi:10.48550/arXiv.2107.00975>.
This package provides a client package that makes the KorAP web service API accessible from R. The corpus analysis platform KorAP has been developed as a scientific tool to make potentially large, stratified and multiply annotated corpora, such as the German Reference Corpus DeReKo or the Corpus of the Contemporary Romanian Language CoRoLa', accessible for linguists to let them verify hypotheses and to find interesting patterns in real language use. The RKorAPClient package provides access to KorAP and the corpora behind it for user-created R code, as a programmatic alternative to the KorAP web user-interface. You can learn more about KorAP and use it directly on DeReKo at <https://korap.ids-mannheim.de/>.
This package produces tables with the level of replication (number of replicates) and the experimental uncoded values of the quantitative factors to be used for rotatable Central Composite Design (CCD) experimentation and a 2-D contour plot of the corresponding variance of the predicted response according to Mead et al. (2012) <doi:10.1017/CBO9781139020879> design_ccd(), and analyzes CCD data with response surface methodology ccd_analysis(). A rotatable CCD provides values of the variance of the predicted response that are concentrically distributed around the average treatment combination used in the experimentation, which with uniform precision (implied by the use of several replicates at the average treatment combination) improves greatly the search and finding of an optimum response. These properties of a rotatable CCD represent undeniable advantages over the classical factorial design, as discussed by Panneton et al. (1999) <doi:10.13031/2013.13267> and Mead et al. (2012) <doi:10.1017/CBO9781139020879.018> among others.
Allow function for using TGStat Stat API and TGStat Search API', for more details see <https://api.tgstat.ru/docs/ru/start/intro.html>. TGStat provide telegram channel analytics data.
Computes a novel variable importance for random forests: Impurity reduction importance scores for out-of-bag (OOB) data complementing the existing inbag Gini importance, see also <doi: 10.1080/03610926.2020.1764042>. The Gini impurities for inbag and OOB data are combined in three different ways, after which the information gain is computed at each split. This gain is aggregated for each split variable in a tree and averaged across trees.
This package provides functions to have nice rmarkdown outputs of the seasonal and trading day adjustment models made with RJDemetra'.
Utilities to access Integrated Food Security Phase Classification (IPC) and Cadre Harmonisé (CH) food security data. Wrapper functions are available for all of the IPC-CH Public API (<https://docs.api.ipcinfo.org>) simplified and advanced endpoints to easily download the data in a clean and tidy format.
Builds the TinyCC (Tiny C Compiler) command-line interface and library for package use in R'. The package compiles TinyCC from source and provides R functions to interact with the compiler. TinyCC can be used for header preprocessing, just-in-time compilation of C code in R', and lightweight C scripting workflows.
Ray Shooting Depth functions are provided for bivariate analysis. This mainly includes functions for computing the bivariate depth as well as RS median. Drawing functions for depth bags are also provided.
This package performs exact rate ratio tests.
We provide a number of algorithms to estimate fundamental statistics including Fréchet mean and geometric median for manifold-valued data. Also, C++ header files are contained that implement elementary operations on manifolds such as Sphere, Grassmann, and others. See Bhattacharya and Bhattacharya (2012) <doi:10.1017/CBO9781139094764> if you are interested in statistics on manifolds, and Absil et al (2007, ISBN:9780691132983) on computational aspects of optimization on matrix manifolds.
Create production-ready Rich Text Format (RTF) tables and figures with flexible format.
This package provides efficient functions for detecting multiple change points in multidimensional time series. The models can be piecewise constant or polynomial. Adaptive threshold selection methods are available, see Fan and Wu (2024) <arXiv:2403.00600>.
This package implements methods described by the paper Robins and Tsiatis (1991) <DOI:10.1080/03610929108830654>. These use g-estimation to estimate the causal effect of a treatment in a two-armed randomised control trial where non-compliance exists and is measured, under an assumption of an accelerated failure time model and no unmeasured confounders.
The provided package implements the statistical tests for the functional repeated measures analysis problem (Kurylo and Smaga, 2023, <arXiv:2306.03883>). These procedures enable us to verify the overall hypothesis regarding equality, as well as hypotheses for pairwise comparisons (i.e., post hoc analysis) of mean functions corresponding to repeated experiments.
This package provides a pair of functions for calculating mean residual life (MRL) , median residual life, and percentile residual life using the outputs of either the flexsurv package or parameters provided by the user. Input information about the distribution, the given life value, the percentile, and the type of residual life, and the function will return your desired values. For the flexsurv option, the function allows the user to input their own data for making predictions. This function is based on Jackson (2016) <doi:10.18637/jss.v070.i08>.