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Fit occupancy models in Stan via brms'. The full variety of brms formula-based effects structures are available to use in multiple classes of occupancy model, including single-season models, models with data augmentation for never-observed species, dynamic (multiseason) models with explicit colonization and extinction processes, and dynamic models with autologistic occupancy dynamics. Formulas can be specified for all relevant distributional terms, including detection and one or more of occupancy, colonization, extinction, and autologistic depending on the model type. Several important forms of model post-processing are provided. References: Bürkner (2017) <doi:10.18637/jss.v080.i01>; Carpenter et al. (2017) <doi:10.18637/jss.v076.i01>; Socolar & Mills (2023) <doi:10.1101/2023.10.26.564080>.
This package contains the core functions associated with Fast Regularized Canonical Correlation Analysis. Please see the following for details: Raul Cruz-Cano, Mei-Ling Ting Lee, Fast regularized canonical correlation analysis, Computational Statistics & Data Analysis, Volume 70, 2014, Pages 88-100, ISSN 0167-9473 <doi:10.1016/j.csda.2013.09.020>.
Spatio-temporal Fixation Pattern Analysis (FPA) is a new method of analyzing eye movement data, developed by Mr. Jinlu Cao under the supervision of Prof. Chen Hsuan-Chih at The Chinese University of Hong Kong, and Prof. Wang Suiping at the South China Normal Univeristy. The package "fpa" is a R implementation which makes FPA analysis much easier. There are four major functions in the package: ft2fp(), get_pattern(), plot_pattern(), and lineplot(). The function ft2fp() is the core function, which can complete all the preprocessing within moments. The other three functions are supportive functions which visualize the eye fixation patterns.
Perform robust inference based on applying Fast and Robust Bootstrap on robust estimators (Van Aelst and Willems (2013) <doi:10.18637/jss.v053.i03>). This method constitutes an alternative to ordinary bootstrap or asymptotic inference. procedures when using robust estimators such as S-, MM- or GS-estimators. The available methods are multivariate regression, principal component analysis and one-sample and two-sample Hotelling tests. It provides both the robust point estimates and uncertainty measures based on the fast and robust bootstrap.
An R client for the freecurrencyapi.com currency conversion API. The API requires registration of an API key. You can find the full API documentation at <https://freecurrencyapi.com/docs> .
Basic analysis of all penalties taken in the German men's Bundesliga between the start of its inaugural season and May 2017. The main functions are suitable printing and plotting functions. Flexible selection of a player is supported via grep. Missed penalties can easily be included or excluded, depending on the user's wishes.
This package implements the h-likelihood estimation procedures for general frailty models including competing-risk models and joint models.
This package contains functions to compute the functional tangential angle pseudo-depth and its robustified version from the paper by Kuhnt and Rehage (2016). See Kuhnt, S.; Rehage, A. (2016): An angle-based multivariate functional pseudo-depth for shape outlier detection, JMVA 146, 325-340, <doi:10.1016/j.jmva.2015.10.016> for details.
Returns the noncentrality parameter of the noncentral F distribution if probability of type I and type II error, degrees of freedom of the numerator and the denominator are given. It may be useful for computing minimal detectable differences for general ANOVA models. This program is documented in the paper of A. Baharev, S. Kemeny, On the computation of the noncentral F and noncentral beta distribution; Statistics and Computing, 2008, 18 (3), 333-340.
Query data hosted in Microsoft Fabric'. Provides helpers to open DBI connections to SQL endpoints of Lakehouse and Data Warehouse items; submit Data Analysis Expressions ('DAX') queries to semantic model datasets in Microsoft Fabric and Power BI'; read Delta Lake tables stored in OneLake ('Azure Data Lake Storage Gen2'); and execute Spark code via the Livy API'.
This package provides raw and curated data on the codes, classification and conservation status of freshwater fishes in British Columbia. Marine fishes will be added in a future release.
Converts large Danish register files ('sas7bdat') into Parquet format with year-based Hive partitioning and chunked reading for larger-than-memory files. Supports parallel conversion with a targets pipeline and reading those registers into DuckDB tables for faster querying and analyses.
This package provides interface to the MATLAB toolbox Flexible Statistical Data Analysis (FSDA) which is comprehensive and computationally efficient software package for robust statistics in regression, multivariate and categorical data analysis. The current R version implements tools for regression: (forward search, S- and MM-estimation, least trimmed squares (LTS) and least median of squares (LMS)), for multivariate analysis (forward search, S- and MM-estimation), for cluster analysis and cluster-wise regression. The distinctive feature of our package is the possibility of monitoring the statistics of interest as a function of breakdown point, efficiency or subset size, depending on the estimator. This is accompanied by a rich set of graphical features, such as dynamic brushing, linking, particularly useful for exploratory data analysis.
Collect your data on digital marketing campaigns from Facebook Leads Ads using the Windsor.ai API <https://windsor.ai/api-fields/>.
Likelihood-free inference method for stochastic models. Uses a deterministic optimizer on simple simulations of the model that are performed with a prior drawn randomness by applying the inverse transform method. Is designed to work on its own and also by using the Julia package Jflimo available on the git page of the project: <https://metabarcoding.org/flimo>.
Routines for estimating tree fiber (tracheid) length distributions in the standing tree based on increment core samples. Two types of data can be used with the package, increment core data measured by means of an optical fiber analyzer (OFA), e.g. such as the Kajaani Fiber Lab, or measured by microscopy. Increment core data analyzed by OFAs consist of the cell lengths of both cut and uncut fibres (tracheids) and fines (such as ray parenchyma cells) without being able to identify which cells are cut or if they are fines or fibres. The microscopy measured data consist of the observed lengths of the uncut fibres in the increment core. A censored version of a mixture of the fine and fiber length distributions is proposed to fit the OFA data, under distributional assumptions (Svensson et al., 2006) <doi:10.1111/j.1467-9469.2006.00501.x>. The package offers two choices for the assumptions of the underlying density functions of the true fiber (fine) lenghts of those fibers (fines) that at least partially appear in the increment core, being the generalized gamma and the log normal densities.
Create a forest plot based on the layout of the data. Confidence intervals in multiple columns by groups can be done easily. Editing the plot, inserting/adding text, applying a theme to the plot, and much more.
Forensic applications of pedigree analysis, including likelihood ratios for relationship testing, general relatedness inference, marker simulation, and power analysis. forrel is part of the pedsuite', a collection of packages for pedigree analysis, further described in the book Pedigree Analysis in R (Vigeland, 2021, ISBN:9780128244302). Several functions deal specifically with power analysis in missing person cases, implementing methods described in Vigeland et al. (2020) <doi:10.1016/j.fsigen.2020.102376>. Data import from the Familias software (Egeland et al. (2000) <doi:10.1016/S0379-0738(00)00147-X>) is supported through the pedFamilias package.
This package provides plugins for setting up fiery apps as a reverse proxy. This allows you to use a fiery server as a front for multiple services or even work as a load-balancer.
Many statistical models and analyses in R are implemented through formula objects. The formulaic package creates a unified approach for programmatically and dynamically generating formula objects. Users may specify the outcome and inputs of a model directly, search for variables to include based upon naming patterns, incorporate interactions, and identify variables to exclude. A wide range of quality checks are implemented to identify issues such as misspecified variables, duplication, a lack of contrast in the inputs, and a large number of levels in categorical data. Variables that do not meet these quality checks can be automatically excluded from the model. These issues are documented and reported in a manner that provides greater accountability and useful information to guide an investigation of the data.
Fast censored linear regression for the accelerated failure time (AFT) model of Huang (2013) <doi:10.1111/sjos.12031>.
This package provides tools to study lineages, grandparenthood, loss of close relatives, kinship networks and other topics in multi-generation populations.
Calculation of AHP (Analytic Hierarchy Process - <http://en.wikipedia.org/wiki/Analytic_hierarchy_process>) with classic and fuzzy weights based on Saaty's pairwise comparison method for determination of weights.
This package provides a fast and flexible implementation of Callaway and Sant'Anna's (2021)<doi:10.1016/j.jeconom.2020.12.001> staggered Difference-in-Differences (DiD) estimators, fastdid reduces the computation time from hours to seconds, and incorporates extensions such as time-varying covariates and multiple events.