Tool within FSL for identifying and analyzing clusters in neuroimaging data, particularly useful for statistical thresholding and inference.

Topup is a tool within FSL that corrects for susceptibility-induced distortions in echo planar imaging (EPI) data.

FSL is a comprehensive library of analysis tools for FMRI, MRI and diffusion brain imaging data.

This meta-package provides all the FSL modules.

Basisfield is a tool within the FSL (FMRIB Software Library) used to model and correct B0 field inhomogeneities in MRI images, which can cause geometric distortions. It is essential for improving image quality and precision in both clinical and research applications.

MCFLIRT (Motion Correction using FMRIB's Linear Image Registration Tool) is a tool within FSL designed to perform motion correction on fMRI data.

Tool within FSL for automated segmentation of subcortical brain structures from MRI images, aiding neuroscience research.

Eddy is a tool within FSL that corrects for eddy current distortions and head movements in diffusion MRI data.

This library is likely a component of FSL dedicated to the analysis and visualization of cortical surface data in neuroimaging studies.

This package is a build dependency of all FSL modules.

Verbena is a Bayesian Inference tool for quantification of perfusion and other haemodynamic parameters from Dynamic Susceptibility Contrast perfusion MRI of the brain.

Module within FSL that provides advanced functionalities for FEAT (FMRI Expert Analysis Tool), including pre-processing steps, model setup, and statistical analysis for fMRI data.

Tool within FSL for FMRIB's Local Analysis of Mixed Effects, used for higher-level analysis of fMRI data, providing robust statistical modeling.

A library that returns the object representing an image/volume once it has been deserialized by the newnifti library. The library implements a data container and common operations for nifti images/volumes

The bet2 module in FSL is a brain extraction tool that removes non-brain tissue from MRI images, aiding in isolating the brain for further analysis.

The meshclass module in FSL provides the Mesh class for representing and manipulating 3D models made of triangles, supporting various geometric operations and querie

Tool within FSL designed for fieldmap-based correction of geometric distortions in EPI images, crucial for accurate fMRI analysis.

Tool within FSL for FMRIB's Improved Linear Model, used for statistical analysis of fMRI data, enhancing accuracy and reliability.

Module within FSL that provides advanced functionalities for simulating MRI data, including pulse sequence generation, signal generation, noise addition, and image reconstruction.

FNIRT (FMRIB's Non-linear Image Registration Tool) is a tool for non-linear registration of brain images, used to align images from different subjects or modalities.

Library or collection of resources supporting FIRST, FSL's tool for automated segmentation of subcortical brain structures, enhancing its functionality and accuracy.

Giftiio is a library within FSL for reading and writing GIFTI files, a format used for surface-based data representation in neuroimaging.

Warpfns is a set of functions within the FSL (FMRIB Software Library) used for handling and applying spatial transformations (warps) to MRI images.

Module within FSL that facilitates input/output operations using VTK (Visualization Toolkit), enabling advanced visualization and data handling for neuroimaging.

Module within FSL that provides advanced functionalities for noise reduction in MRI data using nonlinear filtering techniques.