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This package implements tools for weighted network visualization and analysis, as well as Gaussian graphical model computation. It contains graph plotting methods, and tools for psychometric data visualization and graphical model estimation. See Epskamp et al. (2012) doi:10.18637/jss.v048.i04.
This package provides functions used for local regression, likelihood and density estimation.
This package implements a self-sufficient reader and writer for flat Parquet files. It can read most Parquet data types. It can write many R data types, including factors and temporal types.
This package provides functions to impute using random forest. It operates under full conditional specifications (multivariate imputation by chained equations).
This package provides multiple sources of stopwords, for use in text analysis and natural language processing.
This package provides functions for Bayesian A/B testing including prior elicitation options based on Kass and Vaidyanathan (1992) doi:10.1111/j.2517-6161.1992.tb01868.x.
This package offers quick statistical hypothesis testing for matrix rows/columns. The main goals are speed through vectorization, detailed and user-friendly output, and compatibility with tests implemented in R.
This package provides analytic derivatives and information matrices for fitted linear mixed effects (lme) models and generalized least squares (gls) models estimated using lme() (from package nlme) and gls() (from package nlme), respectively. The package includes functions for estimating the sampling variance-covariance of variance component parameters using the inverse Fisher information. The variance components include the parameters of the random effects structure (for lme models), the variance structure, and the correlation structure. The expected and average forms of the Fisher information matrix are used in the calculations, and models estimated by full maximum likelihood or restricted maximum likelihood are supported. The package also includes a function for estimating standardized mean difference effect sizes based on fitted lme or gls models.
ExtRemes is a suite of functions for carrying out analyses on the extreme values of a process of interest; be they block maxima over long blocks or excesses over a high threshold.
This package adds distinctive yet unobtrusive geometric patterns where solid color fills are normally used. Patterned figures look just as professional when viewed by colorblind readers or when printed in black and white. The dozen included patterns can be customized in terms of scale, rotation, color, fill, line type, and line width. It is compatible with the ggplot2 package as well as grid graphics.
This package provides a collection of meta-analysis datasets for teaching purposes, illustrating/testing meta-analytic methods, and validating published analyses.
This package provides R bindings for NNG (Nanomsg Next Gen), a successor to ZeroMQ. NNG is a socket library for reliable, high-performance messaging over in-process, IPC, TCP, WebSocket and secure TLS transports. It implements Scalability Protocols, a standard for common communications patterns including publish/subscribe, request/reply and service discovery. As its own threaded concurrency framework, it provides a toolkit for asynchronous programming and distributed computing. Intuitive aio objects resolve automatically when asynchronous operations complete, and synchronisation primitives allow R to wait upon events signalled by concurrent threads.
This package provides a general toolkit for downloading, managing, analyzing, and presenting data from the U.S. Census, including SF1 (Decennial short-form), SF3 (Decennial long-form), and the American Community Survey (ACS). Confidence intervals provided with ACS data are converted to standard errors to be bundled with estimates in complex acs objects. The package provides new methods to conduct standard operations on acs objects and present/plot data in statistically appropriate ways.
This package provides implementations of the family of map() functions from the purrr package that can be resolved using any future-supported backend, e.g. parallel on the local machine or distributed on a compute cluster.
Read and write feather files, a lightweight binary columnar data store designed for maximum speed.
This package provides functions to export graphics drawn with package grid to SVG format. Extra functions provide access to SVG features that are not available in standard R graphics, such as hyperlinks, animation, filters, masks, clipping paths, and gradient and pattern fills.
This package contains methods for the detection of clusters in hierarchical clustering dendrograms.
This package lets you convert R Markdown documents and Jupyter notebooks to a variety of output formats using Quarto.
Written in C++ using Rcpp, this package provides a collection of metrics for evaluating models.
HDF5 is a data model, library and file format for storing and managing large amounts of data. This package provides a nearly feature complete, object oriented wrapper for the HDF5 API using R6 classes. Additionally, functionality is added so that HDF5 objects behave very similar to their corresponding R counterparts.
This package provides system native access to the font catalogue. As font handling varies between systems it is difficult to correctly locate installed fonts across different operating systems. The 'systemfonts' package provides bindings to the native libraries for finding font files that can then be used further by e.g. graphic devices.
This package provides improved predictive models by indirect classification and bagging for classification, regression and survival problems as well as resampling based estimators of prediction error.
This package provides conditional inference procedures for the general independence problem including two-sample, K-sample (non-parametric ANOVA), correlation, censored, ordered and multivariate problems.
This package offers an implementation of the Abnormal blood profile score (ABPS). The ABPS is a part of the Athlete biological passport program of the World anti-doping agency, which combines several blood parameters into a single score in order to detect blood doping. The package also contains functions to calculate other scores used in anti-doping programs, such as the ratio of hemoglobin to reticulocytes (OFF-score), as well as example data.